Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Mdh1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name malate dehydrogenase 1, NAD (soluble)
Also known as B230377B03Rik|KAR|MDH-s|MDHA|Mor-2|Mor2
Coordinate chr11:21506692-21521934
Strand -
Gene summary This gene encodes an enzyme that catalyzes the NAD/NADH-dependent, reversible oxidation of malate to oxaloacetate in many metabolic pathways, including the citric acid cycle. Two main isozymes are known to exist in eukaryotic cells: one is found in the mitochondrial matrix and the other in the cytoplasm. This gene encodes the cytosolic isozyme, which plays a key role in the malate-aspartate shuttle that allows malate to pass through the mitochondrial membrane to be transformed into oxaloacetate for further cellular processes. A recent study showed that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is localized in the peroxisomes. A pseudogene has been identified on chromosomes 12. [provided by RefSeq, Feb 2016]

Retrocopy(s) from Mdh1

Retroname Coord Strand Genomic Region ENSG
Mdh1P1 chr12:100045976-100046645 - Intergenic
ENSMUSG00000112999 UCSC

Expression

Transcript Sequences

>NM_001316675.1
GTTTAGCACTGTCAGGAATGCACGAAGGTGGGCGCCAGAGGTCGCCGGAAGAACTACACTTCCCAGAAAGGGCCGTGTCTCCAGCCGAACCTTTGCGGGCCAGCCCCGCGTTCTCTCCCAGAGTCTGTTCCGCTGTAGAGGTGACCTGACTGCTGGAGACTGCCTTTTGCAGGTGCAGAGATCGGCCTTGCAGTTTGCAATAATGTCTGAACCAATCAGAGTCCTTGTGACTGGAGCAGCTGGTCAAATTGCATATTCACTGTTGTACAGTATTGGAAATGGATCTGTCTTTGGGAAAGACCAGCCCATCATTCTTGTGCTGTTGGACATCACCCCCATGATGGGTGTTCTGGACGGTGTCCTGATGGAACTGCAAGACTGTGCCCTTCCCCTTCTGCAGGATGTCATTGCAACGGACAAAGAAGAGATTGCCTTCAAAGACCTGGATGTGGCTGTCCTAGTGGGCTCCATGCCAAGAAGGGAAGGCATGGAGAGGAAGGACCTACTGAAAGCCAATGTGAAAATCTTCAAATCCCAGGGCACAGCCTTGGAGAAATACGCCAAGAAATCAGTTAAGGTCATTGTTGTGGGAAACCCAGCCAATACGAACTGCCTGACAGCCTCCAAGTCAGCGCCATCGATCCCCAAGGAGAATTTCAGTTGCCTGACTCGCTTGGACCACAACCGAGCAAAATCTCAAATTGCTCTTAAACTCGGTGTAACCgctgatgatgtaaagaatgtcATTATCTGGGGAAATCATTCATCGACCCAGTATCCAGATGTCAATCATGCCAAGGTGAAACTGCAAGGAAAGGAAGTCGGTGTGTATGAAGCCCTGAAAGACGACAGCTGGCTGAAGGGAGAGTTCATCACGACTGTGCAACAGCGTGGTGCTGCTGTCATCAAGGCTCGGAAGCTGTCCAGTGCAATGTCTGCTGCGAAAGCCATCGCAGACCACATCAGAGACATCTGGTTTGGAACCCCAGAGGGAGAGTTCGTGTCGATGGGTGTTATCTCTGATGGCAACTCCTATGGTGTCCCTGATGACCTGCTCTACTCATTCCCTGTCGTGATCAAGAATAAGACCTGGAAGTTTGTTGAAGGCCTCCCCATTAATGACTTCTCCCGTGAAAAGATGGACCTGACAGCAAAGGAGCTGACCGAGGAAAAGGAGACCGCTTTTGAGTTTCTCTCCTCTGCGTGACTAGACACTCGTTTTGACATCAGCAGACAGCCGAAGGCTGAGGAATCAAAATGTCGTCTTTGAGCCTAGTACCAAACAGTAATAATGCTACATTCAAATTGTGaacagcaaaatattttaaatagtgtGTGCTTTATGATTTGTGAAAGTCTATCATGTTGTTAGTGCTGCAATctaaataaaagtatattcaaGTGAAAATCTCTCAGACTCTGTTTCTACTTTATATTTAGTATCTTCAGGAAAACAAGTTTGCCCAATAgattataattttacttttttaattgactaaaagaaataaagatggaaaatATTATGAAGTAAAGCATTAGTCTCTAACATAAACAAGGAAGCCCAATCAATTTCAGAGGGATCCCATTACTTAAGTCCTTAAAGGTTGGTTCATGTTTTGCTcataatttgattttaaaattagcTGTAAGAAGGTTGCAGATAATCTATCTTCTTTATATTCTATAGCAGAATAATGAAGTCATTAATATTTGATAGCCAATAATACCACACTATTAATATTTGTAAGCTAAGATTATTAGAAACATAAAACTGTTTTTGAGTCAGTCTGTTTTCCATGAGAAGACATGCATcatctttgtgtgttttgtgcatTACTCAGTGCAATAAATAACCATAATCTCAAAGCTGGCTGTAATTTGCTTTGTGGATATTCAAATACTTGTTGGTTAGATTTGCTGTTTACCTGTATTAGTAAATATTATCTATATTAAAGTGC