Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Arf1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ADP-ribosylation factor 1
Also known as -
Coordinate chr11:59102238-59119093
Strand -
Gene summary Enables GTP binding activity and magnesium ion binding activity. Involved in mitotic cleavage furrow ingression. Acts upstream of or within vesicle-mediated transport. Located in Golgi apparatus; cytosol; and sarcomere. Part of protein-containing complex. Is expressed in several structures, including cardiovascular system; genitourinary system; gut; integumental system; and nervous system. Human ortholog(s) of this gene implicated in periventricular nodular heterotopia. Orthologous to human ARF1 (ADP ribosylation factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Arf1

Retroname Coord Strand Genomic Region ENSG
Arf1P3 chr13:18134876-18135934 - Intergenic
 ENSMUSG00000114077 UCSC
Arf1P1 chr1:43927136-43928878 + Intergenic
 ENSMUSG00000100701 UCSC
Arf1P5 chr18:80002142-80003800 + Intergenic
 ENSMUSG00000117813 UCSC
Arf1P2 chr12:69419603-69419791 + Intergenic
 N/A UCSC
Arf1P4 chr18:47003815-47005195 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001130408.1
GGGCGCGCTGAGGCCGAAACTGGGGAGGCCGCGGGCTGGTCATCGTGGGAGTCAAGGGGGCGCTCAGCTGCGGCTGCTAAGGACCGAGTCCGGTCGGGCGGCCTGAGGTCTATGCTCAGTGAGCTCGGCGGCAGGCCGGACAGAGGATCGGGACGCCCCGGAGTCCCGCGTCGCCCACGGCCGCTTGGCCCTCCCCCACTCCGCGGCCCTTACGCCTGCCTGGCCGCCCGCCGCGGGCCGCAGCCCGGAAGTCCGGCCAGGACGCCGGCTCTTCTCCAGGAAGCCAGGTCTTTGGCCAGTATCGATTCCACCTGTCCACAAACATGGGGAATATCTTTGCAAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATTCTCATGGTGGGCCTGGATGCTGCAGGGAAGACAACAATTCTATACAAACTTAAGCTGGGCGAAATTGTGACCACCATTCCCACCATTGGTTTCAATGTGGAGACTGTTGAATACAAGAATATCAGCTTCACCGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTGTGGCGCCACTACTTCCAGAACACCCAAGGCTTGATCTTCGTAGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAAGAGCTCATGAGGATGCTAGCTGAAGATGAGCTCCGAGATGCTGTTCTCTTGGTGTTTGCCAACAAGCAGgaCCTCCCCAATGCCATGAATGCGGCCGAAATCACAGACAAGCTGGGGCTGCACTCTCTACGCCACAGGAACTGGTACATTCAGGCCACCTGTGCCACCAGCGGGGACGGGCTCTATGAAGGACTAGATTGGCTGTCTAATCAGCTCCGGAACCAGAAGTGAACCagacccctccctccccctcacttCCTCTTCTCCGCCCTCAGCTTTCCTCTCATGTGGCAAACGTGCGACTCTGTGGTCCTGAGTGCCAGAAGCTGTCTCCATGGGTTGGTCACAGTGTGCATCGCACCGTGCTGTACATGTGCAGACGCAGCCTGCAGCCAggtttttatttaatgtaaatagtttctgtttccactgagGCAGTTTCTGGTACTCCTATGCAATATTACTTAGCTTTTTTATTGTAAAAAGAGAATCAACTCAACTGTCAGTACTGAGAAGGGATTTGGGTGTAGGGGCACCTGGCCTCCGGGAGCCATTGGGCTGTAGACTGGTGTCGGTATCCATTTGGTGGTTGGTTTTTAACCCAAACTcagtgcattttttaaaaatagttaaaaatacaGGACAAGAACACTTGAACACACAGAACGGAGACTATGCCTAGTGTAGGTTTTGCAGTTAATGGCCTGAATGCTAGATATCAGATCACCTGTTTCGCTGTGGGAACAGGAGAGAAGGTGATGAACAAACCACCATCCGCTGCATGGTCACAGTAGAGCCCCCGTGACTCGCCTGTCTTTGGGTCACCTGCATTCCATAGCATTGTGCTTGTACTTGTGCTCACACGGTTACCTAGGGTAGGCTGGGAGCCATTGTGGGGTGCAGGGCCTGGCTTGTACTTGGTGTGTGCAAGGCCCAATGGCAGCCTGCATACCCAGCCTACTCTTGGGCCCACTTGGACGCGCTGGCAGGAGGCCTGGGTCTCACCAGCAGGAGTGCGTGCAAGGTGGGAGGGTCGGTCCATTACAGACCCACATCCTGGAGCACCCCCATCTCCATGTGTGAAGTAGCTTCCTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAGACGAcctctacttttttcttttgtattttgataAACACTGAAGAAGCTGGAGCTGTTAAATTTATCTTGGGGAAATCTCAGAACTGGTTTATTTGGTGTCGTGGAACCTCTTACCGCTTTCAATACACAATTAGTAATCAACTGTTTTGTATActtgttttcagttttcatttcGACAAGCACTGTAATTATAGCTGTTAGAATAAAGTCTCTTAACTATTTG
>NM_007476.3
GGCGTGCCCCGCGGCAGGCGCTGACGTGGCTGCCGTCAGCGCCGCCATCTTGTGGGAGCGAAACCAACGCCTGGCTGGGAGCAGCCGCCGCGGAGGTCTTTGGCCAGTATCGATTCCACCTGTCCACAAACATGGGGAATATCTTTGCAAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATTCTCATGGTGGGCCTGGATGCTGCAGGGAAGACAACAATTCTATACAAACTTAAGCTGGGCGAAATTGTGACCACCATTCCCACCATTGGTTTCAATGTGGAGACTGTTGAATACAAGAATATCAGCTTCACCGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTGTGGCGCCACTACTTCCAGAACACCCAAGGCTTGATCTTCGTAGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAAGAGCTCATGAGGATGCTAGCTGAAGATGAGCTCCGAGATGCTGTTCTCTTGGTGTTTGCCAACAAGCAGgaCCTCCCCAATGCCATGAATGCGGCCGAAATCACAGACAAGCTGGGGCTGCACTCTCTACGCCACAGGAACTGGTACATTCAGGCCACCTGTGCCACCAGCGGGGACGGGCTCTATGAAGGACTAGATTGGCTGTCTAATCAGCTCCGGAACCAGAAGTGAACCagacccctccctccccctcacttCCTCTTCTCCGCCCTCAGCTTTCCTCTCATGTGGCAAACGTGCGACTCTGTGGTCCTGAGTGCCAGAAGCTGTCTCCATGGGTTGGTCACAGTGTGCATCGCACCGTGCTGTACATGTGCAGACGCAGCCTGCAGCCAggtttttatttaatgtaaatagtttctgtttccactgagGCAGTTTCTGGTACTCCTATGCAATATTACTTAGCTTTTTTATTGTAAAAAGAGAATCAACTCAACTGTCAGTACTGAGAAGGGATTTGGGTGTAGGGGCACCTGGCCTCCGGGAGCCATTGGGCTGTAGACTGGTGTCGGTATCCATTTGGTGGTTGGTTTTTAACCCAAACTcagtgcattttttaaaaatagttaaaaatacaGGACAAGAACACTTGAACACACAGAACGGAGACTATGCCTAGTGTAGGTTTTGCAGTTAATGGCCTGAATGCTAGATATCAGATCACCTGTTTCGCTGTGGGAACAGGAGAGAAGGTGATGAACAAACCACCATCCGCTGCATGGTCACAGTAGAGCCCCCGTGACTCGCCTGTCTTTGGGTCACCTGCATTCCATAGCATTGTGCTTGTACTTGTGCTCACACGGTTACCTAGGGTAGGCTGGGAGCCATTGTGGGGTGCAGGGCCTGGCTTGTACTTGGTGTGTGCAAGGCCCAATGGCAGCCTGCATACCCAGCCTACTCTTGGGCCCACTTGGACGCGCTGGCAGGAGGCCTGGGTCTCACCAGCAGGAGTGCGTGCAAGGTGGGAGGGTCGGTCCATTACAGACCCACATCCTGGAGCACCCCCATCTCCATGTGTGAAGTAGCTTCCTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAGACGAcctctacttttttcttttgtattttgataAACACTGAAGAAGCTGGAGCTGTTAAATTTATCTTGGGGAAATCTCAGAACTGGTTTATTTGGTGTCGTGGAACCTCTTACCGCTTTCAATACACAATTAGTAATCAACTGTTTTGTATActtgttttcagttttcatttcGACAAGCACTGTAATTATAGCTGTTAGAATAAAGTCTCTTAACTATTTG