Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name VPS37A
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name VPS37A subunit of ESCRT-I
Also known as HCRP1|PQBP2|SPG53
Coordinate chr8:17246927-17333455
Strand +
Gene summary This gene belongs to the VPS37 family, and encodes a component of the ESCRT-I (endosomal sorting complex required for transport I) protein complex, required for the sorting of ubiquitinated transmembrane proteins into internal vesicles of multivesicular bodies. Expression of this gene is downregulated in hepatocellular carcinoma, and mutations in this gene are associated with autosomal recessive spastic paraplegia-53. A related pseudogene has been identified on chromosome 5. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Dec 2012]

Retrocopy(s) from VPS37A

Retroname Coord Strand Genomic Region ENSG
VPS37AP1 chr5:154493289-154495080 + Intergenic
ENSG00000253886 UCSC

Expression

Transcript Sequences

>XM_017013021.2
ACGCAAGTGACGGCGGCGCGGGTGGTGGAGCGCTGGGCGGCCAGGCTCCCTGGCTGGCCGGTTTGGGCGTCTGGGCCGTGAAGGTGGGACCTCCTGTTCCGGGCCGCAAGTTTCCCTCTCCAGCCGCCCGCCGTTCGTAGCATGTCCCCCAGAACTCGGGGAGCGCAGGCAGGACAGGCTTAGAGAAGACGCGGTCCCCAGCGCTTGGGCCACGGACGTCCCACCCCGCTCCTCTGTCGCTGGAGAACCGCCGGGCCGAGCCACTGGGAGAAGCAGGCCAGAGCCTTCCAGGGCCTCCGGCCCGTGGACCCGAGGAGGATGAGCTGGCTTTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCGGCTGGGTCCCCCGGTGGCCTCACCAGCCTCCAGCAGCAGAAGCAGCGCCTGATCGAGTCCCTCCGGAACTCACACTCCAGTATAGCCGAAATACAGAAAGATGTGGAATACAGATTGCCATTCACCATAAACAACCTGACAATTAACATTAATATATTGCTTCCTCCACAGTTTCCTCAGGAAAAACCAGTGATCAGTGTTTATCCACCAATACGACATCACTTAATGGATAAACAAGGAGTGTATGTTACCTCTCCATTAGTAAACAATTTTACAATGCACTCAGATCTTGGAAAAATTATTCAGAGTCTGTTGGATGAGTTTTGGAAGAATCCTCCAGTTTTAGCTCCTACTTCAACAGCATTTCCTTATCTATACAGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTACCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTCTCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAAATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAAGCCAAAAGACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTTAGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGACTTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAGAAACTTCAGCAGGCGATAGCAATGCACAGCCAATTTCATGCTCCACTATAGACATACACTGTCAAACGGAAGAAATTAAAGCCACATCCTCAATATTAGGCAACAGAGTTTCTAAGAGTGGACAGCTCCAAGAAGGTTGTGAAGTGAGTTATGTTATGTTATAAAAATGTGAAAGCCATTACCACTATATCCTAAGTTTTATTTTAGCAAGGTATTCCCTATTACATATAGTATATTGCAGAAAATGAATAAACATTCCTTGTACTTAATTTGGGAACTGCTCAGCAGAGAATGCCCAAATTTTATATTCTGAAAGAATTAATTACACTTGCTTTATTTTTTACATTAACAGTACTTTTAAATCACAGTTCTCTAATATATTCTATATTTTTAAATATGATGAACACAATTAAATGTTTTCATTTATATATATTGCAACACTCCCTCCAAATCTTTCATACTAGAGAGATCAGCAATGTTGCTTTCTTGCCCTCGTCCTCATTTCAGCGAAATGTAATAATTCTCCCATTAAAAAAAATCAGATATTCAAAATATTGATGTAAATTGTAAAGTTTAAATTAATCCTTTCACATATTCAAAATATTGATCTAAATTGTAAAGTTTAATCCTTTTACATTCTAGAATGTACTAATATATTAAAACCATACAGTGTGAATACCATTTATTTATGTCCAAACATGGCCACTTTTCCCCACTAAGTTTAATTTAGGTCACCTAGTGAAGTCTTTTTTAACTCATAAGATAGGGGAGGGACTCTCCCTTAAATGTGCAGTGTAACAAAACAAAAATTCTTTTCAGAACTTTCAGCAGTCAGTGGTCATGAGATGTTACTAAGGTTAATTAAACCATATTAGCCAGTTACATAATTTCTAAAATGATAGATTACAAAACCTATTCCCTTCATTAAACAGACATGACAACCCAATTCTCTGGTTCTTGAAACTGGATTTTCACTCACAGATGTTTTATCTACTAACTTTATAATGTGATACTTTGAGATCAGGCTGGTGGCTGGCCCACACTGTCGGTAGTGTAGTCTCTAGAACAGTAATAAAAGGTTATTACAAGAAAGCTGATACTTAAATTCATATGTAAGACCAGGAGAATGAATGTTGCTTCTACCTCGTTAGCTATTAAATCAGTGTTAGAGAAAAAGTGAGATACAAGGTTTAGCATTTTTAAATAATGAGGAGAAACAGACTATAGATCTCAGAGAAAAGCAACAAAATTATTCTCACAATTCAAAATATATGCTCCAAGGAAAAGTTAAAGTGATGATTATGCCTGAAAGATAAGCAATTAAAAGCTCCTTAGGAATGCATCTATTAACTAAAAAGGGTGCATCTCACCAATGTGCCTGTTTTTAGAAATATGTATAAGAGGGTCGGAAAGGAGGATAATGTCAGATGCTTTAGAAAACACAAAATATGCATCTAGAAGTGAACTAAAAGAATCATGATGATCACAGATGTGAGGGAAAGGAGTGGAGGCTTTTTGAGAGATGCATGCTATGACAAGGAAGATAGATACTGATCACTTCAGGTAATGACAGAAGTAATTGCTCTGCAGTGAATATAATTTTCATAGTCTAGGGTGAGCTTCAAAATGGTGAATAATTTTCCTTATATTTGATAAATGAAATGACTACGTCCTCTTCAGTATCTAAGAAATCAAGAACTGGGCACTTTTTTCCCTTTTCATAGCTGCATTAAAGTAGTTCTCAATGACATGCACCATTTCCTGTTTTTACAATAAACCACCTTGTTCCCTTGTTTTTGGAAGTGTTGCTTATGTGTCCTTTACTTTGGAACTCCAAAGGGAAACTTCAGGCAGTGAGAAACACGGCTTCATCAGAATCCCGGTCCTTGCCACTATCTTCACTCGGTGCATGCTCACCACCACTTGGAGACCGACAGCTCAAATCCTCCACCCCGGACTCTTGGTCACTGTTGGCTGACAGATCTGGATCTGAACTTTTCAGATTGTCTTGGGTTAGAATCAGAGCAGAATCTTCATCGCCTTGTGAAGGGCTCCGGGATGGAAATGATTTCATATTCCCACTGTAATCCTGGGGAGTGTTGGCTATGCTGTTGTCTGAGGTAGAAAACCCTGAGTGCTTGCTGGGCTCACTTTGCTTACTCTTCACCTTAGTGCAATTTAACTGGACCTTTTGAATTTTTTCCAGCCTCTAA