Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name ETF1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name eukaryotic translation termination factor 1
Also known as D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1
Coordinate chr5:138506095-138543236
Strand -
Gene summary This gene encodes a class-1 polypeptide chain release factor. The encoded protein plays an essential role in directing termination of mRNA translation from the termination codons UAA, UAG and UGA. This protein is a component of the SURF complex which promotes degradation of prematurely terminated mRNAs via the mechanism of nonsense-mediated mRNA decay (NMD). Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 6, 7, and X. [provided by RefSeq, Aug 2013]

Retrocopy(s) from ETF1

Retroname Coord Strand Genomic Region ENSG
ETF1P3 chrX:65794344-65798029 + Intergenic
 ENSG00000233833 UCSC
ETF1P1 chr6:30031712-30033864 + Intergenic
 ENSG00000232757 UCSC
ETF1P2 chr7:151502248-151504316 + Intragenic
 ENSG00000240132 UCSC

Expression

Transcript Sequences

>NM_001282185.2
ATAGTAGAATGGCCTGCCTCAGGCCATGTGAAAAGTTGATTTCAGCACAAGAATTTGACATTCTGGTTTCCAGCCCAGGATTGTCATTTATGGGTAGATTTGCAATTTTAGAATGACAGCCCCTCCAAGCTCTTCATTATTACTGTTATATGAAACAGGATGTGCTTAATTGTACTGAAGGCCCAATTCACAGCAATGGCACCAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCGGATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAAAGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTATACTGTGGAACAATTGTAACAGAAGAAGGAAAGGAAAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGATTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAGGAAACACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGCCTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCAGAGACTGCTGTGCAGCTGTTTATTTCTGGGGACAAAGTGAATGTGGCTGGTCTAGTTTTAGCTGGATCCGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTGATCAGAGGTTACAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGTGGTGAAAATGGATTCAACCAAGCTATTGAGTTATCTACTGAAGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAATCAGCCAGGACACGGGCAAGTACTGTTTTGGCGTTGAAGATACACTAAAGGCTTTGGAAATGGGAGCTGTAGAAATTCTAATAGTCTATGAAAATCTGGATATAATGAGATATGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTCTATCTAACTCCAGAGCAAGAAAAGGATAAATCTCATTTCACAGACAAAGAGACCGGACAGGAACATGAGCTTATCGAGAGCATGCCCCTGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACGTTGGAAATTGTCACAGATAAATCACAAGAAGGGTCTCAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGACGATGAATTTTTTGACCTTGATGACTACTAGGTAGTCGACATGGGTCCGGCAAAACGTGCCTCACCCTCCAGCATCCAACCCAAGGAGCATACCCATGGTGGAATCCAAACAGATCCCTGCCTTACAATTGGAACATTTCCAGAACTTAATCCATGAGCATTGGATATTGAAAAGAAAACCGAAACAAAACCAGACCCAGCCCTACACTTTGGTTTGTCATGGTGTCAGCGCAGCAGCCTACAACTAAGTTCCTAAACGCCACTTTGGACTAATTTAAAAAAGAATCCCAGTTTTTACTTTTACTGGATGGTGAAATTGGTTGCTCTTGTATTTTATGAAAAAAAATGATTTTTTTAACCTTCATACATAGAAGCAAAAATACTTTAACTGCTGTAAACCTTCAAAAGTTAATAGAAGTGAGATCATACTGGTTTGTTTCTTATTTTGATTGGAGAAAAATTAAATTGCTGCATTTCGCAGTGACCCATTTACATGGCATTCTCAGCTTAGACTGCGTAAGAAGAAATATATGTGGTGAAATGTTGGAACCATTTCTCTCTTGGTCTCTGTTTAATGTTGAAAGGGTGAGCTAATAGGAGGCACTTTCAACTTCACTCCCTCACGCTACCCCGTCCCCCTCCAGACTGGCAGTTTCAAGGATGCAAATTGCATTGCAAAATCAAACTGACTCATGAAGCATTTGGGCCAGTGCACTGTTTACTTCCATCTGTTTGCAGACACATTTGTGCCCGGCGTTTGGGAGCCCTTTGTATCAATGTTCTGACAAGGGTCCCTATAACCTTAACCTACTCGAAACCGGTTTGGGATGGATATGATGGGGCTTCTGTGCTATTGCTGGGATTGGGAGAAATAAAACATGCAATTTAAGTGGAAGCGAAGAAATTTAAAGAGGATTTTATTTTGCTTGGGTCAATCCTTGTTAAAAGGGAGGTGGATGTGTTTTCCTTGTGTTGGATGGCATGAGATTATGTGAATGTTTTGATTTATTAAAATGAACTGCAAGGTTTTTCACAGGAACGACAGACATGTATGACTGCATGTAATTATAAACTCCTGACCTCCTGGTGGGGTTGGAGCATCTGTTTCAAATGTGGGACTTACAAGCACTTCTCACATGAGAAATTAGGGGCGGGTGGGAAGGGATGGGACACAGCTTCTGGCACCATGGATTTAAGACCATGTTGGATCCAAAAGTTGGCCTGAAACCCTGAAGCTTATGCTTCACAGCTGGGCTGTAAGTCAGACTTGAACCCAGCTGATATGCAAGGTCATGGCGTGCCCAGGGTGGTGACAGTTGAACAAAGTGTATAGTACGTGCCCAGTGGTAGCGATGGAAAAAAGTATACCAAATGGACTTTGAAGGACCAAAGGTTTTAAAAGTCAATTGGTATCACCTCCACACTGACTAGGGTAGTGGGGTGCATTTGGTTTTCAAATTGGGTACTTTTAACACTTTAGTGCCTGACTGCTGTTCTTTACTGACTTGATTCAGTCACTCGTAGCTTTATTGGTCTGAACCAGCTCCTTGTTCCCAGGTTACAGACCTGCCTATCGTTCCAATAATCCTGTTTCACTTGAATGAAGGGAGTATGTCTTAAATGTAAAGTTTCTGGTTCTCACACTGTACTCTGAGGTCCAAATACTGTCTGTCAATGTGTAACCTGATGTCTCAACCCCCTGTGAGAAGAGTCCATTATTTGGTGTTCACCAACGTGGGAGACTTCACCGGAACAGGCTTTTTTGCTTTGGGCTCTGCTATTTGTTTGCAGAACACCCAAGAGCGAGCAAACATGCTCTCTTCACAGCAGTACCTTAGGGTTTTGCCATTGTAAATGGGTCTGATGTGATATGACAAGACCAGAGAAATTGGATGTAAATTTACATTTTTGAATATGCTTGTTGTTTCACATGATACATTTAGGGTATGCAGCTCCTTTTGTAGTTTTTATTTTTACTATTTAAGTTTGGAAATGATGCCAAATTTTTGTATTTCTTTAATCAATGTGTTCTCTTCGGTGatatatattgcattatatattgatgtgtgtatcaatatatattgatatgtattacacttacacatacaaacacatataAGAGGGGGTGAAAACCGTAGCCTTTGCATTCTCTATAGCCTCTGCAGAGAGATACTAAGCAGCAAAATCTTGGTGTTGTGATGTACAGAAATGGAGAAGAGTATTAAACCATATTTAAGAATA
>XM_017009221.2
ATTGCAACACATGCAGCTGCCTGGAGAGAGGGAGCCGGTGTCCTACGTCAGAgccgccgccgccgcggagccgccgccggggaggagcagccgctgccgccCAGGACTGGGCCCTTAGGGAGGAGGAGGCGAGAAGATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAGATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGCCCGCGGCAATGGCACCAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCGGATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAAAGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTATACTGTGGAACAATTGTAACAGAAGAAGGAAAGGAAAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGATTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAGGAAACACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGCCTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCAGAGACTGCTGTGCAGCTGTTTATTTCTGGGGACAAAGTGAATGTGGCTGGTCTAGTTTTAGCTGGATCCGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTGATCAGAGGTTACAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGTGGTGAAAATGGATTCAACCAAGCTATTGAGTTATCTACTGAAGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGAGGAGAAAATTCTCTATCTAACTCCAGAGCAAGAAAAGGATAAATCTCATTTCACAGACAAAGAGACCGGACAGGAACATGAGCTTATCGAGAGCATGCCCCTGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACGTTGGAAATTGTCACAGATAAATCACAAGAAGGGTCTCAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGACGATGAATTTTTTGACCTTGATGACTACTAGGTAGTCGACATGGGTCCGGCAAAACGTGCCTCACCCTCCAGCATCCAACCCAAGGAGCATACCCATGGTGGAATCCAAACAGATCCCTGCCTTACAATTGGAACATTTCCAGAACTTAATCCATGAGCATTGGATATTGAAAAGAAAACCGAAACAAAACCAGACCCAGCCCTACACTTTGGTTTGTCATGGTGTCAGCGCAGCAGCCTACAACTAAGTTCCTAAACGCCACTTTGGACTAATTTAAAAAAGAATCCCAGTTTTTACTTTTACTGGATGGTGAAATTGGTTGCTCTTGTATTTTATGAAAAAAAATGATTTTTTTAACCTTCATACATAGAAGCAAAAATACTTTAACTGCTGTAAACCTTCAAAAGTTAATAGAAGTGAGATCATACTGGTTTGTTTCTTATTTTGATTGGAGAAAAATTAAATTGCTGCATTTCGCAGTGACCCATTTACATGGCATTCTCAGCTTAGACTGCGTAAGAAGAAATATATGTGGTGAAATGTTGGAACCATTTCTCTCTTGGTCTCTGTTTAATGTTGAAAGGGTGAGCTAATAGGAGGCACTTTCAACTTCACTCCCTCACGCTACCCCGTCCCCCTCCAGACTGGCAGTTTCAAGGATGCAAATTGCATTGCAAAATCAAACTGACTCATGAAGCATTTGGGCCAGTGCACTGTTTACTTCCATCTGTTTGCAGACACATTTGTGCCCGGCGTTTGGGAGCCCTTTGTATCAATGTTCTGACAAGGGTCCCTATAACCTTAACCTACTCGAAACCGGTTTGGGATGGATATGATGGGGCTTCTGTGCTATTGCTGGGATTGGGAGAAATAAAACATGCAATTTAAGTGGAAGCGAAGAAATTTAAAGAGGATTTTATTTTGCTTGGGTCAATCCTTGTTAAAAGGGAGGTGGATGTGTTTTCCTTGTGTTGGATGGCATGAGATTATGTGAATGTTTTGATTTATTAAAATGAACTGCAAGGTTTTTCACAGGAACGACAGACATGTATGACTGCATGTAATTATAAACTCCTGACCTCCTGGTGGGGTTGGAGCATCTGTTTCAAATGTGGGACTTACAAGCACTTCTCACATGAGAAATTAGGGGCGGGTGGGAAGGGATGGGACACAGCTTCTGGCACCATGGATTTAAGACCATGTTGGATCCAAAAGTTGGCCTGAAACCCTGAAGCTTATGCTTCACAGCTGGGCTGTAAGTCAGACTTGAACCCAGCTGATATGCAAGGTCATGGCGTGCCCAGGGTGGTGACAGTTGAACAAAGTGTATAGTACGTGCCCAGTGGTAGCGATGGAAAAAAGTATACCAAATGGACTTTGAAGGACCAAAGGTTTTAAAAGTCAATTGGTATCACCTCCACACTGACTAGGGTAGTGGGGTGCATTTGGTTTTCAAATTGGGTACTTTTAACACTTTAGTGCCTGACTGCTGTTCTTTACTGACTTGATTCAGTCACTCGTAGCTTTATTGGTCTGAACCAGCTCCTTGTTCCCAGGTTACAGACCTGCCTATCGTTCCAATAATCCTGTTTCACTTGAATGAAGGGAGTATGTCTTAAATGTAAAGTTTCTGGTTCTCACACTGTACTCTGAGGTCCAAATACTGTCTGTCAATGTGTAACCTGATGTCTCAACCCCCTGTGAGAAGAGTCCATTATTTGGTGTTCACCAACGTGGGAGACTTCACCGGAACAGGCTTTTTTGCTTTGGGCTCTGCTATTTGTTTGCAGAACACCCAAGAGCGAGCAAACATGCTCTCTTCACAGCAGTACCTTAGGGTTTTGCCATTGTAAATGGGTCTGATGTGATATGACAAGACCAGAGAAATTGGATGTAAATTTACATTTTTGAATATGCTTGTTGTTTCACATGATACATTTAGGGTATGCAGCTCCTTTTGTAGTTTTTATTTTTACTATTTAAGTTTGGAAATGATGCCAAATTTTTGTATTTCTTTAATCAATGTGTTCTCTTCGGTGatatatattgcattatatattgatgtgtgtatcaatatatattgatatgtattacacttacacatacaaacacatataAGAGGGGGTGAAAACCGTAGCCTTTGCATTCTCTATAGCCTCTGCAGAGAGATACTAAGCAGCAAAATCTTGGTGTTGTGATGTACAGAAATGGAGAAGAGTATTAAACCATATTTAAGAATA