Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Acta1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name actin, alpha 1, skeletal muscle
Also known as -
Coordinate chr19:56674072-56677084
Strand -
Gene summary Predicted to enable ATP binding activity. Involved in several processes, including response to lithium ion; response to steroid hormone; and skeletal muscle fiber adaptation. Predicted to be located in several cellular components, including filopodium; lamellipodium; and sarcomere. Predicted to be part of dynactin complex. Predicted to be active in actin filament; stress fiber; and striated muscle thin filament. Human ortholog(s) of this gene implicated in congenital fiber-type disproportion and nemaline myopathy 3. Orthologous to human ACTA1 (actin alpha 1, skeletal muscle). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Acta1

Retroname Coord Strand Genomic Region ENSG
Acta1P1 chr2:42829605-42830633 + Intergenic
N/A UCSC
Acta1P2 chr12:13717067-13718210 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_019212.2
TGAAGCCTCACTTCCTACCCTCGGCACCCAGGGCCAGAGTCAGAGCAGCAGAAACTAGACACCATGTGTGACGAGGACGAGACCACCGCTCTTGTGTGTGACAACGGCTCTGGCCTGGTGAAAGCTGGCTTTGCCGGGGATGATGCCCCCAGGGCTGTGTTCCCATCCATCGTGGGTCGGCCCCGTCACCAGGGTGTCATGGTCGGTATGGGTCAGAAGGATTCCTACGTGGGCGACGAGGCCCAGAGCAAGCGAGGTATCCTGACCCTGAAGTACCCCATTGAACACGGCATTATCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCCCCCGAGGAGCACCCGACCCTGCTCACTGAGGCCCCTTTGAACCCCAAAGCTAACCGGGAGAAGATGACTCAAATCATGTTTGAGACCTTCAACGTGCCTGCTATGTATGTGGCTATTCAGGCGGTGCTGTCTCTCTATGCCTCCGGCCGTACCACCGGCATCGTGTTGGATTCTGGGGACGGTGTCACCCACAACGTGCCCATCTATGAGGGTTATGCCCTGCCACACGCCATCATGCGTCTGGACCTGGCTGGTCGCGACCTTACTGACTACCTGATGAAAATCCTCACCGAGCGTGGCTATTCCTTCGTGACCACAGCTGAACGTGAGATTGTGCGCGACATCAAAGAGAAGCTGTGCTACGTGGCCCTGGACTTCGAGAATGAGATGGCCACCGCTGCCTCTTCCTCCTCCCTGGAAAAGAGCTATGAGCTGCCTGACGGGCAGGTCATCACCATCGGCAATGAGCGCTTCCGTTGCCCGGAGACGCTCTTCCAGCCTTCCTTTATCGGTATGGAGTCTGCGGGGATCCATGAGACCACCTACAACAGCATCATGAAGTGCGACATCGACATCAGGAAGGACCTGTACGCCAACAACGTCATGTCAGGGGGCACTACCATGTACCCCGGTATCGCTGACCGCATGCAGAAGGAGATCACAGCTCTGGCTCCCAGCACCATGAAGATCAAGATCATCGCCCCCCCTGAGCGCAAGTACTCAGTGTGGATCGGCGGCTCCATCCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCACCAAGCAGGAGTACGACGAGGCCGGCCCCTCCATTGTGCACCGCAAATGCTTCTAGGCGCACCCGCGTCTGTGTACGCGCTCTCTCTCCTCAGGACGACAATCGACCATCGTGCTATGGTTGCAGGGTGGCCCCATCCTCCGCCGTGGCTCCATCGCCGCCACTGCAGCCGGCGCCTGTTTTTGACGTGTACATAGATTCACTCGTTTTACCTCATTTTGTTATTTTTCAAACAAAGCCCTGTGGAAGGAAATGGAAAACTTGAAGCATTAAAGCCAGCCATTCTGTTTTGCTCCAA