Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGN2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name high mobility group nucleosomal binding domain 2
Also known as HMG17
Coordinate chr1:26472440-26476642
Strand +
Gene summary The protein encoded by this gene binds nucleosomal DNA and is associated with transcriptionally active chromatin. Along with a similar protein, HMGN1, the encoded protein may help maintain an open chromatin configuration around transcribable genes. The protein has also been found to have antimicrobial activity against bacteria, viruses and fungi. [provided by RefSeq, Oct 2014]

Retrocopy(s) from HMGN2

Retroname Coord Strand Genomic Region ENSG
HMGN2P58 chr10:70174865-70175069 - Intergenic
N/A UCSC
HMGN2P34 chr10:72636481-72636771 - Intergenic
ENSG00000231471 UCSC
HMGN2P8 chr10:84081415-84082811 + Intergenic
ENSG00000212769 UCSC
HMGN2P35 chr10:96914538-96916002 - Intragenic
ENSG00000232875 UCSC
HMGN2P36 chr11:13609601-13610672 - Intergenic
ENSG00000228901 UCSC
HMGN2P59 chr11:45514088-45515264 + Intergenic
ENSG00000255519 UCSC
HMGN2P18 chr1:155148538-155150278 + Intergenic
ENSG00000223452 UCSC
HMGN2P38 chr11:73580151-73581334 + Intragenic
ENSG00000231726 UCSC
HMGN2P49 chr1:184824409-184824931 + Intragenic
N/A UCSC
HMGN2P19 chr1:229570428-229571625 + Intergenic
ENSG00000229367 UCSC
HMGN2P39 chr13:59010325-59011792 + Intergenic
ENSG00000214281 UCSC
HMGN2P6 chr14:25266259-25267446 - Intergenic
ENSG00000257179 UCSC
HMGN2P60 chr14:60971454-60972573 - Intergenic
ENSG00000258656 UCSC
HMGN2P2 chr14:80822428-80823606 + Intragenic
ENSG00000258452 UCSC
HMGN2P5 chr15:29730611-29731806 + Intragenic
ENSG00000234664 UCSC
HMGN2P61 chr15:45318100-45321392 - Intergenic
ENSG00000235390 UCSC
HMGN2P47 chr15:67000001-67001197 - Intergenic
ENSG00000259246 UCSC
HMGN2P40 chr15:68254595-68255717 + Intergenic
ENSG00000260602 UCSC
HMGN2P62 chr15:75415870-75417051 + Intragenic
ENSG00000261714 UCSC
HMGN2P63 chr15:76472096-76473376 + Intragenic
ENSG00000261232 UCSC
HMGN2P64 chr15:77278460-77279844 + Intragenic
ENSG00000230459 UCSC
HMGN2P3 chr16:26031716-26032918 - Intragenic
ENSG00000230330 UCSC
HMGN2P41 chr16:35802089-35803274 - Intergenic
ENSG00000261620 UCSC
HMGN2P15 chr17:42752734-42753906 - Intergenic
ENSG00000214578 UCSC
HMGN2P69 chr17:60434355-60435536 - Intergenic
N/A UCSC
HMGN2P65 chr17:63003907-63004968 - Intragenic
ENSG00000272164 UCSC
HMGN2P66 chr17:76345831-76346041 + Intragenic
ENSG00000267518 UCSC
HMGN2P67 chr18:32032544-32034339 - Intragenic
N/A UCSC
HMGN2P17 chr1:8893410-8894603 + Intergenic
ENSG00000238249 UCSC
HMGN2P22 chr2:100589925-100591426 - Intergenic
ENSG00000227259 UCSC
HMGN2P23 chr2:112980349-112981538 - Intragenic
ENSG00000236124 UCSC
HMGN2P10 chr22:41708416-41709585 - Intragenic
ENSG00000231261 UCSC
HMGN2P20 chr2:24330396-24331936 + Intragenic
ENSG00000232963 UCSC
HMGN2P9 chr22:43802542-43803541 + Intragenic
ENSG00000180150 UCSC
HMGN2P21 chr2:70803058-70804245 + Intergenic
ENSG00000228034 UCSC
HMGN2P25 chr3:141864287-141865368 - Intergenic
ENSG00000228398 UCSC
HMGN2P13 chr3:153067179-153068361 + Intergenic
ENSG00000241810 UCSC
HMGN2P7 chr3:15374252-15375758 - Intergenic
ENSG00000226427 UCSC
HMGN2P26 chr3:167958852-167959860 + Intergenic
