Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name stt3a
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Danio rerio
Full Name STT3 oligosaccharyltransferase complex catalytic subunit A
Also known as cb437|itm1|wu:fb38c11
Coordinate chr10:39212898-39233144
Strand +
Gene summary Predicted to enable dolichyl-diphosphooligosaccharide-protein glycotransferase activity. Predicted to be involved in post-translational protein modification and protein N-linked glycosylation via asparagine. Predicted to act upstream of or within protein glycosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in axial mesoderm; hatching gland; musculature system; notochord; and otic placode. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iw. Orthologous to human STT3A (STT3 oligosaccharyltransferase complex catalytic subunit A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from stt3a

Retroname Coord Strand Genomic Region ENSG
stt3aP1 chr2:26286482-26286735 + Intergenic
 ENSDARG00000092267 UCSC

Expression

Transcript Sequences

>NM_201458.2
TTTAAACGCAGAGAGGGTTGTGTGTGAAAGTGTGGAAGGGCTGGAGTGAGTGAACCGCCGATGAATAAGACTGGTGTCAAGAGTTAGTCCTGCCTCCCGTGTGTAAAGATGACCAAGCTGGGCTTCCTGCGTCTGTCCTATGAGAAACAGGACACCCTGCTGAAGCTGCTCATCCTGTCTATGGCAGCCGTCCTGTCCTTCTCCACCAGACTGTTTTCTGTGCTTCGGTTCGAGAGCGTCATCCACGAGTTTGATCCGTATTTCAATTACCGGACCACTCGCTTCCTGGCAGAAGAGGGATTTTACAAATTCCATAACTGGTTCGATGATCGGGCTTGGTATCCACTTGGGAGGATTATTGGAGGCACCATCTATCCTGGGTTGATGATCACATCAGCAGCTCTATATCACGTGCTGCACTTCTTCCACATCACCATTGACATCCGTAATGTCTGTGTGTTCCTCGCTCCTCTCTTCTCCTCCTTCACCGCTATCGTCACTTACCACTTCACCAAAGAGCTGAAGGATGCAGGCGCTGGGCTTCTGGCTGCCGCTATGATCGCAGTCGTGCCTGGATACATCTCCCGTTCTGTGGCAGGCTCTTATGATAATGAAGGAATTGCCATTTTCTGCATGCTGTTGACGTACTACATGTGGATCAAGGCAGTGAAGTCGGGCTCCATTTATTGGTCATCCATGTGTGCATTGGCATATTTTTACATGGTGTCCTCCTGGGGTGGTTACGTGTTTCTGATTAACCTCATTCCTCTGCACGTGCTGGTGTTGATGCTCACCGGCCGGTTCTCTCATCGCATCTATGTGGCCTACTGCACAGTCTACTGCCTGGGCACCATCCTCTCCATGCAGATCTCTTTTGTTGGATTCCAGCCCGTCCAGTCCTCTGAACACATGGCTGCTTTTGGAGTGTTTGGTCTGTGCCAGATTCACGCTTTTGTCGATTACCTGCGGAGCAAACTGAACGCGCAGCAGTTTGAGGTGTTGTTCAGGAGTGTCATTTCACTGGTCGGGATCATCCTGCTGTCTGTGGGCGGGTTGCTCATGCTGACAGGAAAAATCTCACCTTGGACTGGCCGTTTCTACTCTCTGCTGGATCCATCGTACGCCAAAAACAACATTCCCATCATCGCCTCTGTGTCTGAGCATCAGCCCACCACATGGTCCTCCTACTACTTTGACCTCCAGCTTCTGGTCTTCATGTTTCCAGTTGGCCTTTACTACTGCTTCAACAACCTCTCTGATGCCACGATTTTCATCATCATGTATGGCGTCACCAGCATGTACTTCTCAGCTGTGATGGTGCGTCTCATGTTGGTCCTCGCTCCAGTAATGTGCATCCTGTCTGGCATTGGAGTCTCTCAGGTCCTCACCACCTTCATGAAGAACCTGGATGTCAGTCGACCTGACAAGAAAACCAAGAAGCAGCAGGACTCCACCTACCCAATCAAGAACGAAGTGGCAAGTGGGATGATTCTAGTGATGGCGTTCTTCCTCATCACATACACTTTCCACTCCACCTGGGTGACCAGCGAGGCGTATTCGTCCCCCTCCATCGTGCTTTCTGCTCGCGGTGGCGACGGCAGCCGCATCATCTTTGATGACTTCAGAGAGGCTTATTACTGGCTCAGACACAACACACCAGAGGATGCTAAAGTGATGTCGTGGTGGGATTATGGGTATCAGATAACAGCGATGGCCAATCGAACGATTCTGGTTGACAATAACACTTGGAATAACACTCACATCTCCAGAGTGGGTCAGGCAATGGCCTCCACAGAGGAGAAAGCCTATGAGATTATGCGAGAGCTGGATGTGAGCTACGTCCTGGTGATCTTTGGCGGATTGACCGGATATTCATCTGATGATATTAATAAGTTCCTGTGGATGGTGCGTATCGGTGGCAGCACAGACACAGGGAGGCACATAAAGGAGCACGATTATTACACGCCCACTGGAGAGTTTCGTGTGGACCGCGAGGGCTCTCCTGTCCTGCTCAACTGCCTCATGTACAAGATGTGCTACTATCGCTTCGGCCAGGTCTACACCGAAGCCAAGCGTCCTCCTGGTTACGACAGAGTTCGTAATGCTGAGATTGGCAATAAGGACTTTGAGCTGGACGTGCTGGAAGAAGCTTATACTACAGAGCACTGGCTGGTCAGGATATACAAGGTTAATTTAGCTCTT