| Retrocopy Name | Arf1P2 |
|
| Species | Mus musculus | |
| Coordinates | chr12:69419603-69419791 UCSC | |
| Strand | + | |
| Parental Sequence | NM_007476.3 | |
| Parental seq. overlap | 155 bp | |
| Parental seq. overlap (%) | 8.6% | |
| Genomic Region |
Intergenic |
|
| Retrocopy Summary | Arf1P2, located on chr12:69419603-69419791, is a retrocopy of the parental gene Arf1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Arf1 |
| Full Name | ADP-ribosylation factor 1 |
| Also known as | - |
| Coordinate | chr11:59102238-59119093 |
| Strand | - |
| Gene summary | Enables GTP binding activity and magnesium ion binding activity. Involved in mitotic cleavage furrow ingression. Acts upstream of or within vesicle-mediated transport. Located in Golgi apparatus; cytosol; and sarcomere. Part of protein-containing complex. Is expressed in several structures, including cardiovascular system; genitourinary system; gut; integumental system; and nervous system. Human ortholog(s) of this gene implicated in periventricular nodular heterotopia. Orthologous to human ARF1 (ADP ribosylation factor 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Arf1P2 |
| GGAAATGCGGATCCTCATGCTGGGCCTGGACGCAGCCGGCAAGACAACGATCCTGTACAAGTTGAAGCTGGGCCAATCGGTGACCACCATCCCCACGGTGGGCTTCAACGTGGAGACGGTGACTTACAAAAACGTCAAGTTCAACGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGCG |
| >NM_007476.3 |
| GGCGTGCCCCGCGGCAGGCGCTGACGTGGCTGCCGTCAGCGCCGCCATCTTGTGGGAGCGAAACCAACGCCTGGCTGGGAGCAGCCGCCGCGGAGGTCTTTGGCCAGTATCGATTCCACCTGTCCACAAACATGGGGAATATCTTTGCAAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATTCTCATGGTGGGCCTGGATGCTGCAGGGAAGACAACAATTCTATACAAACTTAAGCTGGGCGAAATTGTGACCACCATTCCCACCATTGGTTTCAATGTGGAGACTGTTGAATACAAGAATATCAGCTTCACCGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTGTGGCGCCACTACTTCCAGAACACCCAAGGCTTGATCTTCGTAGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAAGAGCTCATGAGGATGCTAGCTGAAGATGAGCTCCGAGATGCTGTTCTCTTGGTGTTTGCCAACAAGCAGgaCCTCCCCAATGCCATGAATGCGGCCGAAATCACAGACAAGCTGGGGCTGCACTCTCTACGCCACAGGAACTGGTACATTCAGGCCACCTGTGCCACCAGCGGGGACGGGCTCTATGAAGGACTAGATTGGCTGTCTAATCAGCTCCGGAACCAGAAGTGAACCagacccctccctccccctcacttCCTCTTCTCCGCCCTCAGCTTTCCTCTCATGTGGCAAACGTGCGACTCTGTGGTCCTGAGTGCCAGAAGCTGTCTCCATGGGTTGGTCACAGTGTGCATCGCACCGTGCTGTACATGTGCAGACGCAGCCTGCAGCCAggtttttatttaatgtaaatagtttctgtttccactgagGCAGTTTCTGGTACTCCTATGCAATATTACTTAGCTTTTTTATTGTAAAAAGAGAATCAACTCAACTGTCAGTACTGAGAAGGGATTTGGGTGTAGGGGCACCTGGCCTCCGGGAGCCATTGGGCTGTAGACTGGTGTCGGTATCCATTTGGTGGTTGGTTTTTAACCCAAACTcagtgcattttttaaaaatagttaaaaatacaGGACAAGAACACTTGAACACACAGAACGGAGACTATGCCTAGTGTAGGTTTTGCAGTTAATGGCCTGAATGCTAGATATCAGATCACCTGTTTCGCTGTGGGAACAGGAGAGAAGGTGATGAACAAACCACCATCCGCTGCATGGTCACAGTAGAGCCCCCGTGACTCGCCTGTCTTTGGGTCACCTGCATTCCATAGCATTGTGCTTGTACTTGTGCTCACACGGTTACCTAGGGTAGGCTGGGAGCCATTGTGGGGTGCAGGGCCTGGCTTGTACTTGGTGTGTGCAAGGCCCAATGGCAGCCTGCATACCCAGCCTACTCTTGGGCCCACTTGGACGCGCTGGCAGGAGGCCTGGGTCTCACCAGCAGGAGTGCGTGCAAGGTGGGAGGGTCGGTCCATTACAGACCCACATCCTGGAGCACCCCCATCTCCATGTGTGAAGTAGCTTCCTCCCTCAGCCTGCAAGGGTCCGATTTGCCATCGAAAGACGAcctctacttttttcttttgtattttgataAACACTGAAGAAGCTGGAGCTGTTAAATTTATCTTGGGGAAATCTCAGAACTGGTTTATTTGGTGTCGTGGAACCTCTTACCGCTTTCAATACACAATTAGTAATCAACTGTTTTGTATActtgttttcagttttcatttcGACAAGCACTGTAATTATAGCTGTTAGAATAAAGTCTCTTAACTATTTG |
| PMID - Link | Title |
|---|
