Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name C4orf46
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name chromosome 4 open reading frame 46
Also known as RCDG1
Coordinate chr4:158666675-158671887
Strand -
Gene summary This gene encodes a small, conserved protein of unknown function that is expressed in a variety of tissues. There are pseudogenes for this gene on chromosomes 6, 8, 16, and X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2013]

Retrocopy(s) from C4orf46

Retroname Coord Strand Genomic Region ENSG
C4orf46P2 chr16:231083-232010 + Intergenic
 ENSG00000206168 UCSC
C4orf46P1 chr8:78723106-78724038 - Intragenic
 ENSG00000254352 UCSC
C4orf46P3 chrX:77962597-77965212 + Intragenic
 ENSG00000248503 UCSC

Expression

Transcript Sequences

>NM_001008393.4
CTTTCGGCTTTGGGCGCGAGTGGTTAAAAGACAGTTGGTGTCGGTTCGGCTTCTCGGGTCGGATTCCGCGGTCCCAACCCTTCCCCATGGCCGACCCTGAGGAGTTGCAGGTTTCTTCGCCGCCCCCGCCGCCTCCCTCTTCTCCCTCCTCTTCAGACGCCTCTGCAGCATCTTCCCCGGGCGGCCCAGTGAGTTTGGGCTGGCCAGTTCCGAGCAGGAGCAGCGGCCCAACGGTGGACCAGCTGGAGGAAGTGGAGCTGCAGATCGGAGACGCAGCCTTTTCATTAACCAAACTTCTTGAAGCCACATCTGCAGTATCAGCTCAAGTGGAAGAACTTGCCTTCAAATGTACAGAAAATGCACGTTTCCTTAAAACGTGGCGGGACCTCTTGAAAGAAGGCTATGATTCTTTGAAACCTGATGACTGATTTGGCATACTTCGTTGTTTAATAATGACTGCAATAATTCATACTTCTTATGTCATATTTTGTACATGTACCACACATATAGGATGACCTCTGTCCAGCAGTTCTGTATATACTCAGAATGAAATTTTTCTTGGTTTTCTTGGTTTTTGTGAAAGCAGAATACCGATGCTATTTTTGTTGCGGACCAGTACTTGTTTGTCCTTAAATACTTTATGCCTCTGAACTTTCATAGAATCCTTTATGAAAGTTAACTTCATCAATAGACGGTTAATATTAATAGAGCCACAGTGCTACCAGTAGCAAACTAGGTAGACCATTATTTGTTTTGCAACAAGATGCTAAGCATGGCAGACTTTGAAGTTGCGTTTCATCTTAAGGACCAAGGGAGGTAACTTTAAGGTTGCCAGTGGTGGATCCAGctccgttaggctaagttgtctacagctaatgattgtgtctttattctatatccccagcacctaaaacagggtcacacaacattcactaaatgtttgttgaataaaagagtTAACAAACATAATTGAAAGCTTTTTTTCTTCCTATATTTAGCATGAAGACTGTCATTGTTTCTCTAGGAAATGTATGAATCTGAACTTTTTTGACTTGAAGAAAAACATTCTTTTTTTACAGAGATTTGGACTTTGATGATAGGTTTTAAAAATATATGATAAATATTTTTTGTACTTGTTTGATTTTTTTTTTAAAGACTTTACTTCAGAAAGGGAAAGACTGTTTAGAAAGAATGCATATTTTTTCCCTATTTATTTCTGTGGTTACTGCTTTTGCAGTTTAACAGTGTTTGTATTTGATATTTGTATATGTTTGATTGCTATCTTTAAAGTGCCTTATCAGATTTATGGCTCTGTGCTATTACTTTTTGAGCTTTGCAAGTTGTGTACATAATAATTCTAAAGAAGTTACTTTGTTTGCAATGCATCAAATTTAAATGATGTGATTTTTTTTGTATTATTTGATCTTAGTGACAGTGTTCTATTTTGCATCCTGTATCTTATGTTGCTTTTGGTGTTTTGTGTTGTGTGTCAACGATTAAGCCAACTAATTCTCTACCATATATAACTTCTGGACATTTTTGATACAACATCTTAATTCTTTGTAGATATGGAGATAGGTACAGAACTATATTCTAATGCCCCACAATGGGGCTATGAGAGGGGACAGATGGATGGGCAAAGAATAGTTTTGTTTAACATATTAGGTCATAGTTCTTGATTAGTTTTTTTAGTTAAAGATAAACACATAGGGTGTGATTTCTATACCAAAGATATGCTTATTTCAGTATTAGAAAAATATTCTTCTTACATCTCCTGAAAATTGCAATTTTTAAAATGTGTAAAAATAAATTATTATTAAAAGCACATTTTATTTCCATTTGTTTGGATTCATTACCttaaaactttattgacatatttcaaagatataggaaaggtaaatgatttcaagaaaatccgtgtatttctaccatgcagatgtaataaatgttagcatttggctatattttcttcagacacacatatgcatgtaattgcaaatgttagatacatttgaagtttgctttgttacctgtttgatcctgtcccgttcctccctccccagagtccccagaggtaaccactagagggggcataatatagcatgtgtttttatatttttaatacaaatatattttttaaaagcgctacaaaatattgttttatatAtgtggtagccagcttccagatggccccagtgatccctggcctcctggtgttcatgccccagtatagccttctcctgcattttacagtgctgacttttgtaactaccaggatattgagcaaatgcagtgtgtgatttctgaggcCATATCttttactcttttttttttttttaagagacaagatctcactctattgctcaggctggagtgtggtggcaggatcatagctcactgtaaccttaaacttggactcaaacaatcctcccatctcgcctcctcctataaagcactgggattacaggcATTTTTGCTCATTTTTCTATGTTGTTTTTTTTACTTGTCAGTTTTTAGATATTACATATTTTGAATACTAATGATCTGTTATGTATGTTCCAATTATCTTTTTTAGTCTGGTTTGTCTTCATATTTTGGTTATGAAATCTTGAATTTTTAAAAACGTAATTTTACCAATCTTTCATAATGATTTGCTTTTTCTGGTTTTTGTATAGGAaatgtcataaaaatagtcctattcagccttccaaaagttacaaaatttttgtttttaacatttagatgtttagtccaactgaaatttgttttcttttatggcatgattttggaatcttgttttaattatttttacatatttatagctgttcctccaagtatcaatttttcaaGTGCAACATCTGTCATGCAGTTACTATGTAAGGGCCAGATTCTGACCTTTCTGTTCTTTTTATCtgaaggaaatttgaacatgccacccccaaatatgccgatttggcatactgattatttcgagctaaaggtgcttgactaacagtagttgcagaaatggctattttaactgtcctttcctacctgtagcaagccatacaaacttctttgataaagatgctttcctgataccaagatgagaagatggctctaatcagctgagacagcaccagaggaatctacaaacaagaaactattagtttcttaacatatatttaccttccacagtttctgcctctggaagcctaaaactgctttccttcgtcttgtcacacttctctgaaatgtattctttgtggaagatgctatatagtccagagttgtaagccactacttgtgtttaccttttcattgagttttctcctgtgtgatgtacgttgcatatattaataaaattacttgtttttctcttgttaa