Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name GJA1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name gap junction protein alpha 1
Also known as AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA
Coordinate chr6:121435646-121449727
Strand +
Gene summary This gene is a member of the connexin gene family. The encoded protein is a component of gap junctions, which are composed of arrays of intercellular channels that provide a route for the diffusion of low molecular weight materials from cell to cell. The encoded protein is the major protein of gap junctions in the heart that are thought to have a crucial role in the synchronized contraction of the heart and in embryonic development. A related intronless pseudogene has been mapped to chromosome 5. Mutations in this gene have been associated with oculodentodigital dysplasia, autosomal recessive craniometaphyseal dysplasia and heart malformations. [provided by RefSeq, May 2014]

Retrocopy(s) from GJA1

Retroname Coord Strand Genomic Region ENSG
GJA1P1 chr5:109049584-109052656 - Intragenic
ENSG00000176857 UCSC

Expression

Transcript Sequences

>NM_000165.5
AAAAGCTTTTACGAGGTATCAGCACTTTTCTTTCATTAGGGGGAAGGCGTGAGGAAAGTACCAAACAGCAGCGGAGTTTTAAACTTTAAATAGACAGGTCTGAGTGCCTGAACTTGCCTTTTCATTTTACTTCATCCTCCAAGGAGTTCAATCACTTGGCGTGACTTCACTACTTTTAAGCAAAAGAGTGGTGCCCAGGCAACATGGGTGACTGGAGCGCCTTAGGCAAACTCCTTGACAAGGTTCAAGCCTACTCAACTGCTGGAGGGAAGGTGTGGCTGTCAGTACTTTTCATTTTCCGAATCCTGCTGCTGGGGACAGCGGTTGAGTCAGCCTGGGGAGATGAGCAGTCTGCCTTTCGTTGTAACACTCAGCAACCTGGTTGTGAAAATGTCTGCTATGACAAGTCTTTCCCAATCTCTCATGTGCGCTTCTGGGTCCTGCAGATCATATTTGTGTCTGTACCCACACTCTTGTACCTGGCTCATGTGTTCTATGTGATGCGAAAGGAAGAGAAACTGAACAAGAAAGAGGAAGAACTCAAGGTTGCCCAAACTGATGGTGTCAATGTGGACATGCACTTGAAGCAGATTGAGATAAAGAAGTTCAAGTACGGTATTGAAGAGCATGGTAAGGTGAAAATGCGAGGGGGGTTGCTGCGAACCTACATCATCAGTATCCTCTTCAAGTCTATCTTTGAGGTGGCCTTCTTGCTGATCCAGTGGTACATCTATGGATTCAGCTTGAGTGCTGTTTACACTTGCAAAAGAGATCCCTGCCCACATCAGGTGGACTGTTTCCTCTCTCGCCCCACGGAGAAAACCATCTTCATCATCTTCATGCTGGTGGTGTCCTTGGTGTCCCTGGCCTTGAATATCATTGAACTCTTCTATGTTTTCTTCAAGGGCGTTAAGGATCGGGTTAAGGGAAAGAGCGACCCTTACCATGCGACCAGTGGTGCGCTGAGCCCTGCCAAAGACTGTGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTCGCCTATGTCTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCCCATGCACAGCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAGCTGCTGGACATGAATTACAGCCACTAGCCATTGTGGACCAGCGACCTTCAAGCAGAGCCAGCAGTCGTGCCAGCAGCAGACCTCGGCCTGATGACCTGGAGATCTAGATACAGGCTTGAAAGCATCAAGATTCCACTCAATTGTGGAGAAGAAAAAAGGTGCTGTAGAAAGTGCACCAGGTGTTAATTTTGATCCGGTGGAGGTGGTACTCAACAGCCTTATTCATGAGGCTTAGAAAACACAAAGACATTAGAATACCTAGGTTCACTGGGGGTGTATGGGGTAGATGGGTGGAGAGGGAGGGGATAAGAGAGGTGCATGTTGGTATTTAAAGTAGTGGATTCAAAGAACTTAGATTATAAATAAGAGTTCCATTAGGTGATACATAGATAAGGGCTTTTTCTCCCCGCAAACACCCCTAAGAATGGTTCTGTGTATGTGAATGAGCGGGTGGTAATTGTGGCTAAATATTTTTGTTTTACCAAGAAACTGAAATAATTCTGGCCAGGAATAAATACTTCCTGAACATCTTAGGTCTTTTCAACAAGAAAAAGACAGAGGATTGTCCTTAAGTCCCTGCTAAAACATTCCATTGTTAAAATTTGCACTTTGAAGGTAAGCTTTCTAGGCCTGACCCTCCAGGTGTCAATGGACTTGTGCTACTATATTTTTTTATTCTTGGTATCAGTTTAAAATTCAGACAAGGCCCACAGAATAAGATTTTCCATGCATTTGCAAATACGTATATTCTTTTTCCATCCACTTGCACAATATCATTACCATCACTTTTTCATCATTCCTCAGCTACTACTCACATTCATTTAATGGTTTCTGTAAACATTTTTAAGACAGTTGGGATGTCACTTAACATTTTTTTTTTGAGCTAAAGTCAGGGAATCAAGCCATGCTTAATATTTAACAATCACTTATATGTGTGTCGAAGAGTTTGTTTTGTTTGTCATGTATTGGTACAAGCAGATACAGTATAAACTCACAAACACAGATTTGAAAATAATGCACATATGGTGTTCAAATTTGAACCTTTCTCATGGATTTTTGTGGTGTGGGCCAATATGGTGTTTACATTATATAATTCCTGCTGTGGCAAGTAAAGCACACTTTTTTTTTCTCCTAAAATGTTTTTCCCTGTGTATCCTATTATGGATACTGGTTTTGTTAATTATGATTCTTTATTTTCTCTCCTTTTTTTAGGATATAGCAGTAATGCTATTACTGAAATGAATTTCCTTTTTCTGAAATGTAATCATTGATGCTTGAATGATAGAATTTTAGTACTGTAAACAGGCTTTAGTCATTAATGTGAGAGACTTAGAAAAAATGCTTAGAGTGGACTATTAAATGTGCCTAAATGAATTTTGCAGTAACTGGTATTCTTGGGTTTTCCTACTTAATACACAGTAATTCAGAACTTGTATTCTATTATGAGTTTAGCAGTCTTTTGGAGTGACCAGCAACTTTGATGTTTGCACTAAGATTTTATTTGGAATGCAAGAGAGGTTGAAAGAGGATTCAGTAGTACACATACAACTAATTTATTTGAACTATATGTTGAAGACATCTACCAGTTTCTCCAAATGCCTTTTTTAAAACTCATCACAGAAGATTGGTGAAAATGCTGAGTATGACACTTTTCTTCTTGCATGCATGTCAGCTACATAAACAGTTTTGTACAATGAAAATTACTAATTTGTTTGACATTCCATGTTAAACTACGGTCATGTTCAGCTTCATTGCATGTAATGTAGACCTAGTCCATCAGATCATGTGTTCTGGAGAGTGTTCTTTATTCAATAAAGTTTTAATTTAGTATAAACATA