Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CNOT7
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name CCR4-NOT transcription complex subunit 7
Also known as CAF-1|CAF1|Caf1a|hCAF-1
Coordinate chr8:17221981-17246857
Strand -
Gene summary The protein encoded by this gene binds to an anti-proliferative protein, B-cell translocation protein 1, which negatively regulates cell proliferation. Binding of the two proteins, which is driven by phosphorylation of the anti-proliferative protein, causes signaling events in cell division that lead to changes in cell proliferation associated with cell-cell contact. The encoded protein downregulates the innate immune response and therefore provides a therapeutic target for enhancing its antimicrobial activity against foreign agents. Alternative splicing of this gene results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 1 and X. [provided by RefSeq, Apr 2016]

Retrocopy(s) from CNOT7

Retroname Coord Strand Genomic Region ENSG
CNOT7P2 chr1:115564404-115566937 + Intergenic
ENSG00000232185 UCSC
CNOT7P1 chrX:69935471-69938187 - Intragenic
ENSG00000233229 UCSC

Expression

Transcript Sequences

>NM_013354.7
GTGCGAAAAGCGACGGCGCAGCACGGTGCGGCGCAGCTCCTGCTCGCCTTTCCCTTCGCTGGGCGAGAGGTGTCTATGGGGCACCCGCTGccgccgccgctaccgccaccgccaccgccaccgccGCCGAGTGCTGTCTCTATGGCgaggaggaggaggaggagCGCGAGCTCAGCGACACAAGTACATAAATAAAGGATAAAATATTTTATGAAACAAATCTTCAATCAAGTATAACATTTTGATGCTTGGCATCTAGACTCCCTTGTGCCCTCACTATGCCAGCGGCAACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACTTGGATGAAGAGATGAAGAAAATTCGTCAAGTTATCCGAAAATATAATTACGTTGCTATGGACACCGAGTTTCCAGGTGTGGTTGCAAGACCCATTGGAGAATTCAGGAGCAATGCTGACTATCAATACCAACTATTGCGGTGTAATGTAGACTTGTTAAAGATAATTCAGCTAGGACTGACATTTATGAATGAGCAAGGAGAATACCCTCCAGGAACTTCAACTTGGCAGTTTAATTTTAAATTTAATTTGACGGAGGACATGTATGCCCAGGACTCTATAGAGCTACTAACAACATCTGGTATCCAGTTTAAAAAACATGAGGAGGAAGGAATTGAAACCCAGTACTTTGCAGAACTTCTTATGACTTCTGGAGTGGTCCTCTGTGAAGGGGTCAAATGGTTGTCATTTCATAGCGGTTACGACTTTGGCTACTTAATCAAAATCCTAACCAACTCTAACTTGCCTGAAGAAGAACTTGACTTCTTTGAGATCCTTCGATTGTTTTTTCCTGTCATTTATGATGTGAAGTACCTCATGAAGAGCTGCAAAAATCTCAAAGGTGGATTACAGGAGGTGGCAGAACAGTTAGAGCTGGAACGGATAGGACCACAACATCAGGCAGGATCTGATTCATTGCTCACAGGAATGGCCTTTTTCAAAATGAGAGAAATGTTCTTTGAAGATCATATTGATGATGCCAAATATTGTGGTCATTTGTATGGCCTTGGTTCTGGTTCATCCTATGTACAGAATGGCACAGGGAATGCATATGAAGAGGAAGCCAACAAGCAGTCATGACATGAAATAGTCCTTTTATTTTTATTTCGAGCTACACACATGCTTGTATATAGGTTTTATCTCTGGTTGAATCCCTCGAACAATAGACAGTACCTTTCCCCCCCCTTTCATGGCCCATTTTATTGTCTGCCTTTCAGTACTAAGTATGACCGTTCCTATCTCAGATCTTAATAAAAAGAAAAAAAAAAACGCATTCAGGTTAAATTTGGCCTTAATTTAATATACTTGTTAGCAAGCGTGTGTGACAGAGAGTGGGGAAAGCTACATCATTGAATATTTTGATAAACTTTACCGACTTGAGTTTGGTTTATTTTTCCCTTTTCCTAAATTAACTAGCACTGACTGTAATTTATTTCCCTGTTTCACGTCTCTCCCTTCCATTCTGCAGGAGTTTTAGCTATTTGAGATCGTGGACCATCAGTTTTGCACTTTAGAGAGTGTTTCTGACTCTAAACCTGTTTTATCAGAAAATTTGTTTTTTCTTGATCTTAGCTGGAAAAATCTGCCAACTTTACACAGTATTTACTTGGTTTTGACCCACAGAATATAGCACGTTGTGCAAACTGTCGATTCAGCGAAACTTAAAAAAGACAAGAAACTACTGAGGAGCTTAGTAACTGCTGTTTCTGTACGTAGTGTTTAATCTTCCAAGCACATCTAGTGTCTGTCAGTTTCTAATTGGCATGTGTAGGCTGCTCTGTGACTGAAGAATTTTCAAACCAGCTTTACACCCTTCAGGAAAAATCCCTTGTGATTGGATGTTTACTATCTGCCAGGAAACTGGTACTCAAGATGTTGAAGCTACAGTTATTTTATGATAGCACACTTCCCTTGATCTGCTTATTTTTATTCCATCACCATTTACCCTTTTTTTTTTTTTAAATTTTGTAGCCATTCTTATGATGCTCTTGATTTGTTGGTTACACAAATCAATTTTATTAAAAATCCAAAGATAAGTCTTTAGGTATATTTTGTACCAAATTAAATTAGAAGACAAAAATTGTGCTTTCATAGTTGCTACAAAGGTAAATAATGGAGAGATTTGGTACAAAACAACAAAatatatatatattctcatatatatatatataGCTGATAAAATTACCTGAGGAGTGTAATGCTTATTTTTTTGTGTATATCTTTGCAATCTATTTTATATATATTGACAAAAGAGACTGTGAAATACTTAGCCATGCAGAATATGTGACCAGACCAGAGCATGTGTAGGAAGACTTTACGGTAATCATTAACTCTACCCCGAAATGATGGACTACAAGTTATAATGTGTGTTACCTACACTTCAATCAGTAATATTAGCAAATCTCCAAATGTTAGTCACATTGGTTTGTCTCCCTTGTACATTCTTTATTCATGATATTACAGTGCTGTAACTGGGTGGTCCTTTTTAAACAAAACATTATTTGCAAAACAGAGGGTATTATTTGTTTTTAAAGCTTTTGTAAATAAAGGCTTCAAAATGTTTTCTTATAAATGTTGATGACTGGTGATTTTCTTTTGGAAATACTTATTTGGGGGATATTGTTCATTTTTATTTGGGCAACTCAACAGAATTCAGTAACTTCCTTCATTAACCCTAGATGATTATTAGTCCATTAATTGAAAAATCAGTCTGAGTTTTCTGCATTTCAAGTGTTGGCTTATTCTTGTTCTTTATGAGTACCTCAACTAGCTAATTAAGGACTGACTTCTGTTTCTCCTTTCCAGGAATGCATTTATTCCGAAGGATATACTTCACAAAGTAAATACATTTGGTATAACTGTGGCTTTTTAAAAAATCTAACACAATGTAGTAAGTTTCTAACTGGCTTCTTTTGTCTTCGTTAAAAAGGAAGTGAAGCTTCTTTTCGCTTGTGATTTGTTAGCTGAGAAAACTAATATTTAAATTCTGTTCAACTATTTGAGAAATCAATGCTGGATTTCAAATAGGAATGATAAAGATTGCCTTTTTATTAGCCACATAGTTGCTCAATCTCATAACTTGTATCATTTCTGGCTTCTGTCCCTAAAAAGTATagataatccctaacttactttcgacttaatgatttttcaactttacagtgggtgtattgagaggtaaccccatcaaaagtttaggagcgcctTAGGACCAAAGATGGGGTtatagtttctactgaatgtgtattgcttttgcaccattgcaaagtcaaaatttataacttgaaccatcgtaaattgggggactgtatgCTGTTGCCTGCATTAAATGCATCTTAGTATTTTTTCAGATGTAACCTCATTGTAGGTTGAGCAACCGTATAGTGTAACTTTTGTAGAGGAACATTTTGACTTTTACTGGGTCTAAGTTTTACTTTTTTATTTTGTTCCAGACAGTCTCAATGTTTGTAAAGTCTAGGTTCCAGATGTAAGATATTTGGCTGATATTTTAGTGTTACTGAGCCATTAATTAATTACAGGCTCATATATTCTGTTAAATCTACTAGAGcaagggttgtcaaactatggcccgtagccagaatcagcttgctgcctgtttttgtgtggcccatgaactgaaaatggcttttaaatggttgggaaaaataatcaaaagattatttcctgacatctgaaaattacatgaaattcaaattttagtgtctataagtttttattggaatgcagccacactaatttacatattatctatggatacttttttgctataatgggaaagttgagtagctgctacagaacctgtgtatgtgtgtcttgtttcacattgccgcttggcaagctacagaatcatggtgatgcagatattacctgaaagcatttggaatgccctgtgtattgctagatttattactttttctgctaccagttcatgccctgtatctcagaacaagaaaagtacctttgaatgttacactttcaaggcacattggaatatggactattttattatatgctggtacattgtgtttataatgcagtgtcaccataactggtaaaagaatagactgacagtatcagactaacatcacaatattcccaactggtgggaaagcaacagtcagaagaattagaaaatttaaatgaaacatcacagcaaaatttcacaaaagtaataaaaatgaggctgcaaccaaaatgtttacaagtagcctatttgttagccaagcaaagaaaaccatttactaatgctgaattacatcgtgcttgaagatagtaaccaacccaaagacatgtgtccagagaaaattaagacatcagccctttgatgagaacagtagtttgaagaatgaggattttggacacaacatcaaATGACACTGTTAATTCTTTGCCTCTTACTAGTCAGtactgcctagctttattttttgagaaaccattgctggatttgaagtgatcgaagaatttgtatggaactacaagtgggaatattttcaaaaaagttgataaacagtacaacctgaagtggaatctactaagatgtgatgcaaccgatgctgggaaaaatgcatgaagcagaaaaaaagtttatttggtcaaattttaaggcttgtgaaaacgtaagttgtttaaagcctgtagttactcacttgattattcatcagcaggtacttcacaggaaatattggtgttactgaactggtcaacagttaacttcatttgctcttgtggacttaaccatcttcagttccatgatttttttttttttgtgagaaacagaagctgaatatcctgatttgatttgccacacaggcgttcaatggcttagcagtgctaaagatttatttttatttttttgggctctgggctgacattgaaatttttctgaatgagaaaaaccatcctcaaccactgttttttaacactgagtaactttggaaattaacttttgccacagacttgaaaatgtttcttaatgaatttgacctgaaattacaaggtacaacaacataatatggtaaattcatttcaataaaaactaaaacttaagattgtcaagctgctttatatactttctgtgctatgagaagtcaaaacagcgctgtattgccaaatccatttttagtggatatattttcctgtagcagttttttggaccttgatgcagtgcaaagaaaatttttaaattttaaaagcatttaactgcaattaaatgcttttaaagtttcctcttaatcttctgttggaaatgaatcatcttgaatgaatgacatgctaaagggcaaataccaaaaagatgaatcctacaaatgccttacaagtgatgaatatgcttaactaaaatcacatgctcatgggtggatgtgtcagtatttagcagtaccttgacctgtttgtgtgaaaagacattttcaaagatgaaatacgtgaaatcccattacacatcagcattaacagattaacattttctatttattccaatgaggggataccaactttcagcccaaattgagcaaaatgttacctcccgtcccctgccaaaaaatcccattattcccattagtagaactctattactaaaaaaagaaaaaaaaattgtactcaatattttgagttttcaatttttagaataaaaatttggtgaaaagtttccttgagtacctaaataatgtccttcattttgtcttagcttgcaaagcctctaatatttgctacctgcccttttCaaaaaaaaaaaaaaaaaaaaaaaaaaGGCTTGTCCACCTCTCTACTAGAAGAAACTCAAGGGTCTATGTCTGTCCTGTTTGCTATTTCATCTGCATTGCCAAATGCAGTGGCTCCTCTGGGTAGGCAACCTGAGGTGGAATCAAATTATGAATGCATATGTTATCTCATGTCTATAAAATAAATGTGTTAGAATTTATAAATAAAGGGATAGGAAAAATGCTGATTATTCTGTGTGTCGGTGCTTTGTAGTGAAGGCCAGTTCACACATGCCATTTGCTATGTTGGTGTAATTTATATGAGAGTTTCTTTTATAACAACGTTACCTGTCATTTATTTTTCTATTAAGACATTATAGAAACGTAGGACTGTACACATCCAAATCCTGCAGAATTTTCATTTCAGGTTTTGAAAGTTAAAAAAATGTCACCATAGAATGAAAATTCCAAGAAAACAAGATTCATGTACATTATCACTAGACAATTTCCATTTGTTTTAAACAGTTTTCTACAGCATTAGTTACATTTAACGTTTAGTATAAAAGCAATTGAGCAATTTCTCTTTAGAAGTCCATTTCATTGCTTTGTAGCCATAGTCTGTAGGTGAATGAACAAGCTACATTTCTCCAGAATTACTCATTTTCTTTTTAAAGATAAACTGGTCAATACTCTCCTTCCTGGTATGGAGGAATTTTTTGTATATGAGAAGCATTCATGAATATAATCTGCCCTCTTGCTTTATTGTCATAGGAGGGGAAATTCACTGCTTTCACACCCTTCTGTTTTGGCTCTTTCTCCCAAAAGATAAGAATCTTTATTTAGTATCATACCAAGAAATTGGAGTTCCTTTAGCTTCAGACTATCATCATGGCTTCCAAATTGTTAGGAAATACAAGTTTGCAAGACCCCAAGGGGACTTAATATTTTACATCTTACTAGCCATGTCATAGGTTTTAAGTGCTTTTAATGGGGAACTGTTTCACTCATGCCATATACCTGTTTTGTTTTTCTAAAAAATTAATACTGTAAGTTGTGAGCAGGTGTCTTGTATCACTGCGAAACCCATGCATAATAAAAACTTGTTCTTGAGCTA