| Name | Zebrafish |  |
 |
 |
| Sci Name | Danio rerio | |||
| Assembly_ID | GCF_000002035.6 | |||
| Assembly_Name | danRer11 |  |
||
| # of retrocopies | 195 | |||
| # of Parental genes | 98 |
| Retroname | Chr | Start | End | Strand | Ensembl | |
|---|---|---|---|---|---|---|
| acta2P1 | chr1 | 8649828 | 8651088 | - | N/A | UCSC |
| actb1P1 | chr1 | 53949397 | 53950415 | + | N/A | UCSC |
| actb1P2 | chr13 | 24280629 | 24284130 | + | ENSDARG00000055618 | UCSC |
| actc1bP1 | chr3 | 40526646 | 40528114 | - | N/A | UCSC |
| aldocbP1 | chr3 | 39570712 | 39573752 | + | N/A | UCSC |
| aldocbP2 | chr12 | 4057691 | 4057930 | - | N/A | UCSC |
| btr22P1 | chr7 | 16185518 | 16185682 | - | N/A | UCSC |
| btr22P2 | chr7 | 24187664 | 24187820 | - | N/A | UCSC |
| btr22P3 | chr15 | 18177802 | 18177936 | - | N/A | UCSC |
| btr22P4 | chr19 | 1420959 | 1421154 | + | N/A | UCSC |
| btr22P5 | chr19 | 4046673 | 4047144 | + | N/A | UCSC |
| chrna5P1 | chr1 | 22391488 | 22391691 | - | N/A | UCSC |
| ckmaP1 | chr15 | 23643998 | 23644846 | - | N/A | UCSC |
| cnga4P1 | chr1 | 43894981 | 43895155 | - | N/A | UCSC |
| cox5aaP1 | chr3 | 47756953 | 47757206 | + | N/A | UCSC |
| dbiP1 | chr2 | 43625102 | 43625522 | - | N/A | UCSC |
| eef1daP1 | chr2 | 53072498 | 53072690 | - | N/A | UCSC |
| exorhP1 | chr8 | 54077128 | 54077487 | - | N/A | UCSC |
| ezh2P1 | chr3 | 40392366 | 40392586 | - | N/A | UCSC |
| fabp3P1 | chr3 | 34947407 | 34948215 | - | ENSDARG00000096377 | UCSC |
| fbxo34P1 | chr12 | 10884275 | 10885182 | - | N/A | UCSC |
| glrbaP1 | chr14 | 35721877 | 35722046 | + | N/A | UCSC |
| gyg1aP1 | chr13 | 14717683 | 14718259 | - | N/A | UCSC |
| h3f3cP1 | chr7 | 5905141 | 5905541 | + | ENSDARG00000103819 | UCSC |
| h3f3cP2 | chr7 | 73818012 | 73818426 | + | N/A | UCSC |
| h3f3cP3 | chr25 | 35051702 | 35052094 | + | ENSDARG00000094154 | UCSC |
| h3f3cP4 | chr25 | 36312470 | 36312869 | + | ENSDARG00000114169 | UCSC |
| hecw2bP1 | chr2 | 49888856 | 49889032 | - | N/A | UCSC |
| hpcaP1 | chr20 | 31237917 | 31238246 | - | N/A | UCSC |
| hsc70P1 | chr3 | 26120256 | 26120951 | - | N/A | UCSC |
| hspa8P1 | chr3 | 26113218 | 26114362 | - | ENSDARG00000029688 | UCSC |
| hspa8P2 | chr8 | 24968329 | 24969444 | - | ENSDARG00000056210 | UCSC |
| hspa8P3 | chr8 | 4799321 | 4800465 | + | ENSDARG00000055723 | UCSC |
| LOC100002481P1 | chr10 | 40690417 | 40691399 | + | ENSDARG00000112669 | UCSC |
| LOC100329258P1 | chr4 | 50619979 | 50620204 | + | N/A | UCSC |
| LOC100331451P1 | chr2 | 19508537 | 19508830 | - | N/A | UCSC |
| LOC100331451P2 | chr10 | 34219636 | 34220242 | + | N/A | UCSC |
