Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Acsl1
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name acyl-CoA synthetase long-chain family member 1
Also known as Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1
Coordinate chr8:46924074-46989088
Strand +
Gene summary The protein encoded by this gene belongs to a family of acyl coenzyme A synthetase proteins, which convert long chain fatty acids to acyl CoA products via an ATP-dependent pathway. This enzyme is enriched in heart, liver and adipose tissue, where it functions in lipid synthesis and mitochondrial and peroxisomal beta-oxidation. In addition, it is expressed in monocytes and macrophages where it appears to have a functionally distinct role in mediating inflammatory and innate immune responses. A pseudogene of this gene is found on chromosome 5. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2014]

Retrocopy(s) from Acsl1

Retroname Coord Strand Genomic Region ENSG
Acsl1P1 chr5:26560413-26563863 + Intergenic
ENSMUSG00000105786 UCSC

Expression

Transcript Sequences

>NM_001302163.1
GTGTCTGCTAGTTACCTTTAGCCCAGTGGGCAGCGGTGTAGGACTCGGCATGTGACAAATGCCCTGAAAGACCTTGGCAGGCCTGGTAAGCACCCGCTGAGCTGCCctggcccccaccccacccccagcctcactGCCCTTTTCTGATTCTGCTGCGGTGTGTCACCTAGCAGTCAGCTGTCGGATGGCACAGATGAATTCTGCATAGAGAACCACCAACCCAGAACCATGGAAGTCCATGAATTGTTCCGGTATTTTCGAATGCCAGAGCTGATTGACATTCGGCAGTACGTGCGCACCCTTCCAACCAACACCCTCATGGGGTTTGGGGCTTTTGCAGCGCTCACCACCTTCTGGTATGCCACCAGGCCTAAGGCCCTGAAGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCGAAGATCAGCAGTCCTTGAAGATGACAAGCTCTTGGTGTACTACTACGACGATGTCAGAACCATGTACGATGGCTTCCAGAGGGGGATTCAGGTGTCAAatAATGGTCCTTGTTTAGGTTCTCGGAAGCCAAACCAGCCCTATGAGTGGATTTCCTACAAAGAGGTGGCAGAACTGGCTGAGTGCATAGGCTCCGGGCTGATCCAGAAGGGGTTCAAGCCTTGCTCCGAGCAGTTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTGGGTGATCGTCGAGCAAGGATGCTTCTCTTACTCAATGGTGGTCGTCCCGCTCTATGACACCCTTGGAGCTGACGCCATCACCTACATAGTGAACAAAGCTGAACTCTCTGTGATTTTTGCTGACAAGCCAGAAAAAGCCAAACTCTTATTAGAAGGTGTAGAAAACAAGTTAACACCATGCCTTAAAATCATAGTCATCATGGACTCCTACGGCAGTGATCTGGTGGAACGAGGCAAGAAGTGTGGGGTGGAAATCATCAGCCTCAAAGCTCTGGAGGACCTTGGAAGAGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTTGCGATAATTTGTTTCACAAGTGGAACTACAGGCAACCCCAAAGGAGCAATGATCACTCACCAAAACATTATAAACGACTGCTCAGGTTTTATAAAAGCAACAGAGAGTGCATTCATCGCTTCCACAGATGATGTGCTGATATCTTTCTTGCCTCTCGCCCATATGTTTGAGACCGTTGTAGAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTGCTTATGGACGACCTCAAGGTGCTTCAGCCCACCATCTTCCCTGTGGTTCCCAGGCTGCTGAACCGGATGTTcgacagaATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACtttgcctccaaaaggaaagagGCGGAGCTTCGCAGTGGCATCGTCAGAAACAACAGCCTGTGGGATAAACTCATCTTCCACAAGATACAGtcgAGCCTGGGTGGGAAAGTCCGGCTGATGATCACAGGAGCAGCCCCGGTGTCTGCCACAGTGCTGACGTTTCTGAGGACAGCGCTCGGCTGCCAGTTCTATGAAGGCTACGGACAGACCGAGTGCACTGCTGGTTGCTGCCTGAGCTTGCCCGGAGACTGGACGGCAGGCCATGTTGGAGCCCCCATGCCTTGCAATTATGTAAAGCTTGTGGATGTGGAAGAAATGAATTACCTGGCATCCAAGGGCGAGGGTGAGGTGTGTGTGAAAGGGGCAAATGTGTTCAAAGGCTACTTGAAAGACCCAGCAAGAACAGCTGAAGCCCTGGATAAAGATGGCTGGTTACACACGGGGGACATTGGAAAATGGCTGCCAAATGGCACCTTGAAGATTATCGACAGGAAAAAGCACATATTTAAACTAGCCCAAGGAGAGTACATAGCACCAGAAAAGATTGAAAATATCTACCTGCGGAGTGAAGCCGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTACCCGACGTTGAGAGCCTACCGTCCTGGGCACAGAAGAGAGGCTTACAAGGGTCCTTCGAAGAACTGTGCAGGAACAAGGATATCAATAAAGCTATCCTGGACGACTTGTTGAAACTTGGGAAGGAAGCCGGTCTGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCACCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAAGAGGCCAGAGCTACGGAACTATTTCAGGTCGCAGATAGATGAACTGTACGCCACCATCAAGATCTAACGTGAGGAAGGATACTTAGAAGAAATGGCGCATCTCCACAATCCTCCTCGTACCAATGGCCTTCGAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAACACTGCCTTACTTACAGTCACCTGTGTTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTTAAACATTGTAAAGGGGAACCCATAAAAGTGCTAAGTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTTAGGACTTATTCTTTCTGATATGTCTGCTGCTTGCTGCGCGTTTTGCAGCTGTCTGCTGCTCTGAAGAGCACCGTACACTGGAGGAAAGCTGTCCCTTTAAGAACAACTGTCCAGGCTGAAGAAAGTCACAGTGGACCAGAGGTTTTCCTTTTGaacccctcctcccccttgcccctTTCCCTCACCACCTCACATACAGTACACTCACATGACCTTTCTGGTTTGTAAGGGTTCCACACGGTCCCTGTTTGCGCCTGCTGGAACATGAGGTTTTCAGTAAACTAAAGAGCAGACCCTCTTCAGAACATGTGGGTGtccagtctcagaaagaaaaaaaaaatggcggCTCACTCAAACgttctcagactcctctccaaaTCTggtctcctgcctccctccccctcgTCCCAGGGGTTATAAGAAATCCTGCCTTAGACTCTGCAATGAAGATGGTATTTCAAAGAACGCCCTGGAGCGGCCATGCTCAACTGTGACATCTCCACCGCTCTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGGTTTTCCTGGCAAATGATAATGCGGTGATTaccttgctttttttcccctcccagttAAACTCAGGCAAAGCATGTCTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGTAACAAGTAAATATCCTTATTATACAACTACCTGATTTATGTGAAATGCATTTGACAAGCCAAAAATCTGGGATGAAGAAATCTGAGGGGAATAAAATCATACCCTGGGATTCACTTCCCaaggtatatatattttttaagttaatttgggAAATTAACAGCATTTCACTTTACTGCAAGTCTTTGCCACATCCGACCTATCCAAGCTGTTGTTTATACATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAACTGGGTTTGCACTAAAGAATCATCATTGTAATAACACTATTTGGTAGCCTAACTTCATACTCGTATTCTTAATTGCACAGGAAGTCGCTAATTTGTCACAACGGGGTTTTGAATGTTTGCTTTCAGTGTTGGCTATTTCTATGTTTTATAAACCAAAACAGAATTTCCAAAAACAATGAAggaaaccaaaataaatatttctgcaTTTGGAGTGAGTGGA