Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name FRA10AC1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name FRA10A associated CGG repeat 1
Also known as C10orf4|F26C11.1-like|FRA10A|NEDGFC
Coordinate chr10:93667883-93702959
Strand -
Gene summary The protein encoded by this gene is a nuclear phosphoprotein of unknown function. This gene contains a tandem CGG repeat region within a CpG island that normally consists of 8-14 repeats but can expand to over 200 repeats. The repeat region is within the 5' UTR of some transcript variants, but is intronic to another variant. The expanded repeat allele is a fragile site and becomes hypermethylated, causing a reduction in gene expression. A disease phenotype has not been associated with expanded alleles. This gene is found within the rare FRA10A folate-sensitive fragile site. [provided by RefSeq, Dec 2016]

Retrocopy(s) from FRA10AC1

Retroname Coord Strand Genomic Region ENSG
FRA10AC1P1 chr3:162402796-162403052 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001347713.2
GGAAGTGGTGCCCAGTCGGGACCCGTAGGGAGAGGCGGGTTGCGggcggcggcggcggcggcggcggcggTGGTGGTTGTGGCGAGGCTGTGCGGCAGGGCGCACGGGACCTGTGCTGCAGCGGCTCTCTCAGGCCGTGGGTCGTCGCTGCAGCTGCCGGGAAAGAAGGAAACGACGACTCCGGGGGCGAACTTGGCACACAGGGAGGAAGGGAAAGGCTGTCCCCCATCAAGATGTAAAGAACGTGAGGACATAGGACAAAGAGTGAGAGGACAATATGGCTTGAACAGATGTGGTAAGACAGCTGGAGTTGACCTAAAAAAGGGTGTAAAATCCAGATGCATGGTCATGGAGGCTATGATTCTGATTTTAGTGATGATGAACGCTGTGGAGAATCCAGCAAAAGGAAAAAAAGGACAGTTGAAGATGACTTACTGCTCCAAAAACCATTTCAGAAAGAAAAACATGGAAAGGTGGCCCATAAACAAGTTGCAGCAGAATTGCTGGATAGGGAAGAAGCAAGAAATAGAAGGTTTCATCTCATAGCTATGGATGCTTATCAAAGACATACAAAGTTCGTAAATGACTATATTTTATACTATGGTGGCAAAAAAGAAGACTTCAAGCGTTTGGGGGAAAATGACAAGACAGACTTGGATGTTATACGAGAAAATCATAGATTCCTATGGAATGAGGAGGACGAAATGGACATGACTTGGGAGAAGAGACTTGCTAAGAAATACTATGATAAATTATTTAAGGAATACTGCATAGCAGATCTCAGTAAATATAAAGAAAATAAGTTTGGATTTAGGTGGCGAGTAGAAAAAGAAGTAATTTCAGGAAAAGGTCAATTTTTCTGTGGAAATAAATATTGTGATAAAAAAGAAGGCTTAAAGAGTTGGGAAGTTAATTTTGGTTATATTGAGCATGGTGAGAAGAGAAATGCACTTGTTAAATTAAGGTTATGCCAAGAATGTTCCATTAAATTAAATTTCCATCACAGGagaaaagaaatcaagtcaaaaaaaagaaaagataaaaccaaaaaagaCTGTGAAGAGTCATCACATAAAAAATCCAGATTATCTTCTGCAGAAGAGGCCTCCAAGAAAAAAGATAAAGGACATTCATCTTCAAAGAAATCTGAAGATTCTCTACTTAGAAACTCTGATGAGGAAGAAAGTGCTTCAGAATCTGAACTTTGGAAGGGTCCACTACCAGAGACAGATGAAAAATCACAGGAAGAAGAATTTGATGAGTATTTTCAGGATTTGTTTCTATGAGACGAGAGAGAGAAGCCTCCGCTCCTTAATGTGAAACTTCATGAAGTTTTAAACTTCATGCAATTTGAAATTCCATATAAGTTTTTATCTGCAAGTTACAGCTTGTGTGGTTTGTCTTTGGAAATAAAAATCCAGGTTCTCTCAGAATGTCAGAGGCTTTGGAAGTTCATTAGTTCAATTAAAGACTTTCCTGTCCTTTAAATATCTTTTCAATTGCTTATCTACAATTCTGTTTTATTTGTAGCTCCTAGAGGATAGAGCTGGACAGATTCCATTGTTCCTACATTTTGTAGGTTTTTTTTCACTGCCTTCATTATGTATCTTCTCTTGCCTTCAttattttattttattatttcttctttttctcttttttAGAGCCACCAATACTGGATTTGTTTGTTTTTCATTTTTTTCttttgtggaaacggagtcctcctgtgttgcccaggctggtattcaaactcctggccttatgcattcctcccaccctggcctcccagagtgctgggattacaggtgtgagccaccatgctctgccAATTATTTTAAATTACTAGGATTAAAGTATATTATGTATGTCTTTAACTTCTTTCTTTCCCATTGATAAACTGGCACCCTTCTTTTAAGTACCTGCTCTCCCATTACCACCTATTTCCAGCTGCTTTTTGAGGTTTTTTGCTTGCCTGTCTCTTGCTTCCTTCTTAACCTCTACCACTTAAGAGAGTTTGTTATAATCAAATTTGACTTCCTAGCCTGTGGATAATTTACTATTAAGTAAATTATTACCACAGGGAGCCAGTGAGGTCCCAGTAGTCTAAAACAGTTCATGTGTTCACAAAAATTGCCTCCCCGGCAGAGATTATGCAGTAAGATAATTTAACTGAATAATACTATGTGCATGTATCTTGCCTCAGATATACTCATGCAAATATGAATATACCTCtgatatggtttggctctgtgtccccacccaaatctcatcttgaatgtgtactcccataattcccacattttataggagggatccagtgagagataatttgaatcaagggggcggtttcccccatattgttcttgtggtagtgaataagtctcacaagatctgatggttttatcaggggcttctgcttttgcatccttctcattttcttttgctgctgccatgtaagaagtgccttttgcctcccaccatgattctgaggctttcccagccatgtggaactgtaagtccaattaaacctctttttcttccccagtctctggtatgtctttatcagcagtgtgaaaatggactaataGAACTTCTATGCAGAAATATAAAATGTAACTTCTTAACATAAGGTCCTAGTCGCAAgggtctatggaggtgcttcaggagatccaagcctttttagaatctgtgcaaacttctgtgtatgttttttggaggaaaagtccataaatttcaaattttcaaaaatcagattttcaaaaggatTTATTGATTTCTGAAAACTAGCAAAGATCTGCTTTTATAAAGAGCAAATAGATGGATAGATATAGGAGAAGATGCTTGACTTGATGAATAAGAGAAAGGACATATAGAAAATGAACTGAACATAAGCAAGTATTTTATTGAAGATATACTATTTTAAATAACATTTAAACACGGAATGATTGGCAATAAACTGCAAAATGAGTAATTTGGTATCATTTTAAAATGGTTATTATCAGAGATTTTCCTTTTATTAAACAGTTattcattaattccacaaatatttatcaggcttctattatatgtgaggcactgagctgggcATGGCTGTAAAGGAACCATCTAGGAAGTAATTATGCAATCATTTCTGAACCTGTTTCAGAAAAGTAAATCAGTGTTGGGTTTATCAGTGTTTAACATTGTTTGATAGTCCCCTCACTTCTTGAATAAATTGTTTTTTTTCACCTCA