| LOC100332969P1 | chr18 | 50707477 | 50707932 | + | N/A | UCSC |
| LOC100535622P1 | chr25 | 5864091 | 5864488 | - | N/A | UCSC |
| LOC100537594P1 | chr20 | 53580534 | 53580683 | + | N/A | UCSC |
| LOC101882148P1 | chr13 | 18233322 | 18241256 | + | N/A | UCSC |
| LOC101882501P1 | chr6 | 26135856 | 26136377 | + | N/A | UCSC |
| LOC101882596P1 | chr22 | 2339532 | 2339766 | + | N/A | UCSC |
| LOC101885443P1 | chr2 | 13963285 | 13967142 | - | N/A | UCSC |
| LOC101885443P2 | chr4 | 38910276 | 38912677 | + | N/A | UCSC |
| LOC101885443P3 | chr15 | 41548280 | 41550537 | - | N/A | UCSC |
| LOC101885443P4 | chr20 | 12652982 | 12655383 | - | N/A | UCSC |
| LOC101885443P5 | chr23 | 3724470 | 3726871 | + | N/A | UCSC |
| LOC101885443P6 | chr25 | 32383759 | 32386161 | + | N/A | UCSC |
| LOC101886835P1 | chr20 | 12657735 | 12661096 | - | N/A | UCSC |
| LOC103908614P1 | chr8 | 49390064 | 49390196 | - | N/A | UCSC |
| LOC103910274P1 | chr11 | 31222815 | 31222970 | - | N/A | UCSC |
| LOC103911323P1 | chr7 | 3644246 | 3644541 | - | N/A | UCSC |
| LOC103911323P2 | chr7 | 4797060 | 4797561 | + | N/A | UCSC |
| LOC103912040P1 | chr2 | 6696754 | 6696955 | + | N/A | UCSC |
| LOC103912040P10 | chr15 | 44983554 | 44984883 | + | N/A | UCSC |
| LOC103912040P11 | chr22 | 27548641 | 27550820 | + | N/A | UCSC |
| LOC103912040P12 | chr22 | 31739945 | 31740690 | + | N/A | UCSC |
| LOC103912040P2 | chr3 | 8303894 | 8304640 | + | N/A | UCSC |
| LOC103912040P3 | chr4 | 34989182 | 34989935 | + | N/A | UCSC |
| LOC103912040P4 | chr4 | 42368953 | 42369695 | - | N/A | UCSC |
| LOC103912040P5 | chr4 | 43002704 | 43003457 | + | N/A | UCSC |
| LOC103912040P6 | chr4 | 59274562 | 59274762 | - | N/A | UCSC |
| LOC103912040P7 | chr4 | 63277261 | 63277461 | - | N/A | UCSC |
| LOC103912040P8 | chr7 | 66484228 | 66485023 | + | N/A | UCSC |
| LOC103912040P9 | chr15 | 3238230 | 3238975 | + | N/A | UCSC |
| LOC108179144P1 | chr10 | 19568246 | 19569732 | + | ENSDARG00000078394 | UCSC |
| LOC108181760P1 | chr4 | 69196449 | 69196817 | + | N/A | UCSC |
| LOC108183819P1 | chr23 | 6845874 | 6846063 | - | N/A | UCSC |
| LOC108183922P1 | chr4 | 72323083 | 72324060 | + | N/A | UCSC |
| LOC108183922P2 | chr8 | 49365731 | 49366718 | - | N/A | UCSC |
| LOC108184006P1 | chr4 | 40222758 | 40223951 | + | N/A | UCSC |
| LOC108184008P1 | chr4 | 30459854 | 30460016 | + | N/A | UCSC |
| LOC108184008P2 | chr4 | 45292974 | 45293136 | - | N/A | UCSC |
| LOC108184008P3 | chr4 | 61645249 | 61645411 | - | N/A | UCSC |
| LOC108184008P4 | chr4 | 64583104 | 64583266 | + | N/A | UCSC |