ENSG00000241203 UCSC
HMGN2P24 chr3:40698248-40699342 - Intergenic
ENSG00000229072 UCSC
HMGN2P50 chr4:15766879-15768483 + Intragenic
Intragenic
N/A UCSC
HMGN2P27 chr5:116217204-116218402 - Intragenic
ENSG00000232916 UCSC
HMGN2P51 chr5:73410067-73411243 + Intergenic
ENSG00000249149 UCSC
HMGN2P4 chr5:76241200-76242402 - Intragenic
ENSG00000249014 UCSC
HMGN2P54 chr6:106930968-106932087 - Intergenic
N/A UCSC
HMGN2P55 chr6:121408410-121409925 + Intergenic
N/A UCSC
HMGN2P28 chr6:2341443-2342500 + Intergenic
ENSG00000236086 UCSC
HMGN2P52 chr6:26545203-26545572 + Intergenic
N/A UCSC
HMGN2P53 chr6:79353637-79354721 - Intergenic
ENSG00000218029 UCSC
HMGN2P56 chr7:121956261-121957329 - Intragenic
N/A UCSC
HMGN2P30 chr7:42113257-42114439 + Intragenic
ENSG00000213721 UCSC
HMGN2P11 chr7:84876693-84877729 + Intergenic
ENSG00000232605 UCSC
HMGN2P32 chr9:107456082-107458311 - Intergenic
ENSG00000213558 UCSC
HMGN2P16 chr9:15588404-15589631 + Intragenic
ENSG00000231376 UCSC
HMGN2P31 chr9:5311438-5312723 + Intragenic
ENSG00000214195 UCSC
HMGN2P57 chr9:84078578-84080006 + Intergenic
ENSG00000270166 UCSC
HMGN2P48 chrX:153051341-153052421 - Intergenic
ENSG00000229979 UCSC
HMGN2P68 chrX:17131921-17133398 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_005517.4
GAAATCCGGTTCTAACCGGTCCGGGGCTCCCAGCGCTATAAAAACTTTATAAACCCCCCGGAGCCCGAGCAGTGTGAAGAAGAGGCGAGAACGACCCCCGGACCGACCAAAGCCCGCGCGCCGCTGCATCCCGCGTCCAGCACCTACGTCCCGCTGCCGTCGCCGCCGCCACCATGCCCAAGAGAAAGGCTGAAGGGGATGCTAAGGGAGATAAAGCAAAGGTGAAGGACGAACCACAGAGAAGATCCGCGAGGTTGTCTGCTAAACCTGCTCCTCCAAAGCCAGAGCCCAAGCCTAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGGTACCCAAAGGGAAAAAGGGAAAAGCTGATGCTGGCAAGGAGGGGAATAACCCTGCAGAAAATGGAGATGCCAAAACAGACCAGGCACAGAAAGCTGAAGGTGCTGGAGATGCCAAGTGAAGTGTGTGCATTTTTGATAACTGTGTACTTCTGGTGACTGTACAGTTTGAAATACTATTTTTTATCAAGTTTTATAAAAATGCAGAAttttgttttactttttttttttttttAAAAGCTATGTTGTTAGCACACAGAACACTTCATTGTTGTTTTTGGGGGAAGGGGCATATGTCACTAATAGAATGTCTCCAAAGCTGGATTGATGTGGAGAAAACACCTTTCCCTTCTAGTTTTGAGAGACTTCCTCTTGGCTCCCAGGAGGAGGGATTCCCTGACTTTGACACACATGGCCACCTTGGCACAAAAGCCTTGTGGTATAGAAAAACAAATTTGTTTTTATGTCCTCTTCTCCCTTTCCATCGTTCAGCATAGACTTAACTCCCTTAAGCCCAGACATCTGTTGAGACCTGACCCCTAGTCATTGGTTACCAGTGTGTCAGGCAATCTGGACTTTCCAGTGATGCCACTGAGATGGCACCTGTCAAAAGAGCAGTGGTTCCATTTCTAGATTGTGGATCTTCAGATAAATTCTGCCATTTTCATTTCACTTCCTGAAAGTCAGGGTCGGCTTGTGAAAAGTTGTTAAACAACATGCTAAATGTGAAATGTCAACCCTCACTCTAAACTTTCCCTGTTCAGAGCATCAGATGAAGACTTCATTGGGTTTTATAGTGGCTTTCTGATTTTTGGTAGTCCATTGAAGAAGGGAGTTTGAAAGTTGTTGTATACTGTTAACGATTGTCTGCCCATGTCCTGCCTGAAATACCATGATTGTTTATGGAAAGTATCTTTAATAAAGCTGGATACAGTTTGGCTTGGAATGCTGCCTCTGATCTTTTCCCACAAGTGGGGTAACCTGGTTTATCCAAGTCTCTTGGAACAGGGTACGTTCTGCTTTGAGGTACTCCATGTACAGTCTAATGATGATCTTTCACTGATTTATAGTCAGCTTCCAAAACACACAGTGCTAGGTGCAGTTAGGAAGGATTCCAGGAGTAGACTTAGCTGATGGTGAAAGGCTGGGAGTATGGAGTGATTTCTGTACTTGGTTATGCAGCATTCCCTGCAGTGTTTGTTTTTTGCATGACTCCGAATACATGAAGTGTATTAAATGCAGATTTTTGGTAGATCTGCGGTTTTGGCTGGGTAGCTGACAGGAGCCTCTCTACTTCCATCTGCATTTGCAACTTCTATAAAATTAGCAAATTAATAGACTCATGTCAGAGAGTGTCTCTGTGAATGTGTACACAGTTGTCCATTTGTAAGGTAGATGACACTTTGCTCCTAAGTAGACCTGCAAACAAAGACAATGGGGTCTTTCCTGATTCCTTTAGTTTGGAGATGCAGAGAACCCCACGTTTCTCTAAGTGAAATGGCAAGAAGTTATTTGTTAGAATATGGAACTGGTAACAAATTCATGTTTGCACCTTGAATTTGCTTTCACAGACCTGGCTGTATTGTTGGACAGGAATAAAGTAAATTGGAGACTAA