Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nup54
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nucleoporin 54
Also known as 3110079L04Rik|54kDa
Coordinate chr5:92563399-92583109
Strand -
Gene summary Predicted to enable identical protein binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in several processes, including nuclear pore organization; protein localization to nucleus; and regulation of protein import into nucleus. Predicted to act upstream of or within mRNA transport and protein transport. Predicted to be located in nuclear envelope. Predicted to be part of nuclear pore central transport channel. Is expressed in pancreas epithelium. Orthologous to human NUP54 (nucleoporin 54). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nup54

Retroname Coord Strand Genomic Region ENSG
Nup54P1 chr1:129723681-129725705 - Intragenic
ENSMUSG00000089648 UCSC

Expression

Transcript Sequences

>NM_183392.2
GCTTAGACCGGGAAGGAGGCGGAACTAATGGTACGGACCGCCTGACGGTTCCCAGCCGGACAGAAGAGCGGAGGGCACTGGGCGTCGCGCCGCGCGAGCCCGGGGCCATCTAAGTGCTGCTCCCGCGACATGGCTTTCAATTTTGGGGCTCCTTCGGGCACTTCGGGCACCTCTACAGCCACCGCGGCACCGGCGGGTGGGTTTGGAGGATTTGGAACAACAACTACAACTGCAGGCTCTGCCTTCAGCTTTTCAGCCCCAACAAACACAGGCAGTACAGGCCTTCTCGGTGGCACTCAGAACAAAGGTTTTGGCTTTGGTACTGGTTTTGGCACAACGACGGGAACTGGCACTGGTTTAGGCACTGGCTTGGGAACCGGACTTGGATTTGGAGGATTTAatacccagcagcagcagcagcagcagcagacttCTTTAGGTGGTCTCTTCAGTCAGCCGACCCAGGCTCCTGCACAGTCTACCCAGCTCATCAACACTGCCAGCGCACTTTCTGCTCCAACGCTACTGGGGGATGAGAGAGACGCCATCTTGGCAAAGTGGAACCAGTTGCAGGCCTTCTGGGGAACAGGAAAAGGATATTTCAATAATAACATTCCTCCAGTGGAGTTTACCCAGGAGAATCCCTTTTGCCGGTTTAAGGCTGTAGGCTATAGTTGTATGCCCAATAATAAAGATGAAGATGGACtagtagttttaattttcaacaaaaaagaaacagatattAGAAGCCAGCAACAGCAATTGGTAGAATCATTGCATAAAGTTTTGGGAGGAAACCAGACCCTTACGGTCAATGTGGAGGGCATTAAGACGTTGCCGGATGATCAGACGGAAGTTGTCATTTATGTTGTTGAGCGTTCTCCAAATGGCACCTCGAGAAGAGTTCCAGCGACAACACTGTATGCCCACTTTGAGCAAGCCAACATTAAAGCCCAGCTGCAGCAGCTTGGGGTGACCCTTTCTATGACCAGGACAGAGCTGTCTCCCGCTCAGATCAAGCAGCTCTTACAAAACCCTCCCGCAGGTGTTGATCCTATTATTTGGGAACAGGCCAAGGTGGATAACCCAGACTCTGAAAAGTTAATTCCTGTACCAATGGTGGGTTTCAAAGAATTGCTTCGAAGACTGAAGGTTCAAGATCAGATGACTAAGCAGCATCAGACCAGACTAGATATCATATCTGAAGATATTAGTGAACTGCAAAAAAATCAAACTACGACTATGGCCAAAATAGCACAATACAAGAGGAAACTGATGGAGCTCTCCCACAGGACCTTACAGGTCCTAATCAAACAGGAAATCCAGAGGAAGAGTGGCTATGCGATCCAGGCTGATGAAGAGCAGTTGCGGGTTCAGCTAGATACTATTCAAGGGGAACTGAATGCGCCCACTCAGTTCAAAGGTCGGCTGAATGAGCTGATGTCCCAGATCAGGATGCAGAATCATTTTGGAGCCGTGAAATCTGAAGAAAAGTACTACATAGATGCAGACCTGTTACGAGAAATCAAGCAGCATTTGAAACAACAACAGGAAGGCCTTAGCCACTTGATTAGCATCATAAAAGATGACCTAGAAGACATAAAACTGGTAGAACATGGATTGAATGAGACCATCCATAGCAGAGGCGGTGTCTTTAGCTGACCGTTTACAGACTTGTTGCAGAGATTGATAAAATGCGTCTCCTTGCTACATCGAGCCTTCTTCACGATGACCACATGGCCGGGGAAAAGGATGCTTCTCCTCACTGGGATGTCTGCGATCCTCAGAGGTTACTGTACGTTAAATCTGAAATGGTCACCACAAAGCCCTTCAAAGAGAATCTTTGAAAAGTTTATATCTAAAAGCTGTATTTACTTTTAAAGAAGTGTTACCCAAAGCATACACTGTTGTTCATTTTATAACAGCGTTAAGCGTAGTCACGGAGCCTGATGGTTATTCTCCGTTCTCCTCTCCATAGCACAGAGCGCCACAGAGCTACTTCCTACATGACACAACAAACTGGGATTCCATGCCTGTTGGAGGCTGTGCTTCAGGGTATAAATGCATTTCAGCTTTTATATCTGTGAAATCAGCTGTGGAGAGTAAAGAAAATCCCAAAGTATTTAATGATTTGTGtggttttccttttgttctagaaagacttgaaaatatatttttatattattttacttatttagaaCTTACAGAAAATACCTAACCGGTTAGGATATGACAAAATCACCACTTTTgcaagctgttttgttttgttttgtttttttatttctaaaaatgaaatCCTTAAAATAAATTGTTAATTTGTAATTTTATGTAA