| LOC108191559P1 | chr10 | 40598757 | 40599122 | + | N/A | UCSC |
| LOC110437726P1 | chr4 | 76416675 | 76416875 | + | N/A | UCSC |
| LOC110438201P1 | chr8 | 39706099 | 39712686 | - | N/A | UCSC |
| LOC110438495P1 | chr20 | 53577789 | 53578151 | + | N/A | UCSC |
| LOC110438679P1 | chr4 | 39097675 | 39099474 | + | N/A | UCSC |
| LOC110438679P2 | chr4 | 49223412 | 49225164 | + | N/A | UCSC |
| LOC110438679P3 | chr4 | 50610790 | 50612543 | + | N/A | UCSC |
| LOC110438689P1 | chr11 | 40056015 | 40056598 | - | N/A | UCSC |
| LOC110438863P1 | chr10 | 34085800 | 34086233 | + | ENSDARG00000094713 | UCSC |
| LOC110438863P2 | chr13 | 9020416 | 9020849 | - | N/A | UCSC |
| LOC110438863P3 | chr21 | 4323763 | 4324188 | + | N/A | UCSC |
| LOC110439490P1 | chr3 | 58108506 | 58110154 | - | ENSDARG00000097337 | UCSC |
| LOC110440176P1 | chr1 | 13598742 | 13599657 | - | N/A | UCSC |
| LOC110440176P2 | chr1 | 30078749 | 30079666 | + | N/A | UCSC |
| LOC110440176P3 | chr4 | 21026001 | 21032466 | + | N/A | UCSC |
| LOC110440176P4 | chr7 | 53075988 | 53082455 | - | N/A | UCSC |
| LOC110440176P5 | chr8 | 27409701 | 27416171 | - | N/A | UCSC |
| LOC110440176P6 | chr9 | 45643600 | 45650067 | - | ENSDARG00000068945 | UCSC |
| LOC110440176P7 | chr14 | 18991911 | 18999946 | + | N/A | UCSC |
| LOC110440176P8 | chr15 | 12688267 | 12692570 | + | N/A | UCSC |
| LOC565905P1 | chr3 | 2405837 | 2414452 | - | N/A | UCSC |
| LOC796940P1 | chr4 | 69911805 | 69912419 | - | N/A | UCSC |
| LOC798522P1 | chr1 | 23413393 | 23416872 | + | N/A | UCSC |
| lrrc8aaP1 | chr5 | 64844509 | 64845496 | + | N/A | UCSC |
| magohP1 | chr12 | 49091116 | 49091581 | + | N/A | UCSC |
| mif4gdaP1 | chr16 | 9015211 | 9015615 | - | N/A | UCSC |
| myl13P1 | chr5 | 64167777 | 64167993 | - | N/A | UCSC |
| namptaP1 | chr11 | 4284388 | 4285818 | - | ENSDARG00000100321 | UCSC |
| namptaP2 | chr18 | 33780260 | 33781681 | + | N/A | UCSC |
| ndufb4P1 | chr3 | 19434060 | 19434403 | - | N/A | UCSC |
| nlgn2bP1 | chr11 | 9566115 | 9566279 | - | N/A | UCSC |
| nlgn2bP2 | chr14 | 14502372 | 14502527 | + | N/A | UCSC |
| nr2f6aP1 | chr16 | 46295153 | 46295314 | + | N/A | UCSC |
| nrasP1 | chr10 | 39722878 | 39723033 | - | N/A | UCSC |
| pimr128P1 | chr11 | 38893711 | 38895548 | - | N/A | UCSC |
| pimr128P2 | chr11 | 42114035 | 42116336 | + | N/A | UCSC |
| pimr128P3 | chr20 | 43596366 | 43597100 | - | N/A | UCSC |
| plk3P1 | chr18 | 3673677 | 3674080 | - | N/A | UCSC |
| prkcqP1 | chr11 | 18353024 | 18353245 | - | N/A | UCSC |
| rac1aP1 | chr1 | 56939648 | 56939800 | - | N/A | UCSC |
| rap2cP1 | chr1 | 2222371 | 2222664 | + | N/A | UCSC |
