Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Actc1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name actin, alpha, cardiac muscle 1
Also known as -
Coordinate chr3:105507403-105512939
Strand -
Gene summary Predicted to enable ATP binding activity; microfilament motor activity; and myosin binding activity. Involved in cardiac muscle contraction; response to ethanol; and response to xenobiotic stimulus. Predicted to be located in several cellular components, including I band; filopodium; and lamellipodium. Predicted to be part of dynactin complex. Predicted to be active in actin filament; glutamatergic synapse; and sarcomere. Biomarker of hypertension. Human ortholog(s) of this gene implicated in atrial heart septal defect 5; dilated cardiomyopathy; dilated cardiomyopathy 1R; and hypertrophic cardiomyopathy 11. Orthologous to human ACTC1 (actin alpha cardiac muscle 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Actc1

Retroname Coord Strand Genomic Region ENSG
Actc1P1 chr4:35593274-35594607 - Intergenic
 N/A UCSC
Actc1P2 chr10:109519676-109520632 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_019183.1
GACCAAATAAGGCAAGGTGGCAGCTCAGGGGCCCTCCACCCCTGCCCCCGGCTGCTCCAACTGACCCCGTCCATCAGCGCGCTATAAAGCCGCGCTCCAGGCGACTGTCACCTAGTGCCTGCCACCAGCGCCAGCCCAGCTGAACCCAGCCGCCCAAAGCACGCCTACAGATCCCACAGAAGCTGTACCAGGATGTGTGACGACGAGGAGACCACAGCTTTGGTGTGCGACAATGGCTCCGGACTGGTGAAGGCTGGCTTTGCGGGTGATGATGCTCCCAGAGCTGTCTTCCCATCCATCGTGGGTCGCCCACGCCACCAGGGTGTCATGGTAGGTATGGGGCAGAAAGACTCCTATGTAGGTGACGAGGCTCAGAGCAAGCGAGGCATCCTGACTCTGAAGTACCCCATAGAGCACGGCATTATCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTCCGTGTGGCCCCTGAGGAGCACCCGACCCTGCTCACTGAGGCCCCACTGAACCCCAAGGCCAACCGTGAGAAGATGACACAGATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCGGTGCTGTCCCTGTACGCTTCTGGGAGAACCACAGGCATTGTTCTGGATTCTGGCGACGGTGTGACTCATAACGTCCCCATCTATGAGGGTTATGCCTTACCCCATGCCATCATGCGTCTGGATCTAGCTGGTCGGGACCTCACTGACTACCTTATGAAGATCCTCACTGAGCGCGGGTACTCCTTTGTCACCACCGCTGAACGTGAAATTGTCCGAGACATCAAAGAAAAACTGTGTTATGTCGCCCTGGATTTTGAGAATGAGATGGCCACCGCTGCATCTTCCTCCTCTCTGGAGAAGAGCTACGAACTTCCCGATGGCCAGGTCATCACCATTGGCAACGAGCGTTTCCGCTGTCCTGAGACTCTCTTCCAGCCCTCTTTCATTGGTATGGAGTCTGCCGGCATTCACGAAACTACTTATAACAGCATCATGAAGTGTGACATCGATATCCGCAAAGACCTGTACGCCAACAATGTCCTGTCTGGAGGCACCACCATGTACCCTGGGATTGCTGATCGTATGCAAAAGGAAATAACTGCACTGGCTCCCAGCACCATGAAGATTAAGATTATTGCTCCCCCTGAGCGTAAATACTCTGTCTGGATTGGGGGCTCCATCCTGGCCTCTCTGTCTACCTTCCAACAAATGTGGATCAGCAAGCAAGAGTACGATGAGGCCGGGCCCTCCATTGTCCACCGCAAGTGCTTCTGAGGCGGCTACCTTACACTCAGGATGACAGTATTGTGCTTGGAATCCTCTGAGGCCCTCTCCCATCTCCCATCAGTCATTGTACAGTTTGTTTACACACGTGCAGTTTGTTTGTGCTTCAAATATTTATTGCTTTATAAATAAACCAGACCAGGACTTGCAACCT