Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gpx2
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name glutathione peroxidase 2
Also known as GPX-GI|GSHPx-2|GSHPx-GI
Coordinate chr6:99839960-99843245
Strand -
Gene summary The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyze the reduction of organic hydroperoxides and hydrogen peroxide (H2O2) by glutathione, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. This isozyme is predominantly expressed in the gastrointestinal tract in rodents, is localized in the cytoplasm, and whose preferred substrate is hydrogen peroxide. Knockout studies in mice lacking this gene suggest a role for this isozyme in intestinal inflammation and colon cancer development. This isozyme is also a selenoprotein, containing the rare amino acid selenocysteine (Sec) at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Pseudogenes of this locus have been identified on chromosomes 2 and X. [provided by RefSeq, Aug 2017]

Retrocopy(s) from Gpx2

Retroname Coord Strand Genomic Region ENSG
Gpx2P1 chr2:116263775-116264636 - Intragenic
N/A UCSC
Gpx2P2 chrX:63824317-63824759 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_183403.2
GGGAATGCTCAAAGGCCCTTTGTGAAATTCTTTCTGTCCTTCCTGGCTCCTCCTTCCTCCCCACCCAGTCAAGGAACTTAAGGAGGCTCCCACAGCCGGGCAGGACTCACAGCACTCCAGCATGGCTTACATCGCCAAGTCTTTTTACGATCTCAGTGCCATCGGCCTGGATGGGGAGAAGATAGACTTCAACACGTTCCGAGGCAGGGCCGTGCTGATTGAGAATGTGGCCTCGCTCTGAGGAACAACTACCCGGGACTACACCCAGCTCAATGAGTTGCAGTGCCGCTTTCCCAGGCGCCTAGTGGTTCTCGGCTTCCCTTGCAACCAGTTCGGACATCAGGAGAACTGTCAGAATGAGGAGATCCTGAACAGCCTCAAGTATGTCCGCCCTGGGGGTGGGTTCCAGCCCACCTTCAGTCTTACCCAAAAGTGTGATGTCAATGGGCAGAATCAGCATCCTGTCTTTGCCTACCTGAAAGACAAGCTGCCCTACCCTTATGACGACCCATTCTCCCTCATGACCGATCCCAAGCTCATCATATGGAGTCCGGTGCGCCGCTCAGATGTGTCCTGGAACTTTGAGAAGTTCCTCATAGGGCCAGAAGGGGAGCCTTTCCGTCGCTACAGCCGCACCTTCCAGACCATCAACATCGAGCCTGACATCAAACGTCTCCTCAAAGTTGCCATCTAAATGAGGGCTGCTCAGCCTAGGAATCTCCGACTGTTTCTCCAAGTAGTCCTCTTCAGAGCTCAGTGTACCctcaggagacactgggaaaccgaagcatttcctcaatattgtccccttgccttcctgccacccatttcCTTTAGCTCCCTAAAGGCTCTTGGGGAGTCCACTGGGGGCTCTAAGTCTGGGGTAGGTGCTAGGCCTTCTTCACAGAATGATGGCATCTTCCTAAACCCTTCTGGGGGATGTCTGAGACGTTGTGAAGGGCCCAGAGCCAGCTCGGTTTAGAGTCCAATAAAGGGTAGGAATGACCTGG