| rap2cP2 | chr9 | 963656 | 963925 | + | N/A | UCSC |
| rom1bP1 | chr5 | 67138069 | 67138279 | - | N/A | UCSC |
| rpl38P1 | chr16 | 49249717 | 49249890 | + | N/A | UCSC |
| rpl4P1 | chr2 | 16508823 | 16512422 | - | ENSDARG00000095752 | UCSC |
| rpl9P1 | chr10 | 25948932 | 25949577 | + | N/A | UCSC |
| rps11P1 | chr8 | 26702683 | 26703219 | - | ENSDARG00000093606 | UCSC |
| si:ch211-196c10.15P1 | chr5 | 53616683 | 53619419 | - | N/A | UCSC |
| si:ch211-196c10.15P2 | chr7 | 63517043 | 63518725 | + | N/A | UCSC |
| si:ch211-196c10.15P3 | chr8 | 30320623 | 30325760 | + | N/A | UCSC |
| si:ch211-196c10.15P4 | chr9 | 53596019 | 53601082 | - | N/A | UCSC |
| si:ch211-196c10.15P5 | chr10 | 19612348 | 19614029 | + | N/A | UCSC |
| si:ch211-196c10.15P6 | chr15 | 23796331 | 23801447 | + | N/A | UCSC |
| si:ch211-196c10.15P7 | chr15 | 32742724 | 32747863 | + | N/A | UCSC |
| si:ch211-196c10.15P8 | chr22 | 24925695 | 24930932 | - | N/A | UCSC |
| si:dkey-210i3.1P1 | chr3 | 34652143 | 34657002 | - | ENSDARG00000037914 | UCSC |
| si:dkey-210i3.1P10 | chr14 | 12597587 | 12598773 | + | N/A | UCSC |
| si:dkey-210i3.1P11 | chr16 | 10204582 | 10204980 | + | N/A | UCSC |
| si:dkey-210i3.1P12 | chr18 | 5477282 | 5482135 | - | N/A | UCSC |
| si:dkey-210i3.1P13 | chr19 | 20143852 | 20148724 | - | ENSDARG00000074359 | UCSC |
| si:dkey-210i3.1P14 | chr19 | 9771414 | 9776325 | - | ENSDARG00000077877 | UCSC |
| si:dkey-210i3.1P15 | chr20 | 34374738 | 34379653 | + | ENSDARG00000079036 | UCSC |
| si:dkey-210i3.1P16 | chr20 | 51168647 | 51173504 | + | ENSDARG00000094456 | UCSC |
| si:dkey-210i3.1P2 | chr6 | 21504207 | 21509040 | - | N/A | UCSC |
| si:dkey-210i3.1P3 | chr8 | 23245341 | 23250196 | + | ENSDARG00000094197 | UCSC |
| si:dkey-210i3.1P4 | chr9 | 15837142 | 15841990 | + | ENSDARG00000075996 | UCSC |
| si:dkey-210i3.1P5 | chr9 | 31758669 | 31763511 | - | ENSDARG00000079126 | UCSC |
| si:dkey-210i3.1P6 | chr11 | 12771872 | 12776735 | - | N/A | UCSC |
| si:dkey-210i3.1P7 | chr11 | 39208186 | 39213045 | - | N/A | UCSC |
| si:dkey-210i3.1P8 | chr13 | 45331947 | 45336797 | + | ENSDARG00000079524 | UCSC |
| si:dkey-210i3.1P9 | chr13 | 51884358 | 51889438 | - | N/A | UCSC |
| si:dkey-237m9.1P1 | chr4 | 48021072 | 48022279 | + | N/A | UCSC |
| si:dkey-241l7.2P1 | chr6 | 29797413 | 29797698 | + | N/A | UCSC |
| si:dkey-241l7.2P2 | chr16 | 51732473 | 51732606 | - | N/A | UCSC |
| si:dkey-241l7.5P1 | chr10 | 35851461 | 35851732 | - | N/A | UCSC |
| si:dkey-241l7.5P2 | chr12 | 6248777 | 6248942 | + | N/A | UCSC |
| si:dkey-33c12.16P1 | chr2 | 19507135 | 19507475 | + | N/A | UCSC |
