Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ddx6
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Also known as 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck
Coordinate chr9:44514113-44552028
Strand +
Gene summary Predicted to enable mRNA binding activity and protein domain specific binding activity. Acts upstream of or within negative regulation of neuron differentiation and stem cell population maintenance. Located in P-body. Is expressed in several structures, including brain; early conceptus; neural tube; oocyte; and trunk somite. Orthologous to human DDX6 (DEAD-box helicase 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx6

Retroname Coord Strand Genomic Region ENSG
Ddx6P1 chr2:24068518-24071217 + Intergenic
ENSMUSG00000083116 UCSC

Expression

Transcript Sequences

>NM_181324.3
TTTTGGGAGCTTCGAGTCAACAATAAAGGACCGAGGGTGCGGAGCGGGAGTGGCCTCGGTGatTGAAGTGAGTGAATTCAGATATAATTCAAGCTTGTTagagggctttaaaaaaaaaagttgattcgGTGCATGAAAGCAAGTTAACTACTGCTGCTCACCGTTGAGAGACTTACAGGTGCTTGCCTGAACTGCAATAAAGGACTCATATTATTGAGCAGGACTTATTTATCTCTTCATTTTGGAGAGCCTCATAAACTGTTATTACAGTTTCTCTACTGACTTTGAAAAGTTTGAAGTTTGGAAGAGACACCTGTGCAGCTAACAAAGCATGAGCACGGCCAGAACAGAGAACCCTGTTATCATGGGTCTGTCCAGTCAGAACGGCCAGCTGAGGGGCCCTGTGAAGGCCAGTGCTGGCCCTGGAGGAGGGGgcacacagccacagccacagctgaACCAGTTGAAGAACACCAGCACAATCAATAATGGCACTCCACAGCAAGCCCAGAGCATGGCCGCCACTATTAAACCTGGTGATGACTggaaaaagacattaaaactcCCTCCAAAGGATCTAAGAATCAAAACTTCGGATGTGACCTCCACAAAAGGAAATGAGTTTGAAGATTACTGTTTGAAACGAGAGTTGCTAATGGGAATTTTTGAAATGGGCTGGGAAAAACCATCTCCTATCCAGGAGGAGAGCATTCCCATTGCTTTATCTGGTAGGGATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAAAGCGGTGCCTACCTCATCCCCTTACTTGAAAGGCTGGACCTGAAGAAGGACAATATTCAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAGATTTGCATCCAGGTCAGCAAACACATGGGAGGGGCCAAAGTGATGGCAACCACCGGAGGAACCAATTTACGAGATGACATAATGAGGCTTGATGATACAGTGCATGTGGTGATCGCTACCCCTGGCAGGATCCTGGATCTCATCAAGAAAGGCGTGGCAAAGGTTGACCATGTCCAGATGATAGTGCTAGATGAGGCAGATAAATTGTTGTCACAGGATTTTGTGCAGATAATGGAGGATATTATTCTCACACTACCTAAAAATAGGCAGATTTTACTATACTCCGCTACTTTCCCTCTTAGTGTACAAAAGTTTATGAATTCCCATCTGCAAAAACCCTACGAGATAAACCTGATGGAGGAACTAACTCTGAAAGGAGTAACTCAGTACTACGCATATGTAACGGAGCGCCAAAAAGTGCACTGCCTCAATACACTTTTCTCCAGGCTTCAGATAAACCAGTCCATCATTTTCTGCAACTCCTCCCAGAGAGTCGAGCTACTCGCCAAGAAGATTTCTCAGCTGGGCTACTCTTGCTTTTATATCCATGCTAAAATGAGGCAGGAACATCGAAATCGTGTCTTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGatcTGTTTACCCGAGGTATTGATATACAAGCTGTGAATGTGGTAATAAACTTTGACTTCCCAAAGCTGGCAGAGACCTATCTTCATCGTATTGGAAGATCAGGTCGCTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACTTATGATGATCGCTTCAACCTGAAGAGTATTGAGGAGCAGCTGGGGACAGAGATCAAACCCATCCCAAGCAACATCGACAAGAGCCTGTATGTGGCAGAATACCACAGTGAGCCTGCAGAAGACGAGAAACCGTAACAAGCACGCTTTGACAAACTACAGAAGGCTCTTTGGATCTGTGACACATCATTTTGGGGGGGTGCTCTtctctttgtgggttttttcatctttattttggaACTATGAAGAGTTATATAAGAGctcagacatttttcttttttttaaactggtgaagaaaaactgaaaagaagacATAGACCTTTTTTGTTCCACTTGTTTGCACTGTGTGCTGACTGAACATTCGTTGCACTAACTGCTGGTCtttaaagatgttttctgggGAAAGGGgacaaggaaggaggaaaagaaaagaaggggagaaaccctaaaaaagagaagaatttgggTGAACACATGCACCTGTCTAAAGTTCTCCACTAGCTGACTCTACTGCATTTCAACTTCTCCCTGATTATTCATCCGTTTTTAAGCCTGAAGAGCTTATTACTTATTTGTGCGAAGTGCCTTATGCTACAAGACCATTAAGAATATCATCTTTACACACAGCCCAAGGAATCAACAGAGTcatgttctattttcttttttatttctttgcctcTTCATTTTGGTTTCACGTTGAAGTCTCACCTCCTGTTCTACCAGTACTCAGCCCAGGGCCGGAAGGTGGACTAGTGatggcagcgccattttccttttctttatatggAGGAGTTGATTCACAACTGCAGTCCATCCACActgtacatacatgtatttaaaaaaaaaaacaataccaaGTAAAATTTTCTTCCGGGCTGAGTAGACGTACCATCGTCGCTCCCAAAGGAAAGAGCAGCCTCTCACTGCAGGAGCCAGATGACAAGCCTCTGTGCTCTACAGCAGAACACTACGCTGGCTCACACGCGTCCATGAGCAGGAAGGCACTCGCTGTAAAGACTTGTCGGAGGGAGCCTTGACCTTCTTTCCTCTGTGGCAAAGCGTGACCCGTAGAAAATTGGATGTGTATACTTGTATAAACTTTGtaaataagttttttttctgggttcatatatatatatatatatataaatatatatatatacatacatatatatatattattttttttggaTGAAGGTTGCTGGGATTAAGGGATTAGAGTGATTATGGGAGCAGCTAAAGATGAGAGGGGCTCAGTTTTCTGCAacactaaattctaaaaagtgCTTTGGCCTCTAACTGTAGGAAGCAGACCTCTGCAGGCTCTGTGTTGGAAAGGGGCCAGAAGCCCGGCCACACTGCTCTTGTAATGAATGCACAGGCAGCGGTCTTAGCAGACAGCAAAGGAGCTTTGCAAGGCTGTGGTCCCTGGGGGCTTTGAGAAGCTCTGTGGTTTGGCTCTCCTGTCCTAAACGTTTGAGGAACTTCCCAAGTTCTGCAAAGGGGAACAAAGATAAATCTTCCTTGGAGTGTGAGAAGTGTACAGAGTGCAGTCTTAGAGGAGAGTGTGTGGAGCATGGATTTTTATGTCACCGGACCAGCCAGTGCAGCCTCGGCGGGCTTGGCAGTTGTGGAGCCTAGTTATCCGCGGCCCCTCCTGTTGTGTGTGAGCAGCGCCCTCTGCCTATCTTGATAAATACATTTTTGCAGGAAGGGGCAGCCCGTTAGAGCTGTTAACGTCCATGTCCATGCTGCAGAAAGCTGCTTGCTGCCCGTTCTCTGTGCCGCACTAAGAGTTGCTGTCTGTCGTTTTGCATTGTAAATCGCTGGCAGATGCCTTAGGTGGTAGTGTTGCTTTAAACTGTGCCCCTCCCAACACGCTTGATGTTTGGCCTGATCTCCAGGCAAAAGGAGGGAGATGAATCAAccagtgaactttttttttaaaaatgtttttaattcccTTTTAACCCAGTATACTAGGTCAGGAGGCATCTAgggaacaaaaaaagcaaaaaacaaaatttaaaaaaaaattgattttcatATTCCATCACTTTGAAGACCTTAAAACTATGACAAGGTATGTTGAGTCTGCTTCCATGCTTAACTCGTCTGAAGAGAGGAGTCAGTTATTCAAAGTTGCTTTGACTTTGCCTAGTTCTAAAGCAAAACTATTTGTGACTTATCCCAAATTCTTTGGGGATCAAAATCCTACAGATGCCTCCTTATCAGAGATAACCCTGACTCTGTAACAACTGTAGCAGGAGCTGCACGGTACAAATCCCCAAAGGCAAGTCCAGTCAAGTGTTGGctacaaaacaaaccaaattaaTAAGGAAGTCACTTTTTTagggagggtgggagtggggtctTAAAAACTCGTTATTTTGACCAACAGATCTTGCCCTTGTACCGATGCAGctctcctccttcctgcctttgGCGAGATGAGGGATCGCTCCGTAGAGCAACATGAGCAGGAAAGGAGTACAAATGCAATCTGCTGTCTCGCCAGAGGGCAAGTGGGTGATCAACAAAGTGCAGTCTCTTGCCAACCTTGGACTGCTCTGCCAGGTGCCACATGCCTCTGAGTCCCTCTTAAAGCACAGACTCCATGGGGGAGTGTTCTGAAGTACAGCCTCTGCTGAGGGTGGCACTTGGACAGCTGGGCACCCACCCCGGAGATCGCTGTCTGAAGAGGCGGTGCTGGGGTGGTGCTTAGCTCACTTGAGCTGTTGTTAATGGGAAGATGCCCTACTGACCAGGTCAAAccctggttgggtttttttgttgtttttttttttttttatcctttttgaTCCCTCTTAATAAGGAATATTGCTACTATTGGAAATTGTCTTTCAGGTTCTTTCcagtaatttttaaagtaatggTTATGTTTTGGTTTTCGCCAGTAGTTCATTTCGATAAAAACTATGTCCTATTTTTAATATCCACCTCAATGCTTTTAGCCTCTGGTCATGTAGTTGTGTGATAAGTAACAGACTGTTACACACTTGCTGCTCAGGGCctgtttttttctctcccttagTGTTCTGAACATGAAAGAAACTTTCTTAGGAATGGAATACATTTACCATAAAATGTTTTTCCTGGAAAGGAAAACCTAAGTAGCTCTAAATTATTTCCAGGTGGGCACCAGCATCATAACAATTGGTTGGcccggtggggtggggtggggtgggctgggtGGGTGGTTGTCATACTCGTTTTCAGAATGAGATGAGGGCATCTTTCCTTGGCCACCTGCTTTGTGCTGGACACCATCGTGCTCGGTGAGAACAGAGCACAGCACAGAGTTTGGAGTGACATGTTGGAAACAAAACATCTCATTCTGAtcatttggtttatttttttttaataggggtgggaggggagggtactGTGTCCCAAAAGGGAGGGTGTCTGCACTAAGGATTTAGAAACACTTTGGAAGCTCATAACCTCATGGGAAACTGCCTTTAGCCACACACACTCCTGACCTTTAGATGAGTAACAAAAAGATGAAATAAGTTTGTGGGAATTAAGCCATGTTATTTTAattggatacttttttttttcaactctctGTGTATCTTTAAAATTGTTACTGTGGAATGATTTTCTTGCCAAATAACTTTGTCAGGCAAAATTATTGGCCTCATGGGAGGTGAAGTAAGCCAGATTTTGGGTAAATTTATGTGGACTTTGGTGAGTTTGTAATTCTACTTTATATTCATAAAGATAGTTTTTTAAAACTCCCAAAGCAAATCTATTTTCTTCTCTAATGTAAAAACTCATCTTTGGAATAAAGAGTTAAGTGTCCGAGGGTTGTAACAGATATGAGGTCAGAGGGAGCTAGCCTGGCCTGGACTCTGCCCCTCCACAGCTGACAGACTCCAACAGAAGTGTATTTAAATCTCCAGTAGACAGAGCTGGGCAGGGCAAGGGAGGGGTGGGCCTGGGTTAGTAAGCTGCAGGCTGCTGTATTTTAACCAGTGGTTCTTGGGGAGGGGTGCTGGAGAATACAAAGTCACTTCCCttttttgaaacaaaacaaattagaaaaaaaccaatttttttgtttagtaaaaataagaaaattctaATGTCCCTAGTCACAAGGGACCAGTTCCACTTTGAGCAGTAGGAActtaaaaatttgaaaacatttgGGGAAAGGGAAAATTGGCTTTCTGTTTAATTGGCAAATGTTCCAGTGGGGAGGGTCTGTTTTTGTTGGGATGTGTTACAGTGTATGTACATGTCTATGGACCTGAGTCTTTAAGGAGTTATATACATGGTTCATTCAGAAAAGATGGTTGGTAAAATCttgattgtttctttttgttaatttatcTCAATAAAAGCCCACTGGAACTTCA