RCPedia: Genes

Summary

Gene Name	Chuk	Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	conserved helix-loop-helix ubiquitous kinase
Also known as	Chuk1\|Fbx24\|Fbxo24\|IKBKA\|IKK alpha\|IKK1\|Ikka\|NFKBIKA
Coordinate	chr19:44061773-44095938
Strand	-
Gene summary	Enables protein kinase activity. Involved in positive regulation of interferon-alpha production; protein phosphorylation; and response to virus. Acts upstream of or within several processes, including mammary gland development; osteoclast differentiation; and positive regulation of I-kappaB kinase/NF-kappaB signaling. Located in cytoplasmic side of plasma membrane. Part of CD40 receptor complex. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; hemolymphoid system gland; and limb. Used to study fetal encasement syndrome. Human ortholog(s) of this gene implicated in fetal encasement syndrome and prostate cancer. Orthologous to human CHUK (component of inhibitor of nuclear factor kappa B kinase complex). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chuk

Retroname	Coord	Strand	Genomic Region	ENSG
ChukP1	chr16:55702398-55704793	-	Intragenic	ENSMUSG00000116919	UCSC

Expression

Transcript Sequences

>NM_001162410.1
GAGACGGAGGACTCCGCAAGCCTCGGCGGCCCGGAACCGGCCTTAGACCGGCGGCGTTGCCTGAGGCGGCTGGCGCTCCCGCCCCATGGAGCGGCCCCCGGGGCTGCGGCCGGGCGCGGGCGGCCCCTGGGAGATGCGGGAACGGCTTGGCACCGGCGGTTTCGGGAACGTCAGTCTGTACCAGCACCGGGAACTTGATCTCAAAATAGCAATTAAGTCTTGTCGTTTAGAGCTAAGTTCCAAAAACAGAGAGCGATGGTGCCATGAAATCCAGATCATGAAAAAGTTGGACCATGCGAATGTTGTAAAGGCCTGTGATGTCCCTGAGGAATTGAACTTTTTAATTAACGATGTGCCTCTTCTGGCAATGGAGTACTGTTCTGGAGGGGACCTCCGGAAGcTACTCAACAAACCAGAAAATTGTTGTGGACTTAAAGAAAGCCAGATACTTTCTTTACTGAGTGACATAGGATCTGGGATCCGATATCTGcatgaaaacaaaattatacaTCGAGATCTAAAACCTGAAAATATAGTTCTTCAAGATGTTGGTGGGAAGacaatacataaaataattgatTTGGGTTATGCCAAAGATGTTGATCAAGGAAGTCTCTGTACATCTTTTGTGGGAACATTGCAGTATTTGGCCCCAGAGCTCTTTGAAAATAAGCCGTACACAGCCACTGTGGATTATTGGAGCTTTGGGACCATGGTGTTTGAATGTATTGCTGGATATAGGCCTTTTTTGCATCATCTGCAGCCATTTACCTGGCATGAGAAGATTAAGAAGAAAGATCCAAAGTGTATATTTGCATGTGAAGAGATGACTGGAGAAGTTCGGTTTAGTAGCCATTTACCTCAGCCAAACAGCCTTTGTAGtttaATAGTAGAGCCAATGGAAAGCTGGCTCCAATTGATGCTGAATTGGGACCCACAGCAGAGAGGGGGACCTATTGATCTTACTTTGAAGCAGCCAAGATGTTTTGCATTAATGGATCACATTCTCAATTTAAAGATAGTGCACATCCTAAATATGACTTCTGcaaaaatcatttcttttctgttaccATGTGATGAAAGTCTTCATTCACTACAGTCTCGAATTGAGCGTGAAACAGGAATAAATACAGGTTCTCAGGAGCTTCTGTCAGAGACAGGGATTTCTCTGGATCCTCGGAAACCAGCCTCTCAGTGTGTTCTAGATGGAGTTagaGGCTGTGATAGCTACatggtttatttgtttgataaAAGTAAGACTGTATATGAAGGACCATTTGCATCCAGAAGTTTATCTGATTGTGTAAATTATATTGTACAAGACAGCAAAATACAACTGCCAATTATACAGCTGCGGAAAGTATGGGCTGAAGCAGTGCACTACGTATCTGGGCTAAAGGAAGACTACAGCAGGCTCTTCCAGGGACAAAGAGCAGCAATGTTAAGTCTTCTTAGATATAATGCTAACTTGACAAAAATGAAGAATACTTTGATCTCAGCATCACAGCAACTCAAAGCTAAATTGGAGTTTTTTCGAAAAAGCATTCAGCTTGACTTGGAGAGATATAGTGAGCAGATGACTTATGGGATATcttcagaaaaaatgttaaaagcatggaaagaaatggaagaaaaggcCATTCACTATTCTGAGGTTGGTGTCATTGGTTATCTTGAGGATCAAATTATGTCTTTGCACACTGAAATCATGGAGCTGCAGAAGAGCCCCTATGGACGACGCCAGGGAGACTTGATGGAGTCTCTggAGCAGCGTGCCATTGATCTCTATAAGCAGCTAAAGCACAGACCTCCTGATCACTTGTACAGCGACAGCACAGAGATGGTGAAGATCATCGTGCACACCGTGCAGAGTCAGGACCGTGTTCTCAAGGAGCTGTTTGGTCACCTGAGCAAGTTGTTGGGCTGCAAGCAGAAGATTATTGATCTACTCCCCAAGGTGGAAGTGGCCCTCAGTAACATCAAAGAAGCTGACAATACTGTCATGTTTATGCAgggaaagaggcagaaagaaattTGGCACCTCCTTAAAATTGCCTGTACACAGAGTTCTGCCCGCTCTCTTGTAGGATACAGTCTAGAAGGCACAGTAACCCCTCCAGTATCAGCATGGCTGCCCCCTACATTAGCAGACCGTGAACATCCTCTGACATGTGTGAGAGACGTTAGCacaaatgatagaagaaaatctGAACTGTCTTGGCCATTTAAGTACTATTATTCGTGAAGCAAATGAGGACCAGAGCAGTAGTTTGATGAGTCTTGATTGGAGTTGGTTAGCAGAATGACTCGACACTCGTTTACTGTCCTGGAGCCTACGAAGCTGTTTTGTCATTTACTCCAAAGTCATCTTTACTTGCTGAAGCCATTCCTCACTTACCAGTCCGTGAGGAGATGGCTGTGATCGGAAACTACGAGTGACTTTACAAGCACAgtagcttggtgttttgtttgtttctaataaTTATGATCTCTGAACAGATAGAATTTTATAGCAAATTAGTGAaattaattattctttttaacacCGCAACTAATGAGGGAGATCATTAGTGACCTGCTTATCttataaaattggaaaaatacTACTACTAGTTTAGCTGATGAAAAAGATAATCTTCTAAAGGCCTAAATTTTCGGCATAAGGCCCAACATGGTATTAGTATACAGGAATGAAAAATTCACCCAGTGTTCATTTGAAGTAAAGTTTTATCTATGGGTTTTCTGTGGAAGAGACTGCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTGTTGCTCTCAGCAAGTGTTCTTCATGGCATCACATGGAGTCAGATGAATCCCATCTTTAATCACACATTTAATAGAGTCCTTTTCCTGTGTAAGGGGTTGGACTTTTGTGCCTTTGATATCAGCTGACCATAATGAATTGTGTTGTgtgctatatgtatatgtatttaaggTGTACATTTAATAATATCAAAGAGAAGATGCCTGTTAATTTATAATGTATTTGAAGGTTGTATTGTTTTTGCATTTGTAAAAATGGGTTACTTGTTTAAACAATCTTTTATGTCTTGTCATACAAATTCCAAAGGGTCTGCATTCCTTTATCTGTAATTACAGTCTCAGAATCCAAGTTCTGAAAACAAGGTATCTATTCTGATCTGACACTGGATCTGCTTATCCCATTTAGTGTGAATATTCATTGATTTATGTGTTTGATTATTGGGATGTGCTGCCACAGGCTCTCTTGAAGGTTGATGTAGTGTGGCGTATGCACTGAATTACCTTTCTAAAATCTGAACAGTTCTCATTCTGAAACATCTAGACTTAAGGGTTTCAGATAAAAGACTGCGGTTCTCTGCCTTATGTTAAATAACTTAGAAGATGttattttgtttgaaaaaatGTGAAATGCTTTTATATTCTAGTTTTTCACTTTGCatattaaatgattttaaaattat