Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fabp5
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name fatty acid binding protein 5, epidermal
Also known as E-FABP|Fabpe|Klbp|PA-FABP|mal1
Coordinate chr3:10077645-10081670
Strand +
Gene summary The protein encoded by this gene is part of the fatty acid binding protein family (FABP). FABPs are a family of small, highly conserved, cytoplasmic proteins that bind long-chain fatty acids and other hydrophobic ligands and participate in fatty acid uptake, transport, and metabolism. In humans this gene has been associated with psoriasis and type 2 diabetes. In mouse deficiency of this gene in combination with a deficiency in Fabp4 confers protection against atherosclerosis, diet-induced obesity, insulin resistance and experimental autoimmune encephalomyelitis (the mouse model for multiple sclerosis). Alternative splicing results in multiple transcript variants that encode different protein isoforms. The mouse genome contains many pseudogenes similar to this locus. [provided by RefSeq, Jan 2013]

Retrocopy(s) from Fabp5

Retroname Coord Strand Genomic Region ENSG
Fabp5P5 chr18:7581471-7582141 + Intragenic
ENSMUSG00000094334 UCSC
Fabp5P4 chr18:74436381-74437053 - Intragenic
ENSMUSG00000095419 UCSC
Fabp5P1 chr2:119708295-119708933 - Intragenic
Intragenic
ENSMUSG00000081056 UCSC
Fabp5P2 chr8:34774223-34774873 - Intergenic
ENSMUSG00000095202 UCSC
Fabp5P3 chr9:57391196-57391874 + Intergenic
ENSMUSG00000111414 UCSC

Expression

Transcript Sequences

>NM_010634.3
CGGAACAGCGCCCTCGCCACCGCGTCTCTGCTGCTTTTGTGCTCTCCCTCCCACCATGGCCAGTCTTAAGGATCTCGAAGGGAAGTGGCGCCTGATGGAAAGCCACGGCTTTGAGGAGTACATGAAAGAGCTAGGAGTAGGACTGGCTCTTAGGAAGATGGCTGCCATGGCCAAGCCAGACTGTATCATTACGTGTGATGGCAACAACATCACGGTCAAAACCGAGAGCACAGTGAAGACGACTGTGTTCTCTTGTAACCTGGGAGAGAAGTTTGATGAAACGACAGCTGATGGCAGAAAAACTGAGACGGTCTGCACCTTCCAAGACGGTGCCCTGGTCCAGCACCAGCAATGGGACGGGAAGGAGAGCACGATAACAAGAAAACTGAAGGATGGGAAGATGATCGTGGAGTGTGTCATGAACAATGCCACCTGCACTCGGGTCTATGAGAAGGTGCAATGAGGGCTTCCTCGTCATCCTGGACAGGAGTTAGCTGCCAGAGTGAATATGCTCAATTCAGTGAGCGGTCAAATGCAACAAACAGCTTCacttctttggttttatttttcatgacTGTTGAGTTCTCTTTATCACAAACACTTTACATGGACCTTCATGTCAAACTTGGTTTACCCAGGATCATTCCTTTGGTTAGTAAATAAACGTGTTAGTGCTAATTtatgatatgtgtgtgggttcttcAAGGAATTGAAAATTGGTGATACATTATAACACTTAGAAATTGAAAAGCTCTCTGGTATTCTTCAGGATCCCTTATGACTGATATATCCTAGCAACTTGTAGACGTGGCCAGCTTCTTTTGCAGTGAATACATGCCCCGTCATTTAAGCTTGCCTTAAATCGTTTGAACTTTGTCAACTCAATAATTGAGACTATTCCTATCGAATGAtagctacataaattttatagAATAAAGGGAGATCCAAGCTTA