Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name EMP2
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name epithelial membrane protein 2
Also known as XMP
Coordinate chr16:10528422-10580598
Strand -
Gene summary This gene encodes a tetraspan protein of the PMP22/EMP family. The encoded protein regulates cell membrane composition. It has been associated with various functions including endocytosis, cell signaling, cell proliferation, cell migration, cell adhesion, cell death, cholesterol homeostasis, urinary albumin excretion, and embryo implantation. It is known to negatively regulate caveolin-1, a scaffolding protein which is the main component of the caveolae plasma membrane invaginations found in most cell types. Through activation of PTK2 it positively regulates vascular endothelial growth factor A. It also modulates the function of specific integrin isomers in the plasma membrane. Up-regulation of this gene has been linked to cancer progression in multiple different tissues. Mutations in this gene have been associated with nephrotic syndrome type 10 (NPHS10). [provided by RefSeq, Mar 2015]

Retrocopy(s) from EMP2

Retroname Coord Strand Genomic Region ENSG
EMP2P1 chr2:26141086-26141367 - Intergenic
ENSG00000231655 UCSC

Expression

Transcript Sequences

>NM_001424.6
ACCCccagccagtccgtcgatccagctgccagcgcagccgccagcGCCGGCACATCCCGCTCTGGGCTTTAAACGTGACCCCTCGCCTCGACTCGCCCTGCCCTGTGAAAATGTTGGTGCTTCTTGCTTTCATCATCGCCTTCCACATCACCTCTGCAGCCTTGCTGTTCATTGCCACCGTCGACAATGCCTGGTGGGTAGGAGATGAGTTTTTTGCAGATGTCTGGAGAATATGTACCAACAACACGAATTGCACAGTCATCAATGACAGCTTTCAAGAGTACTCCACGCTGCAGGCGGTCCAGGCCACCATGATCCTCTCCACCATTCTCTGCTGCATCGCCTTCTTCATCTTCGTGCTCCAGCTCTTCCGCCTGAAGCAGGGAGAGAGGTTTGTCCTAACCTCCATCATCCAGCTAATGTCATGTCTGTGTGTCATGATTGCGGCCTCCATTTATACAGACAGGCGTGAAGACATTCACGACAAAAACGCGAAATTCTATCCCGTGACCAGAGAAGGCAGCTACGGCTACTCCTACATCCTGGCGTGGGTGGCCTTCGCCTGCACCTTCATCAGCGGCATGATGTACCTGATACTGAGGAAGCGCAAATAGAGTTCCGGAGCTGGGTTGCTTCTGCTGCAGTACAGAATCCACATTCAGATAACCATTTTGTATATAATCATTATTTTTTGAGGTTTTTCTAGCAAACGTATTGTTTCCTTTAAAAGCCaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaagaaaaaaaaaaTCCAAAAGAGAGAAGAGTTTTTGCATTCTTGAGATCAGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAGACACAAGCAAAAATCCAGCAATGCTCAAATCCAAAAGCACTCGGCAGGACATTTCTTAACCATGGGGCTGTGATGGGAGGAGAGGAGAGGCTGGGAAAGCCGGGTCTCTGGGGACGTGCTTCCTATGGGTTTCAGCTGGCCCAAGCCCCTCCCGAATCTCTCTGCTAGTGGTGGGTGGAAGAGGGTGAGGTGGGGTATAGGAGAAGAATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGGGTCAGAAAAAGTCTCACCTCAATTTGCCGACAGTGTCACCTGCTTGCCTTAGGAATGGTCATCCTTAACCTGCGTGCCAGATTTAGACTCGTCTTTAGGCAAAACCTACAGCGCCCCCCCcctcaccccagacctacagaatcagagtcttcaagggatggggccagggaatctgcatttctaacgcgctccctgggcaacgcttcagatgcgttgaagttggggaccacGGTGCCTGGGCCAGGTCAGCAGAGCTGCCTCGTAAATGCTGGGGTATCGTCATGTGGAGATGGGGAGGTGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTCTACATCTAGGGCCCCAAAACTCCATTCCTGAGCCATGTGAACTCATAGACACCTTCAGGGTGTGGGGTACAGCCTCCTTCCCATCTTATCCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCTCTCACCCCTATTTCTAGAGCCTCAGAGGACCCATCCACcattcattcattcattcattcattcattcattcattcattcatCAACATAAATCATAACTTGCATGCatgtgccaggcacaggggataccctctagagacaatctcctcctagggctcatggcctagtggaggagacagaTTAAAACTTAATTAGAAAAACTggctgggtacagtggctcatgcttgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaaaatggtaaaacctgtctctactaaaaatacaaaaatgagctgggcgtggtggtgcatgcctgtaatcccagctatcaggtggctgaggcaggagaatcacttgaaatgggaggtggaggttgcagtgagccgagaccgtgccactgcactccagcctgggtgacagagtgagactccatctcaaaaaaagaaaaaaaagaaaagaaaCTAATTACACACTGTGATGGAGGCTGCAAAGAACACCACTAAGAATTCAAAATCAgctgggtgcggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctaccgaaaatacaacaaaattagcccggtgtggtggcaggtgcctgtaatcccagctacttaggaggctgaggcaggagaatcgcttgaaactgggaggcggaggtcgcagtgagccgagattcaccactgcactccagcccaggcgacagtctgagactccgtctcaaaaataaaaCGATTCAAAATCGAGGCCTGTGGCATGGTAGGGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTATTTAGATCAGTCTAAATATAGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGTCCCGACAGTAAATGCGGTGAGAGGGTCCCATAGAGCTGGAGTTTTCAAGCTTTAGGGGTTCCCGTGCTGCTTGGGACAGGCTGATTCAGAGGGTCTGGGTGAATGATTTCCAGGTGATTTTAAGACTGTGCTGAGAAATAGGGCTTTTGGGGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGAACCATCCCAGGAGATAAGCTCTTTGCACCTCATTGTCTTTTTCTGCTTATGTTGGAGCAGGATGCTGGGGGCTGTCCTGGGATGGGGTGTGGGACCTCGTGCTATTTAAATACTTTTGCACTTGACCTTCTGCTGAGTGGAGTGGTGGTTTGCCATCAGCTCAGTTCCAGTGGAGCTGAAGAGACATCTGGTTTGAGTAGTTTTAGGGCCACCATGGATATCTCTTCAATGCAGGATTGGCTCTTTCCATCTGCTCTTTCattcatttgtttttgacagatagtattaaatgtttaccatgttccaggcactgtgtgaggctctgaaaatacaggggtgagcaaatccagatatcctccctgccatcatgaagtttggagtctatgagataggacCCCCTCCCTATGGAGAAGCCACCAATGCAGTACAGGGTGACCTGGGGCCAGAGACAGGACAAATGTCACCTCCTGCCTCCATGAGATACTCTCACTAGTCATATTGTGGGCAAGAATGTGGCTTACACCCCTAGGGTTAACAGGATGCTACCCAAGCTCATGGAGGAAGTTGAATCTTAAGTTCCCTTGAAACTTTCTACCTTGGTGGCTTTTCTATAATTTTCTtttttctttttcttttttttttttttttttgagactgagttttgctcttgttgcccaggctggagtgcagtggcaccatcttggctcaccgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtcccaccatgcccagctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtttcgaactcccaacctcaggtgatccgcccacctcagccttccaaagtgctgggattacaggcatgagccactgcgtctggccTTCTATAATTTTCTGGTAGTCACGATGGAAACAAACAAAACACCTTAGAACCAGAGATCGACCCCCTCAAGCAATACATCAATTCCCTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAACATTCAGTGCCCACATCCACCTGTGCCATTAAGCTTTTTTGAGACATGAGAGATGCCTCTTCCCTGCTGTATGACATGCATTTGGGAAGTTGGAAAGAAATGACAAAATCAGGGAGAAAACATCCAAGCTTCTTACCTGTAGATAGAATCAGCCCTCACTTGGTGCTTATTACCAGTTATTCAAGAACAATAACAACAACAAAATTAGTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGAAGGAACTGTAGTTTGCGCATTTTATGACATTTTTATAAAGTACTGTAATTCTTTCATTGAGGGGCTATGTGATGGAGACAGACTAACTCATTTTGTTATTTGCATTAAAATTATTTTGGGTCTCTGTTCAAATGAGTTTGGAGAATGCTTGACTTGTTGGTCTGTGTGAATGTGTATATATATATACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGTGCTTTTGTGGACACCCCTCATGAACAGGCTGGCGCTCTAGGACGCTCTGTGTTCACTGATGATGAAGAAACCTAGAACTCCAAGCCTGTTTGTAAACACACTAAACACAGTGGCCTAGATAGAAACTGTATCGTAGTTTAAAATCTGCCTCGCGGGATGTTACTAAACTCGCTAATAGTTTAAAGGTTACTTACAATAGAGCAAGTTGGACAATTTTGTGGTGTTGGGGAAATGTTAGGGCAAGGCCTAGAGGTTCATTTTGAATCTTGGTTTGTGACTTTAGGGTAGTTAGAAACTTTCTACTTAATGTACCTTTAAAATAGTCCATTTTCTATGTTTTGTATAATCTGAAACTGTACATGGAAAATAAAGTTTAAAACCAGATTGCCCAGAGCAAGACTCTAATGTTCCCAACGGTGATGACATCTAGGGCAGAATGCTGCCATTTTGAGGGGCAGGGGGTCAGCTGATTTCTCATCAAGATAATAATGTATGGTTTTTACACTAAGCAACTGATAAATGGACAATTTATCACTGGA