Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tuba1b
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name tubulin, alpha 1B
Also known as Tuba2
Coordinate chr15:98829310-98832271
Strand -
Gene summary Predicted to enable GTP binding activity; double-stranded RNA binding activity; and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of cytoskeleton. Acts upstream of or within cellular response to interleukin-4. Located in cytoplasmic microtubule. Is expressed in several structures, including genitourinary system; hemolymphoid system gland; liver; retina layer; and stomach. Orthologous to human TUBA1B (tubulin alpha 1b). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tuba1b

Retroname Coord Strand Genomic Region ENSG
Tuba1bP6 chr13:112730118-112731674 - Intergenic
ENSMUSG00000114547 UCSC
Tuba1bP8 chr17:5160888-5162434 - Intragenic
ENSMUSG00000081783 UCSC
Tuba1bP9 chr18:68040698-68041986 + Intergenic
ENSMUSG00000118326 UCSC
Tuba1bP10 chr18:82356531-82358093 + Intergenic
ENSMUSG00000058625 UCSC
Tuba1bP1 chr2:151300820-151302373 + Intragenic
ENSMUSG00000082809 UCSC
Tuba1bP3 chr8:65583678-65585002 - Intragenic
Intragenic
ENSMUSG00000109935 UCSC
Tuba1bP4 chr9:31846589-31848151 - Intergenic
ENSMUSG00000091639 UCSC
Tuba1bP5 chr9:90979145-90980705 + Intragenic
ENSMUSG00000056904 UCSC
Tuba1bP7 chr17:30396545-30397685 + Intragenic
ENSMUSG00000117974 UCSC
Tuba1bP2 chr3:50324301-50325211 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_011654.2
CGAGACCCGGTGTCTGCTTCTATCTCTCACCCTCGCCTTCTAACCCGTTGCTATCATGCGTGAGTGCATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATCGGCAATGCCTGCTGGGAGCTCTACTGCCTGGAACATGGCATCCAGCCTGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCAACACCTTCTTCAGTGAGACAGGAGCTGGCAAGCATGTGCCCCGGGCAGTGTTCGTAGACCTGGAACCCACGGTCATCGATGAAGTTCGCACCGGCACCTACCGCCAGCTCTTCCATCCTGAGCAGCTCATCACAGGCAAGGAGGATGCTGCCAATAACTATGCCCGTGGCCACTACACCATTGGCAAGGAGATCATTGACCTTGTCCTGGACAGGATTCGCAAGCTGGCTGACCAGTGCACAGGTCTCCAGGGCTTCTTGGTTTTCCACAGCTTTGGTGGGGGAACTGGCTCTGGCTTCACCTCCCTGCTGATGGAGCGGCTCTCTGTGGATTACGGAAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCcaggtttccactgctgtggttGAGCCCTACAATTCCATCCTCACCACCCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAATGAGGCCATCTATGACATCTGTCGTAGAAACCTCGACATTGAGCGCCCAACCTACACCAACCTTAACCGCCTTATTAGCCAGATTGTGTCTTCCATCACTGCTTCCCTCAGATTTGATGGGGCCCTGAATGTTGATCTGACAGAATTCCAGACCAACCTGGTACCCTACCCTCGCATCCACTTCCCTCTGGCCACTTATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCATGAGCAGCTTTCTGTAGCAGAGATCACCAATGCCTGCTTTGAGCCAGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTGCTATACCGTGGTGATGTGGTTCCCAAAGATGTCAATGCTGCCATTGCCACCATCAAGACCAAGCGCAGCATCCAGTTTGTAGACTGGTGCCCCACTGGCTTCAAGGTTGGCATTAATTACCAGCCTCCCACTGTGGTACCCGGTGGTGACCTGGCCAAGGTGCAGAGAGCTGTGTGCATGCTGAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTAGATCACAAGTTTGATCTGATGTATGCCAAGCGTGCCTTTGTGCACTGGTATGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGTGAGGACATGGCTGCCCTAGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTGGAAGgcgagggggaggaagaaggagaggagtaCTAAGTCCATTCCTTGAGCCCCCTGTGTCGTCAAACTGCTCCAGTATTAGTTGCAGGCACTGATGCTTCTGTGCTGTTTCCATTCTGTGATCATGTCTTCTCCATGTTGTACCTCTTAAGTTTTCCATGATGTCTCAAAGTAAAAGCTTTAAGAAAA