Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pcbp2
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name poly(rC) binding protein 2
Also known as Hnrpx|alphaCP-2
Coordinate chr15:102378885-102408503
Strand +
Gene summary Enables C-rich single-stranded DNA binding activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in central nervous system and sensory organ. Orthologous to human PCBP2 (poly(rC) binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pcbp2

Retroname Coord Strand Genomic Region ENSG
Pcbp2P1 chr6:86501821-86502261 - Intergenic
 N/A UCSC
Pcbp2P2 chr6:87490175-87490468 + Intragenic
Intragenic
 N/A UCSC
Pcbp2P3 chr12:61310613-61311433 + Intergenic
 ENSMUSG00000114039 UCSC

Expression

Transcript Sequences

>NM_001103165.1
TCCACCCGCCCCGGggtctctctcccccttcctcctcctcaccccccccTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCTTTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTTCACCAGTGACCAAAGACTTGACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCAGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGagtGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGgACATAAGCAGCTCTATGACCAATAGTACAGCTGCCAGTAGACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAACTCAACTGAGCGGGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCTAGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGgcAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATtTGATTGGCTGCATAATCGGGCGTCAAGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGCCTGGCTCAGTATCTAATCAATGTCAGGCTTTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGACCCATCCATAATCCTGCTGTTCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGACTCCAGGTTTTAAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCatgattttttaattaaagtgTTTTAATTCCTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTTCTCCcccttttgttttttggtttttgtttttgtttggctcATGAATTTTTGTTTGTCATGGAAATGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCaggaatttttcaaaaaaaaaaattaaaagatggaCTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTACGTGGGTGTTGTTCCTGTCTGATGTTATTTTTATACCTTTTAACTTCCAGAGAGCCCTGATTCAGTTTCAATAGAATTAATggactttcttcccttttttacCACTCCAATTTTTTTAATTTGCCCTCAATCACCTCCCCCTCCATGATACTGGGTAGCCTCTGAAAACTTGTTTACGGAGATTGACAATTACACTTACCCTAGGATTGTAGAGCAGCTGGTGCATTTATGGAGCTGGGCAGGAACTCGTGGATAGTAAGGATAGTAAACTTGGGAATGGCTGCCCCTTGTTCTACCTTGCATACTTTAAAGTTCTAGTAATTGTTCATTTAGTTTTCTCCATAGGTGTTTTGAGACCTCCTTGTTCTGAAATCATTTAGAAAAGTTTACCTGCTATCATTTATGTTAACTTAGAAAATAACTTGTCCAAATTCCTCAGATAAAATCTTAAATCCAAGTTGAAACCATGTATTATACCACTCTACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTATATTTCAAGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAAGATAACAGTGGGGACTAACAGCACCCCAGTTCTTCAGCCTGAGCCATCACATGCTGTTAGTCGTCTGGCCCAAAGCCAGGGTTTGGGCAGAGAAACAGGAACAAAGAAATGAGTTACATTGCCACCTGAGAAACCTCAGAGGGATGACCCAGCCTtagtttctttccctcctcccaagTGCAAAATGTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTACCTGCCCCTCCAGTGTTCAGGGATAGACAGTATAGAGACAAGCCTGGCTTTTCTATTGCCTACTTGCTTGTTCAACATAAGGAATGGGGTGAAGCAAGAAGGGGCCAGCTTCCTTTCTTTATAGCTCTAGGGTAGTACTCGGAGTCATTCATTTCCACAGCTGCCAGTGTCCCCAGAACTTATTCGGTAATTGGTCAGGGGCGTCGTTCACTCTCAAGCCTGGCTTAAGGCTAAGAAAGCCCCATCTATCTGTTGATTATGTGGcgcatatatattatttatataaatatttctctATG
>NM_001103166.1
TCCACCCGCCCCGGggtctctctcccccttcctcctcctcaccccccccTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCTTTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTTCACCAGTGACCAAAGACTTGACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCAGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGagtGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGgACATAAGCAGCTCTATGACCAATAGTACAGCTGCCAGTAGACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAACTCAACTGAGCGGGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGgcAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATtTGATTGGCTGCATAATCGGGCGTCAAGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGCCTGGCTCAGTATCTAATCAATGTCAGGCTTTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGACCCATCCATAATCCTGCTGTTCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGACTCCAGGTTTTAAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCatgattttttaattaaagtgTTTTAATTCCTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTTCTCCcccttttgttttttggtttttgtttttgtttggctcATGAATTTTTGTTTGTCATGGAAATGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCaggaatttttcaaaaaaaaaaattaaaagatggaCTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTACGTGGGTGTTGTTCCTGTCTGATGTTATTTTTATACCTTTTAACTTCCAGAGAGCCCTGATTCAGTTTCAATAGAATTAATggactttcttcccttttttacCACTCCAATTTTTTTAATTTGCCCTCAATCACCTCCCCCTCCATGATACTGGGTAGCCTCTGAAAACTTGTTTACGGAGATTGACAATTACACTTACCCTAGGATTGTAGAGCAGCTGGTGCATTTATGGAGCTGGGCAGGAACTCGTGGATAGTAAGGATAGTAAACTTGGGAATGGCTGCCCCTTGTTCTACCTTGCATACTTTAAAGTTCTAGTAATTGTTCATTTAGTTTTCTCCATAGGTGTTTTGAGACCTCCTTGTTCTGAAATCATTTAGAAAAGTTTACCTGCTATCATTTATGTTAACTTAGAAAATAACTTGTCCAAATTCCTCAGATAAAATCTTAAATCCAAGTTGAAACCATGTATTATACCACTCTACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTATATTTCAAGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAAGATAACAGTGGGGACTAACAGCACCCCAGTTCTTCAGCCTGAGCCATCACATGCTGTTAGTCGTCTGGCCCAAAGCCAGGGTTTGGGCAGAGAAACAGGAACAAAGAAATGAGTTACATTGCCACCTGAGAAACCTCAGAGGGATGACCCAGCCTtagtttctttccctcctcccaagTGCAAAATGTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTACCTGCCCCTCCAGTGTTCAGGGATAGACAGTATAGAGACAAGCCTGGCTTTTCTATTGCCTACTTGCTTGTTCAACATAAGGAATGGGGTGAAGCAAGAAGGGGCCAGCTTCCTTTCTTTATAGCTCTAGGGTAGTACTCGGAGTCATTCATTTCCACAGCTGCCAGTGTCCCCAGAACTTATTCGGTAATTGGTCAGGGGCGTCGTTCACTCTCAAGCCTGGCTTAAGGCTAAGAAAGCCCCATCTATCTGTTGATTATGTGGcgcatatatattatttatataaatatttctctATG