Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SVIP
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small VCP interacting protein
Also known as -
Coordinate chr11:22812429-22829865
Strand -
Gene summary Endoplasmic reticulum-associated degradation (ERAD) is the pathway by which misfolded proteins in the endoplasmic reticulum are targeted to the proteasome for degradation. Multiple specialized proteins interact with one another during ERAD to complete this process. The protein encoded by this gene is an inhibitor of ERAD, functioning to disrupt the interaction of these protein components. This downregulation of ERAD may be needed to protect the cell from overactive protein degradation. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2016]

Retrocopy(s) from SVIP

Retroname Coord Strand Genomic Region ENSG
SVIPP1 chr1:97490535-97491058 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001320340.1
GCGAGGACGGGTGGACGCGTCAGGAGGGTCGTTGGGTCCTGTCAGAGCGACCTAGGCCGTCGCCTCCGTGTAGATCTCCACTTTTGTAACAAAAAGTTGTCGAAAGGCGGCTGTGGCGTCTTTCTACCTTCCACTGACTTTAGCTGCGCCGGATCTTCATAGGGCGCCGGCGCACGCAGAGGGCGTTACGCGTGGGACATTCCGGGGGATGTGGTAGATGGAATTCGGCGCGAAAAGACATTGCTTTCTCCGGGAGCTCTTTAGTCGTCTAGGAGATGAAGAGAAAAGAGCAAAGCTTGCAGAGGCTGCAGAGAGAAGACAAAAAGAGGCTGCATCTCGGGGAATTTTAGATGTTCAATCTGTGCaagaaaagagaaagaaaaaggaaaaaatagaaaaacaaaTTGCTACATCCGGGCCCCCACCAGAAGGTGGACTTAGGTGGACAGTTTCATAAAGCATAACATGAGTAGAAGAATCTACTGCCAATAACTGTTTATTATCTGCAATCAAGTGGGCTTCATCAATTTAATTTCTTCTCTTTGAGTAAATGAAGATTCAGACTTTGTAATATTATTGCCCTTAAGTGCAATGCTAAAAAAACGTTGATTTTCAAGCTTAGAGAATGGCTAGACTTTTCATTAAATACTGATTTTCCTACATTTGCTCTTCTGCAGTTAGTGGGTGATTTGCTATTTTTCTTAGTAGTTAAAAAATGGAACTAAATAGTGAATATACATACACTGCATGTAAACATTCTGCATATACCTCTAAGATTAAAATTCGCAGTTGTCTTTTCATCCTTTATAAAATGATCTAACTACTTATATTTGTGCTGCATCGCGTTACATCTGTTTTTATTTCACTATGAAGATGTTTGATTAAACTTATGGACTTAGTGCCTTTAAACTGATCATCAGGGAGAATCTTGAAAAAATCATTTGAAGGGCTGATGTGAAGGAGCACTGTAAATTTTTATAACTTAGTAATGAGTATTCTTAGGCAGATGTAAAATTTTTTCCAATTTATTTTTATTTATGTAGCTTATAAAATTAACATACCCTGTTTTACTTTATGATAAAGGATTTTTTGTTTGCTGAATTTAAAATTATATATTAGTGATACCATCAGAGGGCAGTGATGTTCTATTGTATATTAAATTCAGCTCTGTAAGGATCTTTGTAGTAATTGAATGAGTTAAACTAATAATCTGGATGGGTTATAATGAGTAGTAATATATTTGTCCATATTTCATAAGTAGTGTTAATCTTGTGTACTTATTAGAGAACGATCATAAGATTTATACAGATGTGAAACTGCGAAGGCAAGTATGAATGTATGAAAAAAACATGTAGGTACTGTACTTACAAAAGGTCTACTTCAGATATAAAAATATTAGGTAATTCTATACAATGCATAGTCATAAACCTTAACATTTTTGTTCATTAGAAACATGAATTTTATAGCATTTTTTGTTTCTCCTATATAATACACTGAAATAAAAGAATTTGTGTTAGCTATTAAGGCTGATAGCTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATATTAAGTGCTAATAGAAATTTTAAGTTAAATCGACCAAGTTCACTTGCTTTACACAAAGGAAACTGAGCCACTATCTTCATCTACCCCTCCAACAAAAATTATGTTATACTGCAGTGTATTGTACATGTTAATTTTTAAAAGTTTGAACTATTATATAATACAGGTCTCTTGACTTCTCATGGAAAAATTATTTTTTCTATTATGGTGTGAAATATTGTGTGAATATCTAGGCAAAACATAACAATTTGGCTCAATTTTCTTCTTTAGAGGATTCGTGCTGTTTTTGTTCATAAAGGGTAGTGAAATCATTGAACTATATTTTAGAATGAAAATTTTTGATTTTATTAAAATGATTTTTTCAAGGCAGAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCATCCTTGAACTCTGCAAATCCTTTCTTCCATTTTAATATAGCAAGAACAATTTTGTCTTTACTACATCTTAAAGAATTAGAACTTGGGTTGGTGTAAGTGACTTACTTCCAGGGAATCATGCCCTATTTCTACCAGCAGGTCATACCCAAATGTCACACTATCTATTGTTAACCATGAATGATATTCAGATCTATTACTTTTCGTGAAAAGTGGAACATGTTACTTCCAACCATGGCCTGTCACCGTGAGTGTGATCAGCTTTCTCCAAAACCACATGGGTCGCAGGAGCTAAGGGGTGGTACCCAAATGTTAGGAACAGTGTTAGGAAAGGGCAAGGGAAAAGAAGTGACTGGATGTCTTATGAGAAACCGGTAAATGACTAAAAAAAAAAGCAAATGACTAAAAACATGACTAAAAAATtatatatatatataatatatatattatatatgtgtgtatatatataCACATAATATCTGCAAATTCTAATTTATATATGTGTGTGTATATacacacacacacatgcacatacacacatacGTCCAGACATCTCCCTCATAAAATAACCATCAGTTTCTATGAAAACCTTAAGTGGAAGCCAATTTCCCATAGTAAATAATTTAGGAGAAAATTATAATGCTTAAAATGTTGCTCAAACCCCTGACCTATTACTAAACTATAATTGGAACAGTAAAATGCATATATGTAACTATCATATCATGATTTAAAATTGCTTAAACCATTGCTGCTTAATACTAATCAAACTTAACGGCTGCTAACAAAAGTTGTGAATTATTACACGGCCTCTTTGTAACGTGCTGCATGTTTTTTAAAACATCTCTGTGTTTCTGTTTGTTCCACTGCTGGTATTTGGAATGTAATTTAACAGTTCTCACACATGGTTTGGTTATAAATTCTGTATTGCCTTTTAGGGATATAAATATACATTTTTTTCTATGTAAAAATTAGCTTTAGCTGTCTCTTTAACAAAATTTTATCTTTACTACATCCTAAATACTTAGAACCTGAGTTGGTGGTTAGGGAAACCTCAGGAACATTTTAATCACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACAATCCCTGGATTTATAGGTGGATTTTCTATAAAGGAAAAATGATGTAATTAGTATCCTGTTTTTTCCTAAAGAAATAATACTATCATAAAAATTCTGTCTATCCTTTGTACCCCAGGAAAATGGACATGAACTTTGAATTTTCCCTTTCTCCAAATGTTTGACTTTTTATTTTCACTGATAAGCATTATG