Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hsp90ab1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name heat shock protein 90 alpha (cytosolic), class B member 1
Also known as 90kDa|Hsp84|Hsp84-1|Hsp90|Hspcb
Coordinate chr17:45878704-45884187
Strand -
Gene summary Enables protein folding chaperone; protein kinase binding activity; and tau protein binding activity. Contributes to protein kinase regulator activity. Involved in several processes, including axonogenesis; positive regulation of protein kinase B signaling; and regulation of cellular protein metabolic process. Acts upstream of or within cellular response to interleukin-4; negative regulation of apoptotic process; and placenta development. Located in growth cone; neuronal cell body; and perinuclear region of cytoplasm. Part of HSP90-CDC37 chaperone complex. Is expressed in several structures, including branchial arch; central nervous system; eye; limb; and placenta. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to human HSP90AB1 (heat shock protein 90 alpha family class B member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hsp90ab1

Retroname Coord Strand Genomic Region ENSG
Hsp90ab1P2 chr1:26505563-26505927 + Intergenic
ENSMUSG00000099458 UCSC
Hsp90ab1P1 chr1:149897983-149898747 - Intergenic
ENSMUSG00000099701 UCSC
Hsp90ab1P7 chr10:55000464-55000920 + Intergenic
ENSMUSG00000112755 UCSC
Hsp90ab1P8 chr11:6786098-6787107 - Intergenic
ENSMUSG00000099102 UCSC
Hsp90ab1P9 chr12:35822850-35825359 + Intergenic
ENSMUSG00000114167 UCSC
Hsp90ab1P10 chr12:62737145-62737338 - Intergenic
ENSMUSG00000114044 UCSC
Hsp90ab1P11 chr13:88657674-88658424 - Intergenic
ENSMUSG00000114465 UCSC
Hsp90ab1P12 chr14:114545904-114548313 - Intergenic
ENSMUSG00000115658 UCSC
Hsp90ab1P4 chr2:50799616-50802024 + Intergenic
ENSMUSG00000083270 UCSC
Hsp90ab1P3 chr2:147484575-147485097 - Intergenic
ENSMUSG00000080844 UCSC
Hsp90ab1P5 chr3:136037965-136038695 + Intergenic
ENSMUSG00000105869 UCSC
Hsp90ab1P6 chr5:10167851-10168609 + Intergenic
ENSMUSG00000105173 UCSC
Hsp90ab1P16 chrX:44492673-44493204 - Intergenic
ENSMUSG00000080764 UCSC
Hsp90ab1P14 chrX:140763075-140765543 + Intergenic
ENSMUSG00000080775 UCSC
Hsp90ab1P15 chrX:157890981-157891349 + Intergenic
ENSMUSG00000083127 UCSC
Hsp90ab1P13 chr15:101737720-101738095 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_008302.3
GAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGTCGGACTTGGTCCGGGCCCACCACCCTGCTCTGTACTACTACTCGGCTTTCCCGTCAAGATGCCTGAGGAAGTGCACCatggagaggaggaggtggagaccTTTGCCTTTCAGGCAGAAATTGCCCAGCTCATGTCCCTCATCATCAACACTTTCTATTCAAACAAGGAGATTTTCCTCCGCGAGTTGATCTCTAATGCTTCAGATGCCCTGGACAAGATTCGATATGAGAGCCTGACGGACCCTTCTAAGTTGGACAGTGGGAAAGAGCTGAAAATTGACATCATCCCCAACCCTCAGGAGCGCACGCTGACTTTGGTGGACACAGGCATTGGCATGACCAAGGCTGACCTCATTAATAACCTGGGAACCATTGCTAAGTCTGGCACGAAGGCGTTCATGGAGGCTCTCCAGGCTGGTGCAGACATCTCCATGATCGGGCAGTTTGGTGTCGGATTCTACTCGGCCTATCTAGTTGCAGAGAAAGTGGTTGTGATCACGAAGCACAATGATGATGAGCAGTATGCCTGGGAGTCGTCTGCGGGTGGCTCCTTCACCGTCCGGGCAGACCATGGTGAGCCCATTGGCCGGGGTACCAAAGTGATCCTTCACCTCAAAGAAGACCAGACAGAGtacttggaggagaggagggtcaAGGAAGTGGTGAAGAAACATTCGCAGTTCATAGGCTATCCCATCACCCTCTATTTGGAGAAGGAACGGGAGAAGGAGATCAGTGATgatgaggcagaggaagagaaaggtgagaaagaggaggaagataaggaggatgaggagaagcCTAAGATTGAAGATGTGGGATCCGATGAGGAAGATGACAGCGgcaaagacaagaaaaagaaaacaaagaagatcaAAGAGAAGTACATTGACCAGGAGGAGCTGAACAAGACAAAGCCTATCTGGACCAGAAACCCGGATGACATCACGCAGGAGGAGTATGGCGAATTCTATAAGAGCCTCACCAATGACTGGGAGGACCACTTGGCAGTCAAGCACTTCTCTGTAGAAGGTCAGTTGGAATTCAGGGCATTGCTCTTCATTCCCCGGCGGGCTCCCTTCGACCTTTttgagaacaagaagaagaagaacaacatcaaATTGTATGTCCGCCGTGTGTTCATCATGGACAGCTGTGACGAGCTGATACCTGAGTACCTCAACTTTATCCGCGGTGTGGTTGACTCCGAGGACCTGCCCCTGAACATCTCCCGGGAGATGCTGCAGCAGAGCAAGATCCTGAAGGTCATCCGCAAGAACATCGTCAAGAAGTGCCTGGAGCTCTTCTCCGAGCTGGCTGAGGACAAGGAGAACTACAAGAAGTTCTATGAGGCCTTCTCCAAAAATTTAAAGcttgGAATTCATGAAGATTCCACTAACCGACGCCGCCTCTCTGAGCTCCTTCGCTATCACACCTCTCAGTCTGGAGATGAGATGACCTCCTTGTCAGAGTATGTGTCTCGCATGAAGGAGACCCAGAAGTCCATCTACTATATCACTGGTGAGAGCAAAGAGCAAGTGGCCAACTCTGCCTTTGTGGAGCGAGTGCGGAAGCGGGGCTTCGAGGTGGTGTATATGACTGAGCCTATTGACGAGTACTGCGTGCAGCAGCTCAAGGAGTTTGATGGGAAGAGCCTGGTCTCAGTGACTAAGGAGGGCCTGGAGCTACCAGAGGacgaggaagagaagaagaaaatggaggagaGCAAGGCAAAGTTTGAGAATCTCTGCAAGCTCATGAAGGAGATCTTGGACAAGAAGGTTGAAAAGGTGACAATCTCCAATAGGCTTGTGTCTTCACCCTGCTGCATTGTGACAAGCACCTATGGCTGGACAGCCAACATGGAACGGATCATGAAGGCCCAGGCACTGCGAGACAACTCTACAATGGGCTACATGATGGCCAAAAAACACCTGGAGATCAACCCTGACCACCCCATCGTGGAGACCCTGcggcagaaggctgaggcagacaaAAACGACAAAGCTGTCAAGGACCTGGTGGTGCTGCTGTTTGAAactgctctgctctcctctggTTTCTCACTTGAGGATCCCCAAACCCACTCCAACCGCATCTACCGCATGATTAAACTAGGCCTGGGCATCGATGAAGATGAGGTCACTGCAGAGGAGCCCAGTGCTGCTGTTCCTGATGAGATCCCCCCTCTGGAAGGCGATGAGGATGCCTCGCGCATGGAAGAGGTGGATTAAAGCCTCCTGGAAGAAGCCCTGCCCTCTGTATAGTATCCCCGTGGCTCCCCCAGCAGCCCTGACCCACCTGGCTCTCTGCTCATGTCTACAAGAATCTTCTATCCTGTCCTGTGCCTTAAGGCAGGAAGATCCCCTCCCACAGAATAGCAGGGTTGGGTGTTAtgtattgtggtttttttgtttgttttattttgttctaaaatTAAAAGTATGCAAAATAAAGAAGATGCAGTTTTA