Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Casp3
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name caspase 3
Also known as CPP32-beta|Lice|Yama
Coordinate chr16:48845011-48863249
Strand -
Gene summary Enables several functions, including death receptor binding activity; phospholipase A2 activator activity; and protease binding activity. Involved in several processes, including luteolysis; nervous system development; and positive regulation of amyloid-beta formation. Located in cytosol; membrane raft; and neuronal cell body. Part of death-inducing signaling complex. Used to study artery disease (multiple); brain disease (multiple); and pre-malignant neoplasm. Biomarker of several diseases, including artery disease (multiple); brain disease (multiple); diabetes mellitus (multiple); heart disease (multiple); and pancreatitis (multiple). Human ortholog(s) of this gene implicated in Parkinson's disease; colon cancer; lung non-small cell carcinoma; and stomach cancer. Orthologous to human CASP3 (caspase 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Casp3

Retroname Coord Strand Genomic Region ENSG
Casp3P2 chr8:60390953-60393052 - Intragenic
 N/A UCSC
Casp3P1 chr5:35062561-35065446 + Intergenic
 N/A UCSC
Casp3P3 chr9:101235259-101237679 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_012922.2
GGGATCAAAGCTTAGTGTCCTGAGGTGCGGAGCTTGGAACGCGAAGAAAAGTGACCATGGACAACAACGAAACCTCCGTGGATTCAAAATCCATTAATAATTTTGAAACAAAGACTATCCATGGAAGCAAGTCGATGGACTCTGGAATATATCTGGACAGCAGTTACAAAATGGATTACCCTGAAATGGGCTTGTGTATAATAATTAATAATAAGAACTTCCATAAAAGCACTGGAATGTCAGCTCGCAATGGTACCGATGTCGATGCAGCTAACCTCAGAGAGACATTCATGGCCCTGAAATACGAAGTCAGGAATAAAAATGACCTTACTCGTGAAGAAATTATGGAATTGATGGATAGTGTTTCTAAGGAAGATCACAGCAAAAGGAGCAGTTTTGTGTGTGTGATTCTAAGTCATGGAGATGAAGGAGTAATTTTTGGAACGAACGGACCTGTGGACCTGAAAAAACTAACTAGTTTCTTCAGAGGCGACTACTGCCGGAGTCTGACTGGAAAGCCGAAACTCTTCATCATTCAGGCCTGCCGAGGTACAGAGCTGGACTGCGGTATTGAGACAGACAGTGGAACTGACGATGATATGGCATGCCAGAAGATACCAGTGGAGGCCGACTTCCTGTATGCTTACTCTACCGCACCCGGTTACTATTCCTGGAGAAATTCAAGGGACGGGTCATGGTTCATCCAGTCACTTTGCGCCATGCTGAAACTGTACGCGCACAAGCTGGAATTCATGCACATCCTCACTCGTGTTAACCGGAAGGTGGCCACGGAATTTGAGTCCTTCTCCCTGGACGCCACTTTCCATGCAAAGAAACAGATCCCGTGTATTGTGTCAATGCTCACAAAAGAACTGTACTTTTATCACTAAAGGAATGACTGGGAGTGGGGTAGGGGCATGtttctgttttggtttttttttttggtttttgttttttgtttttttttttttatttGAATGCCAAATGAGAAAACTGTCAGGGAGACTTTTTTTTTCCCCTCTCATTTAAATCAAATCCGATGTTCCAGGTCGTCATTGAACAATACCACTGCCTGCAATGCAGCCACAATACAATACCTCAGCTTTGATATCAGGTAGTTGAAATGAAATTTAATTAGGAACAAATAAATGTCAATAATGGTACAACCATCATAGAAGAAATTGGAAAGTCACACTTTGGTAATTAGAGAGATTTGGTGCCACTATGAATTTGAAATTACGAAGCAGTGATGATCTTATACCCCCTCCTCACATCTAGAATGTCACTTTAGTTTTCGTTAAGCATAGGAACGATAATGTCAAGTGGTATGTCTTAGAACTTGAATCCACGAGCAGAGTCAAAGGCTGGTTTTGGAACTGATCTGTGGAAATGAAGAGTTGGAGCACTGTAGCACACATTATAGCTACTGGTTTTGTGACAGTTGACCAGGTCACATATTTATTATTTAAGACAAAAGTCGTGTTTTATTATTGGAACAAAAATAACTTTATATGAGAGGAAAACCATGTGTGAACTTGGTTGGCTTGTTGAAGGCTACCATCCTTCAGTGGTGGACATGACGACAGGGTGCTACGATCCACCAGCATTTGTTTCTTACTTATTCTTATGCAAATCAGCCTAATTTTACAGACCAGCAAAATATCTAAAGAGCGATTATGCAGCAGCCTCAAATTGTTGACTATTAGAATGGAATAAAGGAATTCTACAGGAACAGACCATAATACCAGCTGTCAGTCAGAGCGTAAGGAAAGGAGAGGTGGCATCTCCTGTGATTGGAGAGAAGATGGTTTGAGCCGGAGCAGAGCCATGGGCACGTCTTCAGAAAAGGCCTGCTAGTTGGACCCACCTTGTGAGCACTGGTCTGTGTGGATGATGTCCAAGTTACCACATGAGACTGAACCAGATCAGAAGCTCCTGCAAAAAGGCTTTCCCAGAGTGCTGAGCATCTCAAGAAAGTTCACTGGACTCCATGTACAGAGTCTGTAGCATGCTGACTTTTCTGTTGAAGTTTACAATGAAAGGAAAATGATGGTGATATTTGTACCGTCACTAGAAATGAAGGGCCCTGGCACACGGGACTTGGAAAGCATCCAGCAATAGGCCCTGCAGCCCATGTGGAGGAGCTGCAGACTGGAGTCCACCCCTCCTCCCCATCAGGGCGTCTGTGCTCCAGGCTTCCTTAATCATGGAGGTGCTGAGTCATCGCTGGCTCTCCCTGTGGGTCCAGCATTTCCCATAAGCCTCCTTATTGCACAAAGAAAGGAAGGAACTCACATTATAACTGATAGTAGGTTCTTGTTTAGACTGGATTTACTGTTAACTCTTTTCTAAGTAAATACAGCATGTGGTGGTATTTTAAAATGTGTTCCCATGTGACAATTTTATAAAAGTCAGATATCTTGCATTTTTATTTCAAAACATAAATTCAGATTTAAAATTA
>XM_006253130.3
tgggcgggaccggcggTAGGCTGCTGATGCAGTGTTGGTGTTGGTGGGATCAAAGCTTAGTGTCCTGAGGTGCGGAGCTTGGAACGGTACGCGAAGAAAAGTGACCATGGACAACAACGAAACCTCCGTGGATTCAAAATCCATTAATAATTTTGAAACAAAGACTATCCATGGAAGCAAGTCGATGGACTCTGGAATATATCTGGACAGCAGTTACAAAATGGATTACCCTGAAATGGGCTTGTGTATAATAATTAATAATAAGAACTTCCATAAAAGCACTGGAATGTCAGCTCGCAATGGTACCGATGTCGATGCAGCTAACCTCAGAGAGACATTCATGGCCCTGAAATACGAAGTCAGGAATAAAAATGACCTTACTCGTGAAGAAATTATGGAATTGATGGATAGTGTTTCTAAGGAAGATCACAGCAAAAGGAGCAGTTTTGTGTGTGTGATTCTAAGTCATGGAGATGAAGGAGTAATTTTTGGAACGAACGGACCTGTGGACCTGAAAAAACTAACTAGTTTCTTCAGAGGCGACTACTGCCGGAGTCTGACTGGAAAGCCGAAACTCTTCATCATTCAGGCCTGCCGAGGTACAGAGCTGGACTGCGGTATTGAGACAGACAGTGGAACTGACGATGATATGGCATGCCAGAAGATACCAGTGGAGGCCGACTTCCTGTATGCTTACTCTACCGCACCCGGTTACTATTCCTGGAGAAATTCAAGGGACGGGTCATGGTTCATCCAGTCACTTTGCGCCATGCTGAAACTGTACGCGCACAAGCTGGAATTCATGCACATCCTCACTCGTGTTAACCGGAAGGTGGCCACGGAATTTGAGTCCTTCTCCCTGGACGCCACTTTCCATGCAAAGAAACAGATCCCGTGTATTGTGTCAATGCTCACAAAAGAACTGTACTTTTATCACTAAAGGAATGACTGGGAGTGGGGTAGGGGCATGtttctgttttggtttttttttttggtttttgttttttgtttttttttttttatttGAATGCCAAATGAGAAAACTGTCAGGGAGACTTTTTTTTTCCCCTCTCATTTAAATCAAATCCGATGTTCCAGGTCGTCATTGAACAATACCACTGCCTGCAATGCAGCCACAATACAATACCTCAGCTTTGATATCAGGTAGTTGAAATGAAATTTAATTAGGAACAAATAAATGTCAATAATGGTACAACCATCATAGAAGAAATTGGAAAGTCACACTTTGGTAATTAGAGAGATTTGGTGCCACTATGAATTTGAAATTACGAAGCAGTGATGATCTTATACCCCCTCCTCACATCTAGAATGTCACTTTAGTTTTCGTTAAGCATAGGAACGATAATGTCAAGTGGTATGTCTTAGAACTTGAATCCACGAGCAGAGTCAAAGGCTGGTTTTGGAACTGATCTGTGGAAATGAAGAGTTGGAGCACTGTAGCACACATTATAGCTACTGGTTTTGTGACAGTTGACCAGGTCACATATTTATTATTTAAGACAAAAGTCGTGTTTTATTATTGGAACAAAAATAACTTTATATGAGAGGAAAACCATGTGTGAACTTGGTTGGCTTGTTGAAGGCTACCATCCTTCAGTGGTGGACATGACGACAGGGTGCTACGATCCACCAGCATTTGTTTCTTACTTATTCTTATGCAAATCAGCCTAATTTTACAGACCAGCAAAATATCTAAAGAGCGATTATGCAGCAGCCTCAAATTGTTGACTATTAGAATGGAATAAAGGAATTCTACAGGAACAGACCATAATACCAGCTGTCAGTCAGAGCGTAAGGAAAGGAGAGGTGGCATCTCCTGTGATTGGAGAGAAGATGGTTTGAGCCGGAGCAGAGCCATGGGCACGTCTTCAGAAAAGGCCTGCTAGTTGGACCCACCTTGTGAGCACTGGTCTGTGTGGATGATGTCCAAGTTACCACATGAGACTGAACCAGATCAGAAGCTCCTGCAAAAAGGCTTTCCCAGAGTGCTGAGCATCTCAAGAAAGTTCACTGGACTCCATGTACAGAGTCTGTAGCATGCTGACTTTTCTGTTGAAGTTTACAATGAAAGGAAAATGATGGTGATATTTGTACCGTCACTAGAAATGAAGGGCCCTGGCACACGGGACTTGGAAAGCATCCAGCAATAGGCCCTGCAGCCCATGTGGAGGAGCTGCAGACTGGAGTCCACCCCTCCTCCCCATCAGGGCGTCTGTGCTCCAGGCTTCCTTAATCATGGAGGTGCTGAGTCATCGCTGGCTCTCCCTGTGGGTCCAGCATTTCCCATAAGCCTCCTTATTGCACAAAGAAAGGAAGGAACTCACATTATAACTGATAGTAGGTTCTTGTTTAGACTGGATTTACTGTTAACTCTTTTCTAAGTAAATACAGCATGTGGTGGTATTTTAAAATGTGTTCCCATGTGACAATTTTATAAAAGTCAGATATCTTGCATTTTTATTTCAAAACATAAATTCAGATTTAAAATTA