| si:dkey-33c12.16P2 | chr9 | 32191073 | 32191435 | - | N/A | UCSC |
| si:dkey-6n21.12P1 | chr22 | 34314006 | 34314261 | - | N/A | UCSC |
| slc7a6osP1 | chr7 | 27920754 | 27920964 | - | N/A | UCSC |
| sp1P1 | chr6 | 3812792 | 3813049 | + | N/A | UCSC |
| sp1P2 | chr6 | 58669691 | 58669874 | + | N/A | UCSC |
| sp1P3 | chr19 | 2316521 | 2316749 | - | N/A | UCSC |
| stt3aP1 | chr2 | 26286482 | 26286735 | + | ENSDARG00000092267 | UCSC |
| taar18gP1 | chr10 | 40738236 | 40738375 | + | N/A | UCSC |
| tmcc1aP1 | chr22 | 594804 | 594960 | - | N/A | UCSC |
| trim35-22P1 | chr3 | 5353002 | 5353255 | - | N/A | UCSC |
| trim35-22P2 | chr3 | 6186799 | 6187056 | - | N/A | UCSC |
| tuba7lP1 | chr11 | 3338609 | 3340386 | - | N/A | UCSC |
| tuba8lP1 | chr1 | 5418081 | 5418967 | + | N/A | UCSC |
| tuba8lP2 | chr6 | 6973145 | 6974083 | - | N/A | UCSC |
| tuba8lP3 | chr9 | 7662870 | 7663762 | - | N/A | UCSC |
| tuba8lP4 | chr13 | 6247378 | 6248271 | - | N/A | UCSC |
| tuba8lP5 | chr23 | 35690909 | 35691840 | - | N/A | UCSC |
| tubb2bP1 | chr2 | 2010573 | 2011596 | - | N/A | UCSC |
| ufc1P1 | chr13 | 50470864 | 50471363 | + | N/A | UCSC |
| vrk1P1 | chr1 | 16459963 | 16461483 | - | ENSDARG00000091657 | UCSC |
| ywhabaP1 | chr15 | 15350164 | 15350362 | - | N/A | UCSC |
| ywhablP1 | chr5 | 3544488 | 3544697 | + | N/A | UCSC |
| zgc:165539P1 | chr4 | 77127519 | 77129758 | - | N/A | UCSC |
| zgc:165539P2 | chr10 | 19594673 | 19597634 | + | N/A | UCSC |
| zgc:171534P1 | chr4 | 73611983 | 73612158 | + | N/A | UCSC |
| zgc:171534P2 | chr21 | 45920203 | 45920385 | + | N/A | UCSC |
| zgc:92591P1 | chr7 | 5910606 | 5910859 | + | ENSDARG00000105397 | UCSC |
| zgc:92591P2 | chr7 | 73813583 | 73813836 | - | N/A | UCSC |
| zgc:92591P3 | chr25 | 35044870 | 35045123 | - | N/A | UCSC |
| zgc:92591P4 | chr25 | 36321622 | 36321875 | + | N/A | UCSC |
| znf1124P1 | chr4 | 28650652 | 28650914 | - | N/A | UCSC |
| znf1124P10 | chr4 | 57508020 | 57508530 | + | N/A | UCSC |
| znf1124P11 | chr4 | 58764780 | 58766776 | - | N/A | UCSC |
| znf1124P12 | chr4 | 67674634 | 67674846 | - | N/A | UCSC |
| znf1124P2 | chr4 | 31074319 | 31074828 | - | N/A | UCSC |
| znf1124P3 | chr4 | 32956501 | 32956793 | - | N/A | UCSC |
| znf1124P4 | chr4 | 39294353 | 39294507 | - | N/A | UCSC |
| znf1124P5 | chr4 | 45629492 | 45631494 | + | N/A | UCSC |
| znf1124P6 | chr4 | 50881017 | 50881222 | - | N/A | UCSC |
| znf1124P7 | chr4 | 53908066 | 53910048 | - | N/A | UCSC |
| znf1124P8 | chr4 | 56220352 | 56220861 | + | N/A | UCSC |
| znf1124P9 | chr4 | 56736048 | 56736260 | + | N/A | UCSC |