| Gene Name | Hmgb1 |
|
| Specie | Rattus norvegicus | |
| Full Name | high mobility group box 1 | |
| Also known as | Ac2-008|Hmg1 | |
| Coordinate | chr12:7082529-7090246 | |
| Strand | + | |
| Gene summary | Enables several functions, including DNA binding activity; heparin binding activity; and signaling receptor binding activity. Involved in several processes, including positive regulation of DNA ligation; positive regulation of cytokine production; and response to bacterium. Acts upstream of or within several processes, including DNA geometric change; induction of positive chemotaxis; and positive regulation of mesenchymal cell proliferation. Located in several cellular components, including cytosol; extracellular space; and membrane raft. Used to study congestive heart failure; high grade glioma; myocardial infarction; pulmonary hypertension; and sciatic neuropathy. Biomarker of several diseases, including atherosclerosis; colon adenocarcinoma; hydrocephalus; middle cerebral artery infarction; and obstructive jaundice. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis. Orthologous to human HMGB1 (high mobility group box 1). [provided by Alliance of Genome Resources, Apr 2022] |
| Retroname | Coord | Strand | Genomic Region | ENSG | |
|---|---|---|---|---|---|
| Hmgb1P1 | chr1:103568457-103568969 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P2 | chr1:112897520-112898029 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P3 | chr1:137911416-137913540 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P4 | chr1:162790454-162790967 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P5 | chr1:16957014-16958312 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P6 | chr1:173648755-173649962 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P7 | chr1:205231013-205232259 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P8 | chr1:232897839-232898370 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P9 | chr1:243107690-243109137 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P10 | chr1:53912926-53913432 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P11 | chr1:62944954-62945430 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P12 | chr1:81088089-81089302 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P13 | chr2:157897014-157897543 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P14 | chr2:186398819-186399287 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P15 | chr2:190279315-190279846 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P16 | chr2:196013206-196013727 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P17 | chr2:198745889-198746398 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P18 | chr2:219583020-219583214 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P19 | chr2:224925650-224926827 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P20 | chr2:55612109-55612457 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P21 | chr2:94902802-94903329 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P22 | chr3:101434752-101435216 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P23 | chr3:146219947-146220453 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P24 | chr3:149741254-149741780 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P25 | chr3:2028810-2029288 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P26 | chr3:28307243-28307683 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P27 | chr3:5354438-5354679 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P28 | chr3:65383382-65384588 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P29 | chr3:80770227-80771418 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P30 | chr4:106076416-106076832 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P31 | chr4:181405292-181405816 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P32 | chr4:60546862-60548078 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P33 | chr4:65442565-65443773 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P34 | chr4:66091595-66092110 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P35 | chr4:92431662-92433424 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P36 | chr4:97319821-97320266 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P37 | chr5:109768978-109769289 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P38 | chr5:135516807-135517938 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P39 | chr5:33376344-33377559 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P40 | chr6:109660822-109661055 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P41 | chr6:3353219-3353732 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P42 | chr6:85520626-85521134 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P43 | chr7:132982958-132984167 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P44 | chr7:13348333-13349552 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P45 | chr7:18260531-18260862 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P46 | chr7:50391201-50391723 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P47 | chr7:71219773-71220949 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P48 | chr7:73247080-73248437 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P49 | chr7:83186881-83187061 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P50 | chr8:4345750-4346226 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P51 | chr8:77212270-77212782 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P52 | chr9:106659572-106660098 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P53 | chr9:37593044-37593436 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P54 | chr9:51013739-51014932 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P55 | chr9:54082787-54085016 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P56 | chr9:86711371-86711636 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P57 | chr9:9607912-9608222 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P58 | chr10:104249646-104250855 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P59 | chr10:22243397-22244543 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P60 | chr10:2432274-2432691 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P61 | chr10:40993703-40994929 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P62 | chr10:83860927-83861454 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P63 | chr11:12351171-12351591 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P64 | chr13:30537642-30538904 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P65 | chr13:5480116-5481309 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P66 | chr14:2556464-2556926 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P67 | chr14:53005941-53006143 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P68 | chr15:16830721-16831996 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P69 | chr15:9664129-9664513 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P70 | chr16:27472216-27472736 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P71 | chr16:37500016-37502240 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P72 | chr16:41186901-41187187 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P73 | chr17:15320759-15321072 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P74 | chr17:30736067-30736592 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P75 | chr18:1997968-1998403 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P76 | chr18:39064888-39066071 | - |
Intragenic |
N/A | UCSC |
| Hmgb1P77 | chr18:43820970-43822127 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P78 | chr18:49701239-49701719 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P79 | chr18:75861634-75862796 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P80 | chr19:59984230-59985446 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P81 | chrX:115351056-115352262 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P82 | chrX:125146070-125146590 | + |
Intragenic |
N/A | UCSC |
| Hmgb1P83 | chrX:133509408-133509929 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P84 | chrX:152764279-152764810 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P85 | chrX:21440458-21440825 | + |
Intergenic |
N/A | UCSC |
| Hmgb1P86 | chrX:42685379-42685771 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P87 | chrX:5254367-5254884 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P88 | chrX:72561781-72561988 | - |
Intergenic |
N/A | UCSC |
| Hmgb1P89 | chrY:602361-603593 | + |
Intergenic |
N/A | UCSC |
| >NM_012963.2 |
| CGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCGGAGGAAAATCAACTAAACATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAGTTCTCCAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATATGGCAAAGGCTGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAGGGGAGACCAAAAAGAAGTTCAAGGACCCCAATGCCCCCAAGAGGCCTCCTTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCAAAAATCAAAGGCGAGCATCCTGGCTTATCCATTGGTGATGTTGCGAAGAAACTAGGAGAGATGTGGAACAACACTGCTGCGGATGACAAGCAGCCCTATGAAAAGAAGGCCGCCAAGCTGAAGGAGAAGTATGAGAAGGGTGCACAGCACAAATTAGTTATATATGGGGACAGTAGTTTGGtttttggtttcttttttttttttttttttggttttggtttttttccttttgttttttttttCCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAGGTAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTGCAAAAAAATGGCGGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTACTGTTGTCCTTTTCATAGGTCTGAAAGTTTTCTTCTCAAGGGGAAGCTAGTCTTTTGCTTTTGCCCATTTTGGGTCACATGGATTATTAGTGTGTATCTTCATATAGTTGGAAAAATCTTTTGTCCACACACCCTGCATATTGTGGTAGGGGTAACATTTTCATCTACAGTTGAAGAATTCTCCAAAATTGTGATCAGTTGGATAAGAGATACTCTACTTAGCAAAGCAAGGAGTGATCAATTCTGTCACACCATGGGATTATTAGATCAAACAGTCTGAAAGTCTGTCCTTGAAGGACTAATAGAAAAGTATGTTCTGCTCCTTACCTGAGGACTCCTTTAACTGCCATTACTGTGTAATGACAGTTATATTTTGCAGTTTCCCCTACTAAAGACCTGAGAATGTATCCCCAAAAGCGTGAGCTTAAAATACAAGATTGCTGTACTATTTGTTGACCTTAGTCCCAGCGAAGGCTATCATGAGAAGCTGGCTGTAATGCCTTTGCCCTTCTATCTAAATACGGATTGCTCAGGAAACTTGACTGTTTAAAGGTATATTTAATTAGTTGAGCCAGCTTTTAAAATTATGCCACATTTAAAATGAAGGGTATATTTTCCTATATTGTGGTTTGTCCCTTTATAAATCAGATACAAGGAAAGCGGATAAACTTTGCATATTAGTACCAGTTGTCCAAGCCATTTGCTTTTTCTTTATAAAGCCCGAACTCATTCATTAATCATGTTTAATCTGCTTAGTTTAGGGAACAATTTGGCAATTTTGTGGGttttctttttttctttttctttttttttttttttttGAGATTATCATTCTCTTAAAGTGCCAGTGTTTTAAAATAGCGTTCTTGTAATTTTCCGCGCTTTTGTGATGGAGTGCTGTTATATCATTTTGACTTGGGTTCTTTACAGTTGCCTTTGTTCTGTAATTTGAGGAGGAATACTGAACATGAGTCCTGGATGATACTAATAAACTAATAATTGCAGAGGTTTTAAA |