Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp6v1a
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATPase, H+ transporting, lysosomal V1 subunit A
Also known as Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2
Coordinate chr16:43905765-43960064
Strand -
Gene summary Enables proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in cellular iron ion homeostasis; cellular response to increased oxygen levels; and proton transmembrane transport. Predicted to act upstream of or within ion transport. Located in apical plasma membrane; cytosol; and microvillus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; heart; and sensory organ. Human ortholog(s) of this gene implicated in autosomal recessive cutis laxa type IID and developmental and epileptic encephalopathy 93. Orthologous to human ATP6V1A (ATPase H+ transporting V1 subunit A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp6v1a

Retroname Coord Strand Genomic Region ENSG
Atp6v1aP1 chr13:78269156-78272789 + Intragenic
ENSMUSG00000114622 UCSC

Expression

Transcript Sequences

>NM_007508.6
CCTCGTCTTCTGTACTGTAGTTTCTGTAACCCCcgtcattgtaaaaaaaaaaagaaaaagaaaagaaaaagaaactaacgCTTTTCTGAAGTCGCGGAACCATTCACATCCAAGGCGGTCCGCAAAGATTTAAGCCTGCGAGACGCGGCGTGACGGGCGAGGGGAAGCGGGGTGGGGCTTGAGGACACATGACTAGCTAGGACTGGCCCGCCTCCTGCAGCTGAAGACTTCCCCTCTCTCAGTGACAGAGCCTCTGGGTCCCGTCTAGGTACACTTTCTGCATTTCGAGCCCGGGCAGGTAAATTTAACACAATGGATTTCTCCAAGCTACCCAAAATCCGAGATGAGGATAAAGAAAGTACATTTGGTTATGTGCATGGAGTCTCAGGGCCTGTGGTTACAGCCTGTGACATGGCGGGCGCTGCCATGTACGAGCTGGTGAGAGTGGGGCACAGCGAGCTGGTTGGAGAAATTATTCGATTGGAAGGTGACATGGCCACCATTCAGGTGTATGAAGAAACTTCTGGTGTCTCTGTTGGAGACCCCGTACTCCGCACTGGTAAACCTCTCTCGGTCGAGCTGGGTCCCGGGATTATGGGAGCCATTTTTGATGGTATACAGAGACCTCTGTCGGATATCAGCAGTCAGACCCAAAGTATCTACATCCCCAGAGGAGTCAATGTGTCTGCTCTCAGCAGAGATATCAAATGGGAGTTTATACCCAGCAAAAACCTACGGGTTGGTAGTCATATCACTGGTGGAGACATTTATGGGATTGTCAATGAGAACTCCCTCATCAAACACAAAATCATGTTGCCCCCACGTAACAGAGGAAGCGTGACTTACATCGCGCCGCCTGGGAATTATGATGCATCCGATGTCGTCCTGGAGCTTGAGTTTGAAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCGGCAGGTGCGGCCTGTCACTGAGAAGCTGCCCGCCAATCACCCCTTGCTTACTGGCCAGAGAGTCCTCGATGCCCTTTTCCCGTGTGTTCAGGGAGGAACTACTGCTATCCCAGGCGCCTTTGGCTGTGGAAAGACTGTGATTTCCCAGTCTCTATCCAAGTACTCCAACAGTGACGTCATCATCTATGTCGGCTGCGGTGAGAGAGGCAACGAGATGTCAGAAGTTCTCCGCGACTTCCCTGAGCTCACCATGGAGGTTGATGGGAAAGTAGAGTCCATCATGAAGAGGACAGCGCTGGTAGCCAACACCTCCAACATGCCTGTGGCTGCGAGAGAGGCCTCCATCTACACTGGAATTACACTATCAGAATATTTCCGTGACATGGGCTACCACGTCAGTATGATGGCCGACTCTACCTCTAGATGGGCTGAGGCCCTCAGAGAAATCTCTGGTCGCTTAGCTGAGATGCCTGCAGaTAGTGGATACCCTGCATACCTTGGTGCCCGGCTGGCTTCTTTCTATGAGCGAGCAGGCAGAGTGAAATGTCTCGGAAACCCTGAGAGAGAAGGGAGTGTCAGCATTGTAGGAGCAGTTTCTCCACCTGGTGGTGATTTTTCTGATCCAGTCACTTCTGCAACGCTGGGTATTGTTCAGGTGTTCTGGGGCTTGGATAAGAAGTTAGCTCAGCGCAAGCACTTCCCCTCTGTCAACTGGCTCATCAGCTACAGCAAGTACATGCGTGCCCTGGACGAGTACTATGACAAGCACTTCACGGAGTTTGTTCCTCTGAGGACCAAAGCTAAGGAGATCCTGCAGGAAGAAGAGGATCTGGCAGAAATCGTGCAGCTCGTGGGAAAGGCCTCTTTAGCAGAGACGGATAAAATCACTCTGGAGGTAGCAAAACTTATTAAAGATGACTTCCTACAGCAAAATGGGTACACTCCTTATGACAGGTTCTGTCCATTCTACAAGACAGTGGGGATGCTGTCCAACATGATTTCATTCTATGACATGGCCCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACAATAAGATCACATGGTCCATTATCCGGGAGCACATGGGGGAGATTCTCTATAAACTCTCCTCCATGAAATTCAAGgatcCAGTGAAAGATGGCGAGGCAAAGATCAAGGCCGACTATGCACAGCTTCTTGAAGATATGCAGAATGCATTCCGTAGCCTTGAAGACTAGAACTGTGATTTCTTCCCTCTTCCACGGCAAGCTCATACGTGTATATTTTCCTGAATTTCTCATCTCCAACCCTTAGCTTCCATATTGTGCAGCTTTGAGACTAGTGcctatgtgtgttcttgttcattttgctgtttctttggtAGGTCTTATAAAACAAACATTCCTTTGTTCCAGTGTTTGAAGGAGCTAGCTCCCTTACCTTTATCTGAAGTGGTGAATGTAGTGCATATGATATACATTGTAAGATACACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCCCTCATCTCCAGTAAACTGTAAACAGGACTACTGCATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTTAGGAAACAACTCAGCATTTGTAGTCAGACCACTTGTAACTTAGTGGTTTGTTGAGTAACCATTTTGCAGGAAATACttccatttaaaaacataaaagattaATGTTCCAATTATTTGTATCAATCAGGACCATTTTTGTGGGGCACTTGGGAACTATTTGTTTTTCAAACAGACATTTGCAAGACTGAACATAATAGATAAATCAGTTACCTCTGAAAatgtgaaagaaaggaaaaaaaaaagaaccaggtgGTCAAACTTAAATTGACATCATCTTGTTAAAGCATATTTTATTTCACTAAGAGAAATTTAATATCAGAGACTTTTATATACTCAATTACTAGAAAACCTTTTTTTTAAGTacaatttaaaaatcattgaaaatgtgATCCACATCATAGccattcttttcctcagacttagTCAGACAAGCTTCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCACTGCTGTAGGAGTTTGGGGCCAGGGTGGCATGGTTTTCACAAGGTACACGTGTCAcgtgtttgtttgcctgttgaCATTCTGAAAACAGCAAGTTTACCAATTGCAGAAaatactttctgttttctctttcacaTGCTCAGAAAGCTTCTCAAAGGTATCTGGTCACAGCAGCTTCCTTCCTGTTATAGAGGTAAAAGGTGTTCTTATATTTAACtggtaacaaaagaaaaaagaaaaaagaaaagatcaattTTTGTCTTGATGTTTCAGTGTGTTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGCGAGCGAGCTCCCTGTTCACTCTCTCCAGCTGATAGTGCTGTCAGTATACACTTCAGATGTAATGTGTAAATCCTTGCTGGTGCATGTCTACACAGTGGACTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGGATTATGCAATGGCTTGTTGGGAGGTGGATTAGTGGTGCTGCTTAATCGGTTTGCTTCCAATGTGGCTTCGTATCCAGGAGCCCTGACTAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCTAGGCTTGTGATCAGAATGAATGATCCCAAGAAACTACTTGAccaagtttgtttttgttgtcctGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGTTGATGTATGAGTGTGAAGAGGCTACAGAAACAATGCCCAGATTTTCACTGTAACTTTCCCTTTGCCCACACTGTAGAACTTGAGATTGTTCACTGATAGTGCGTCTTTAGTAAGGATGTGTTAAAATATAGcagtctttttaaaagattatgcAGTTCTCTATTTATTGTGCTGTGCCTGGTCCTAAGTGCAGCCGGTTAAACAAGTTTCATATGTATTTTTCCAGTGTTAAATCTCATACCTATTCCCTTTGGAAACTTCCATCCTGAACAATGAATAGAAGAGGCTATATAAATTGCCTCCTTATCCTTAAGATTTCACTATCTTTATGTTAAGAGTAATGTATAATTATTAAaatctatgaaaaataaaaagtggatttaaatt