Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name G3bp1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name G3BP stress granule assembly factor 1
Also known as G3bp|RGD1310666
Coordinate chr10:40812858-40846252
Strand +
Gene summary Predicted to enable helicase activity and mRNA binding activity. Predicted to be involved in several processes, including positive regulation of stress granule assembly; positive regulation of type I interferon production; and stress granule assembly. Predicted to act upstream of or within negative regulation of canonical Wnt signaling pathway. Predicted to be located in cytoplasmic stress granule. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol. Orthologous to human G3BP1 (G3BP stress granule assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from G3bp1

Retroname Coord Strand Genomic Region ENSG
G3bp1P1 chr1:169495137-169497008 + Intragenic
 N/A UCSC
G3bp1P2 chr4:136078314-136080873 + Intergenic
 N/A UCSC
G3bp1P3 chr6:79720744-79722871 + Intergenic
 N/A UCSC
G3bp1P4 chr13:4055681-4057850 - Intergenic
 N/A UCSC
G3bp1P5 chr17:86426630-86428471 + Intergenic
 N/A UCSC
G3bp1P6 chrX:120510705-120512680 - Intergenic
 N/A UCSC
G3bp1P7 chrX:85696816-85697966 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_133565.1
CGCGGCATCGCGCGAGGGACGCCGCCACCTCCTCCCACGCAGCAGCCCTGTCCTCCCGCTCAGCCGCACAGGTTGAATCCACCAAAGCGATGGTTATGGAGAAGCCTAGTCCCCTGCTGGTCGGGCGGGAGTTTGTGCGACAGTACTACACCCTGCTGAACCAGGCCCCGGACATGCTGCACAGATTTTATGGCAAGAACTCTTCCTATGCCCACGGGGGCTTGGATTCCAACGGGAAGCCAGCAGATGCAGTCTACGGGCAGAAGGAAATCCACAGGAAAGTGATGTCACAAAACTTCACCAACTGCCACACCAAGATCCGCCACGTGGATGCTCACGCAACTCTGAATGACGGGGTGGTGGTCCAAGTGATGGGGCTGCTGTCCAACAACAACCAGGCTCTGCGGAGGTTCATGCAGACCTTTGTCCTTGCGCCTGAGGGCTCTGTTGCCAACAAATTCTATGTTCACAATGACATCTTCAGATACCAAGATGAGGTCTTCGGTGGCTTTGTCACAGAGCCTCAAGAGGAATCTGAGGAAGAAGTAGAGGAACCTGAAGAAAGACAGCAGTCACCAGAGGTGGTTGCTGATGACTCTGGAACTTTCTATGATCAGACTGTTAGCAATGACTTGGAGGAACATTTAGAGGAGCCTGTTGTGgaaccagaaccagagccggagccagagccggaaccggaaccTGTGTCCGACATTCAAGAGGACAAGCCTGAGCCTGCATTGGAAGAAGCCGCTCCTGAGGATGTGCAGAAGAGCGCCTCCCCGGCCCCGGCAGACGTGGCCCCAGCACAGGAGGACTTGAGGACATTTTCTTGGGCGTCTGTGACTAGTAAGAACCTTCCTCCCAGTGGGGCTGTTCCAGTGACAGGGACACCACCTCATGTGGTCAAAGTGCCAGCATCACAGCCCCGTCCAGAATCTAAGCCTGACTCTCAGATCCCACCACAAAGGCCTCAGAGAGATCAGAGAGCTCGAGAGCAGCGGATCAATATCCCTCCTCAGAGAGGACCCCGGCCAATTCGTGAGGCTGGTGAACCAGGAGATGTGGAACCCCGAAGGATGGTGAGGCACCCTGACAGTCACCAGCTCTTCATTGGGAACCTGCCACATGAGGTTGACAAGTCGGAACTGAAGGATTTTTTCCAAAGTTATGGGAATGTTGTGGAGCTGCGCATCAACAGTGGTGGGAAGTTACCCAACTTCGGTTTCGTTGTGTTTGATGACTCGGAACCAGTTCAGAAGGTCCTTAATAACAGGCCCATCATGTTCCGAGGTGCGGTTCGCCTGAATGTGGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGCGACCGCAGGGATAACCGCCTTCGGGGACCTGGAGGCCCCCGTGGTGGGCCGAGTGGTGGGATGAGAGGCCCTCCCCGTGGAGGCATGGTGCAGAAACCAGGCTTTGGCGTGGGCAGGGGGATTACAACTCCAAGGCAGTGAATTGCTTGGCTCAGATCTCCACACAGCACACAGCCCCGGCTCCTGCAGAATGGTGAATTCCTTCAACCAGCCTTTGGTGTCTTGGAGTAGTCTATTATAAACTGCTTGAGTTTGTACAATTTTAATTTCGCTTGTGTTCATGGTGTGTGCTCCCCAAACCCCTTTCCTCCCTTGACCTTTTAGTCCTTCATTCCCAGTTTTCCGGAATGATACTTTAGGAGGAATAGATTTGTAAAGACGAAGAGGAAAGACTGACCTTCCTGCTCACGCTGCATACACAGACTGGAGTCTCACGGCCATTCCCCAGAAGTGTCTCGGTTTCACTGACCACGGATGTTTCATTTGTTGGGAGACACAGGATTTGATAAACATTTTGGAAGCGGGAAAAATCAAGTCACAACTCCTTTCTGGTGTGGAAAAATTGCCTTTTGGCAACTGCCACTGGGTCCCTGCAGGTGTGGCTAACTGAATAAAAGGTGTTCTTTTGACATGTGATTACCAAACAATTCTAAACCTCCATTTTTACCATTGGATTTTTAAATTGTGATGTAGCCTGTCAATGTCTAGAACACAGCTAAAGACTTTTGTTGAACTGTTAGATTTTTTTGAGGTAGAGTTTTTCATGTTTTATTTGTATTTGTaaaaaaaaaaaaagaaaaaaaaagaaaaaagaaaaaaggacaaaaaaTTCCCACGAGAAAACAAACCCCAAATCTGATGACAAAACCAAGCAACACTGTGCCTTCTATTTATCGTTGACTCCGGCCCTGGCAACTGTTTAAAGGAAAGTAATAAAGATTCCAGAGTTGTTTTCAGATTCAGAGTATGTGGGGGAACTGCACAAGTTTTTTGATCACGTGTATGTGTCGTGTTAACATTGTTCTGCCTTATCCTAAATCACGCCTCAGACTGGGATGCTTTTGAGGAAAGGTGCTTCTGTGAGGCCTCTGACCTCAGTGGCTCTGTGCGCCACACTCTACTCTGCTGTCTGTCTGGGTTCCTGGTGGGCCATAAGAAGGATTTGGTTGAATATTGGACTTGGCTAATGTGCTCCAGGGTCTGCATTTTTTTTCTTTAAATCATAGCCATATGGTAAATTTTCTATTTTGTTACGGTTCTCTTTTACTGATGGACATGCAGTGGGTGTTTCTTGGAAAAAGGCCAATTTTTATTAAAATATTTCTGGAAGAAAACTTCATCTGGCAATGTAGACTGCTAAAACTCACTTTCCAGTGTTGTGTGTTGAGTGCTGTGTGTGACATTGGGTGAAGGTTTTGTCCGCACAAGCCTCCATGGACAAGTCATTAGTCTGAAGGCAACCAGAGTGTCTAACTTTTCCTAATGTTTGTGTGtatgtctatgtatatgtgtatgtctatgtatgtgtgtatgtatatgtatGTGGGAGTCTTCATACATGCGTGCACCACAGTATGCTTGTGGAAGTCAGGGCAACTTGGGATCTAGGCCTTATACTCCACTGTTTGAAATtggcccatgagccacaagcttctatgggctcctgtttgtgcctctcatcttgctgtaagggcacaaggatttcagacatgtgctgccatgcctgtcttccctgtggcttctgggaattagtcaggtcttcatacttacaCATAGTGCTCAGCCAGCTCGTCTGACTTTAGAGCTGTCACATATGTATGCTGGTTTTGTTAGGGTAGTTGGGATGAAAATGGTGTGAGGTTGTCAGGTTTGGTCTCAATACCTCACAGATCTAAATGTTGACAGCATGTTGTGAACTGAGGTAACCAAATCCCACGACTGGGGGTTCAGTTTAAGCACTTCATTTGAGGTGGTGACGATGCAGATGTGTGCAGCATGTACTTTGTAGTAAAGTGTATGGTTACAAGGACAACTGagccaggcttggtgactcatgatgataaccccagcactcaggaggcaaaagcatggtctgtgaagcaagttccaccaaggttgcatagtgtgactttcaagaaaCAAGGCAAAAGGGCAGCAAAGAAAAGTCCCAAGTGGCACACAATGGCACAGGCTTGCCTGTGTAGTCTCAGATCTCCGGTTCAAGGCTAGTCTGGCCCATATAATAGTCTCTTAAAAGTTTCAGTAACTTGGGTAAATCTAAAAATGATTTTCACAATTGAGTACTAAGACATGCATTTAGAAGTTTTTTCCTAGTCACCTGATTAGGTGATTGACATTTGCTGTACAGAGTAAGGTGTCATGGCAGCATCCCTCATTTCTCTGGAGACCAAGGGTATCAGAGTGATCTGGATTGATCTGAGAAAGAGCAACCTGTGGGTGGGTTGGGATATGAGAAGCCCATTCTCTTCTACCTCAGATAAGTGTGTAGCAGTACAACCGCGCGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtAGGGATGTAGCAGTACCCCTATTGCTTGTGACTGGGGTTGGGGAACTGCTTCAGCCCTACCCTATTTCCCAGCAGTGGCACTGGGGATCAGAGTGTGCTTTGGAAGGGCATGGGTCTCAGCTTGGCAGCCCGTTTTGCACTGGAGAATCTGGATGCCAATGACACCACGTGAAGCCTAAACCTTGGAGCTTAAGAGGTGCTCATGGTTACAGAAAGCACAGGCTATTTCAGAAGTGGCTGCTGATGTCAGCCTTCTCATGTCAAGATTTGATCTGCAGGGAAGACTCAGGATGTCGTTCTTTGTTATTGAGCTTAACTAGGATCCGTGATGGGTATTTTAGCCAAGTGAGACTttatgtatgtgtacatgtctatgtggatgttggccacatgtgcaggtgcctcagaacacctatggccccttggagctggagttacaggtgagtgagccctcccacataggagctgggaatcgaacttaaagtcctggaagagcagcagggtactcttaggcatgagtctctgttcagaccTATTGGAAGTAAGTAACCAGACCTTGACCAGACCTTTCATTTGCTTTCCTTGTGAGGTGGCACTCCTGTGCTCTGCAGTCTCAGCTGCTGCTTTGGAACAGGGACAGTGACAGTTGGAGAGTTGCAATCAgggcctgtggcacacgcttaatcctggtgctcaggagactgaggtgaggattgtgaattcaaaaccagccttgattacaaagcaaagcccacttttgtttacagcaaaacaaGTGAGCCCACTTAGCTTTCATGTGTGCCTTGGATTATGGCACAGTAATAAAGGGAAGAGATGGTGGGAAGCAGTTGAGCGAACAGGGCTTTCAGGAGCAGGCGGGGCTTCGGGCAGTACCTACAGTATTGAGCCAGGAGCCCGGTTCCTGTGAGTGCCTGTGAGCTGGATGTCTAGGGTGGAATTTCCACCTCTCAGACCACTTGGGGTGCCATTCAGGACACAGTAGCGCCCTGCAAAGTTAGCTCACCAGTTGCCCTCTACATAGCTGCTCCCTGCCCACCTTTAGGGATGGATTTACTGTGTCAACAAGCTGGGTCTTGTGAGGTGTGAGGAAGGGAACAGGTGGTTCtgtgtgtgtctgtgtgtggaagccttgggcgttccacaggagccgtccaccatgtttttgcttgtttttgtttttttgtgacgtttcattgtgtattcatttctagctgttctggaacttgctacatagcttagcctcctattaactcagaaatttgccttcctctctgcctgccaaaagttggtatttaaggtgtgcaccaacacaccaggctctaccttgtctttttaaaataaggcttctcacctgttaccctgattaagctgtgattaagtcagtgaactccagggacccacccgtctacctacatggtgacaccatgtgtgttctacagactgaattcaggtcctcactttacagaacaaacaAtttctccagagacagtgtctctgtgtatcctggaatgcacgctgtagacaaggctgccctcaaactcagaggtccacctgtctgcctagtgggattaaaggcctgcatcaacaccgcttggctGCTAATGTGATGCTTTAATACCTAAAACGTGGCTGCCACTTTCTCTGAGGTCCTTTAGCATTCTGTGTTCTGAACCTCGGTGTTTTTGCCCCAGGGGCAGCGTTTTGGGTGGAAATACACCCAGCTGTCAGGACGTGTATGTGTCATGTGCGGATTAAGAACCCACTGTTTCTTTCCATTTGACTCGCACTTGTGTGATGAGTCCCCATGACACTCCTGGGTATGCTGAGACCTTAGCGTCATGTGACTTCTCCCTGCACGTGTGCCTGTGTGCTCCAGCCCCACCTCTGTCTCACGCTGGTTTTTGTCTAGACCTGCACTGTTGAGCACTGTAAGTGAACAGATTGATCCCCCTTCATTTTGTTTGTCCCTTTATGGTTCTGTCCCATCCATTGTCATAAGCAGGGTCTTCCTAGAGGACTCTGCCCCTCTTATGGTTCAGCCTGGAGTTGGAATTACCACTGGGTTAGGTTGTGGCTTCTTAAGGAATTGAGACCTGACACTTTGAAGTCCCCATGATGGTTGAGTCAGTGACTGGGGGTAGCCTTCCATCAATTTCAGATCGGAAATTTCAGTATAGGAAATTGTtgggaggctgggggttgggaggtggggcatgtgtgaggaggaagTCCCCGGTCTCAGACTTACTTCCTGCTTGTTCCTAGTCCCTGCAGAACAACTGATTTGTTGTAAGCTCAGAACTCAAGCTCCACCCTGCTAGAGGAGAGTGGTCAGTTTCCTTCCTTCCTCCCTGCACCCAAGGTTCAGTTAAATCCCATCATGCTACCTCAGCAGACTCCCCAGGTCACTCCTCCCACCTCCAGGATCTTGCTGGTCTTTGCATCATCTTTAGATGAGTCTTTCTGAAACAACCTTGGCCTTGTATCCCCCACACgtgtgttttctctcaccagtcccatagactgtaagcccctgtggcagggtctatgagtgagtcgcctgtgttaaccttcagtggtacctaccaataaatattcttggctgaataaatgaaA