Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HSBP1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name heat shock factor binding protein 1
Also known as NPC-A-13
Coordinate chr16:83807978-83819737
Strand +
Gene summary The heat-shock response is elicited by exposure of cells to thermal and chemical stress and through the activation of HSFs (heat shock factors) results in the elevated expression of heat-shock induced genes. Heat shock factor binding protein 1 (HSBP1), is a 76-amino-acid protein that binds to heat shock factor 1(HSF1), which is a transcription factor involved in the HS response. During HS response, HSF1 undergoes conformational transition from an inert non-DNA-binding monomer to active functional trimers. HSBP1 is nuclear-localized and interacts with the active trimeric state of HSF1 to negatively regulate HSF1 DNA-binding activity. Overexpression of HSBP1 in mammalian cells represses the transactivation activity of HSF1. When overexpressed in C.elegans HSBP1 has severe effects on survival of the animals after thermal and chemical stress consistent with a role of HSBP1 as a negative regulator of heat shock response. [provided by RefSeq, Jul 2008]

Retrocopy(s) from HSBP1

Retroname Coord Strand Genomic Region ENSG
HSBP1P1 chr14:58463887-58464421 + Intragenic
ENSG00000258650 UCSC
HSBP1P2 chr4:110251631-110252113 - Intergenic
ENSG00000166530 UCSC

Expression

Transcript Sequences

>NM_001537.4
AGTCTCGTCGCGAGAAGCAGCGGCCCGGGGCGACTGAGCGGACAAACGGAAGTGTAGGTTACGGTCTGAGACATCACCGCCAAGCTGGGCATCGGGGAGATGGCCGAGACTGACCCCAAGACCGTGCAGGACCTCACCTCGGTGGTGCAGACACTCCTGCAGCAGATGCAAGATAAATTTCAGACCATGTCTGACCAGATCATTGGGAGAATTGATGATATGAGTAGTCGCATTGATGATCTGGAAAAGAATATCGCGGACCTCATGACACAGGCTGGGGTGGAAGAACTGGAAAGTGAAAACAAGATACCTGCCACGCAAAAGAGTTGAAGGTTGCTAATAATTTATACTGGAATCTGGCATTTTTCCAAGCCAAGAGAAGATCGAATGGCTTTTTGCAGCTAACTACTATGTGTAGACAGGTTTTATATTATAAAGTATGCATTCTTATCACCTAGTATATAGTTAGTTTGTAGAGTGATttccccccagtttcttgaacatggtatcttcacatcttggaccttggtcagttgtgctattcattattaaacaCTAAAACTTTGGCGGTTCTTGCATAACATTGTCAGATTTTTTAGTGTATTTCTGTGAAGTCATTTTTTTTCTTGTCATTCCTTTTGTAGTAGTTGCTGTTTGGATAAAAGTTGATGTGTGATTTTTTATTAAACAAATAGTAAACCCTTCAATTATAGTTAGTCTTGGTGAAGTAAGATGTTTGTAGACTTTAGAGTTCTTTAATTCTTGGCACAACGTGACTGTTGAGCTAACACCAAATAGTGTGTTGGCAATACTTTTCAAATGGCTGAAAACACCTAAAAATTGTTCATTCAGAAATATCTGTCACTGCTCTGTTGCCAAAACTCAGAATAGAACTTAGACGTATGTCTGAGTCCCTGAGATCACATGCTAAAGTCGATGAAAAGTAACCACTGCCACTGTCTTGTGTCAGAACTTTTACAGTACAGAAAATAACAGAATAGCCTTCTGTAATGAGGCGTTTGTTAGAGTTTTGCATGAGATTCTAATACTTCAGTAGGACCCTACCTACGTGGTTCATCTACAATGGTTACCATAAAAAATCTGGCAGGATTTTAAAACTCAATCAGTCTTTCCTTTGAGCTAGTGACTTGAAAAGAAAGAGAGAAGGAAAAGAGACCATATTAAGTCCATGCCAGTTGCTTGGCTAGAATATGATCAACGACTTGTAGTAGACTCAAGTTTTTAAAAAACACTATTTTACTTAAACTGTTTCTTATCTAAATTCTTGCAGAGTGTCAATGTTATCATTGATTATAGAAGACAGGGATAATACCTTTATCTCTGGCCACTCAAAAATGCAGTGCCAGGAGTGCTAAACCTAGAGGCCAATACTGATGACCTGGAAGGTGATCCATATGATTGTCACCACAAAGTGCTTTTACACAAAAACTTGAAAATTTGAAAAACATGATTTTTTTAAGTTTCTCATCTCACCAGTCTTGGTGTTTATATTGCAAATCTATCAAAGTAAGAAATAATTTGTGCTGTATACAAATTACATGGGGAACATAAAGGAGTGAGATCCTTCTGTGATAAAATGAATTCACCACTCTGGTTACCCAACTACAGAACCTCCTTTGATCAGGCCAGTAGGTTGTGATGCAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGATGTTCTCAAGCCTCGGAAGTGGCAAATGGAAATGATATGGCCGGTTGCGGTTGTAGGAGAGTTGTGACTtaggcaggagtcgacctcctcaagtaatggaacgatttcaaaggcaggctgccctgaccaaaaatatctgccatgaataaaggtgcctgaaatcctgctatgaagcttcctttgtgtcaaaaatctgtttggttttcagatggaaatgcagaaatcacattagagtatcaactaaaacctctggacggattaagtacaagtagcccaaggcaaagcAGGAGAGGGGGTGTTGGGGGAGGTTGCCTGCTGGAAGGGGAAGCTGAGGAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCaggtgtgttcccagaactcttgcccctggagatgctgcaggaaggaaggggttatggtcacttgggtttagacgacattctgtgaacctcatgaagaaattagcatattaaagactctgaaagtagagcagagaactcagctttaacctGCTCACCTGCTAGTTTTCGAggtctcgctctgttgcccaggctggagtgcagtggcacagtcatagctcacttggagcctgaagctcctgggctcaggcagtcctcctgcctcagcctcccaagtagctaatattacaggttcgtgccaccgcacctgggtcttgctgtgttgcccaggctggtctagaactcctaggctcaagcagtcctgtctcagcctcccaaagtgctgggattacaggctggagccaccatgcctgtccAAGGGTCTTTTTTATACTATATGAAGTATTCCTTCTCCAGCTATTCTTGTTCGTTTACCAGCCAGTGAAGATTCTCTTGAGGGCTGAACAATACAGATGAGTATGGGGGCCCTCGCACCAAGGAAAACAGCGTTACATTTAATTAAGTGCCCTGTCTCAAACCCCAAGGCCCCACAGcttcttcatttggcccctagttcatcctgctttcctttgagccacaggattttaaaatatttcaatcttattttcatatcaattttttctttgtttcactacaagtacagtcattgtttaaccctatcaggactaacacaatatttcacgtaactaagagttaatttgcccttgtgagtccttggaatttaagccccacacacacacacttagagcactgttgctatgggaacatagagtcctccaaacaaaagtgaactttttcaacatgctgtttgtaaatggaagccttccCAAGCAGACACTGTGTTCCTCTTTTATTTTGTATTTTGCACATTATATATTTTGATTAGATTAAAATGGAGGAATTTGCAGGATGTGTTGTCATATCTAGCCCTGAAAGTTAACTGGTTACAGTTACCAAATGTTCACagctagcgccattgaaagcattgactgtaaaccgctgtactgtgctaagccttttgtttgcactgtttggcttaatcctcacaacaacactgagaggttttcatttgatgagtcatatttaaagaaaaggaacccaagacggggagtcaggggcacaaggtcacagctggtaaTGATGACCCTGGAATGTCCTCACAGCTGCACACCTGCACCGCTCACAAACACAGCTGACCGTCTCACAGCTGCACACCTGCACCGCTCACGAGCACAGCTGACCGTCTCACAGCTGCACACCTGCACTGCTCACGAACACAGCTGATCGTCTGCCTCTTCGTGTGAGCTGAGCTCCGAATCTCAGCTGTCCAGGCTGTCTGGAAATCATCAGCCCCACTGGCTGGATCTCAAAATTTACTTTCAAAAGGCTGATGGAGTGTTTTCAATTAAACATGACCTAAAATTAAGTAATAAACACACTGGATGTGAGTTTTTATTTGGAATTTAAACTATTCAGAGCTGGTAGAAAATGTGTGCTCCTGGATCAGTGCCTTTTTTCTCCTAAATCAGTTGAGAACAACAACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAATATGAACCACAGGTTTTCACATTGGTTTTCCATGCCTATACCTGTCCTGTCTCCCACAAAAATTATTGCTTGAGGCCCAACCCGGGGGATAAAAAGACACCCCCCCGCCACTCCGTGACCTATTAGCTTACCATCCTATTGGATTTCACTGTTTTTTGTTTTGTGGTGTTTTTTTTTTATTGCAACGAAGACTTTTAAATGGACTCATGAAGAAGCCATCACCTGGAATCTTAATCTTGCATTAATTTTAAGTGTCTGATTTTAGCTGCAGCCACTTGAGAACTTTTCAATGAATGAAAATGAGGGAGGGGAGATGCAAGTCACTGCCCAAAAACAAAACCAGAGGAATTGTGATTGAACATTGCACTTATCAACCCTACAAATTAATATGGAAATAGGAAAAGGGTTTGTTTCAACAAGTCAGGATGACAGTATTTTAAAAAAGAAAAAAaggccagcctgggcaatatactgagactccatctctacaaaaaagtagaaaaattagcccagagtgtggtggcacacatctgtgctcccagctactcaggaggctgaggtgggaggatcatttgagcccaggaagtcgaggttgcagtgagctgtgatcggacgactccactccagccggggtgacagagcaagaccctgtctcaaaaaaaaaaaaaaaGGGCGGATCCTAACGCTTGGTCCTCACACCTGAGGCTCTCACTAAGAGGTGGCTGGAAGCTCCTCAGACCGCTGCCTAGGGTTCGAGTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCCCTGAGAATGATGAAATGTAATATGTGGCTGTCTCATCAACAGAGCTTCATTTTACCAAAGCATATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGCCTCATAAGAACACTCTTGACTGTCCTGCTTCACAATAATAATCTTCGCAATAATGATCTAATAATGGTCAAATTCTGTGTCTCTACCGTAGAAAACAGAATTTGACCATTTAGTCACGTTGGTCTTGCAAAATGTCCACCTTCCAAAAGAGAACAGTATTGCTTCCCAATAATTAAGAATAGTCTGGATTCAGGATCCAGCAGCttagaagcgtttagctaccaatagcaaaaatcagcccttttaacaatggtgggatgtattatttcacatggcaagaagtcccaagggagggcagctctggggcgagtaaattctgcacctcaGTAAAACTAAGAGCAAGACCCggccgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttctaaaccagcctggccaacatggcgaaacccccgtctctactaaaaatacaaaaattagccaggcgtggtggtgggcgcttgtaatcccagttgctcgggaggctgagggaggaggatcgcttgaactcaggaggtggaagttgcagtgagccgagatcgtgccactgcactccagcctgggtaacagagcgagactccatctcaaaaaataaaaaacaaaaaaataaataaaaAATAAAAAGACCCAACCCCAGATTTGTTCCACCTGGGTGCATCCGGTCAGAGAATGCCTTTCTTCTTCCCTTTTGTCTCCTAAGAGTGAAGAAAATGTTTCTTTGAAGGTGTTTCCACCCCACTCCTGTGCCTAAAATGATCCTGGCAAACAGGACCCGCATGATAGGTTGAGCCATGTGGTTCTTGTttttttgttgtcacaactcaggttgggggtgttactggcatcaagagtgtagaaaccagggatgctgcgtcaacaccctaccatgcacaggacaaccctcaccccaaagagtggcacagccccaagtgtcaacagtgctgaggttgaggaatccCAGCTTAACCCATTCATGAGACCACCTGAGCCTGGTGTAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAgaacaataccagggttccatcagaaaggaaatcagaatggctatcgggtggacaacctacagtgtttgctacaGACCTTCTAGATGTAACTTCTAGATTATAAACACTGGTAACACTGGAGATGGTTAAATCGGAATTAGCtgactgtcaaccttggtggcacattagaatcacctggggagcagttcaaaggcccaaaactgggcagcaccacagaaccctcacatcagaatccccatgggtgggcccagacagcagtgttcatcttagactccagtgtgcagtcgaggtcgagaacTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACCAAGTTCCATGGGATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTCCAACTTGGACAATCAGGGCTTTGACCCCCGTTACCTGGCATTCAATTCAATCCATGTGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCTGATTCCCTGATGGGTGATGACTCAGTAACCGGATTCAGCTTCAGATCTGCCTGACATTTTTCCTGCCTGTCCtgggccaggtatggcgctagctgctttcacctgtatcatctcattcactgctcaGAGGCTCTCGAAAGCTGTTGACATTATCAAAAAGTTTTCCAGCTGGAATTCATCTCCCTCTAATCAGCCTTCAAAACCTCCATTTGTAAACCATTGCTGTAGTTTTATtacctcttaccttggtctttacaagttgctgtcaaaacccagtaagtgtttacagaaagaaactttacatattaaatatcttaaaggtcttttatgcagaatatgcagttaattttgatgggctatggataatcatcagaagagccatttctggaaatgtaaataatatggctgtttcttttaacagtgcattctcctgaaaacataagaccatttgactgattctgctccagaatcttattgaggcaaaggactggaccgaattattcatggaacagaagcctaggactggtaagtccaggaaatgctgcaaaacaatgccctcaaaagaaatcagcctttccctttgataggtatctctcctgcaagccaggctcaggtgcgcctcaattagaacctgtgttcgctggggccataattaagaatcttaaagggaaagaatgttttgaaagccatctgtcaaaagtacgcAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACCGTGGGTCGGCACTGGGTCTGTGAGCCCTCATCCCCAGggctcggtttcctatcagaatccttgtctggaaggttgattatatcagatgcgcattttgccagcatcctcagaaggagatgcgaggaagattcttttcctgggccactctcattttctcaaacttggacaagtcttaacaataatctgtgacccaactttgtcttccccatgatgaaaaacagaccccatagaaactctctggcacaAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATTTCTTGGATTTATTCAAGCTGACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAGAATCCCTTTTATCCTAACGCTGACTAATAAACTGGTGAGAACTGTTTGAAATACCCATAAGTCAATGGAGGTCGTAATTTGCTTTTATGCTGTATTAAACACCACTGAGATGTTAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGCAGACGACCCTGTATCTGGTCTTGGTTCTGAAAGGTTTGCAGCGGCACCTAAGTCACTGAAGTTCTGGCAGAATTCATTCTCCTGCTCTCTACTGGGACTTGTTTTCCATAATTGGTCTGAGAACAACAGATTTTTTTCTTTTTTGCCTCGGATTTCAACAAAACATACATGGAAAGAATATTTTCTTCCTTGGAGACATTTCCCATAGGGcagtggttcttaaaatacgttcctgaaccggcagcatcagaatcccctgggaacgtgctggaaatgtagatccccaggccctacctagccctactgaatcagagaccctgggagggaggtccagcagcctgggttttaacacatcctccaggcgattctgaGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTGGGTTGCCCAACACCCTTTAGTCTAATGGCTTTAGGGTCAAATATGTCTAAACCAagaagccccatggggcactgattagcatgcaggtccccaggccccctttttgtagatcctgattcagaatatctgggacgggggctggagattcatatttttaataaattcccTCATTTATTATTTTTGTGTCTTATTTCCCATACACAAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTCTCAGGCCTGGGCTAGTCCTAAAATAATTGAAAAGGAATTGATTCTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTTCTGAACCGAGGAGTCCACCCCTAAGCCCGAGGAACTGAGCGTGAAGAGCCCTGACGCCATGAAGACTTGAATCACTTTAAAGCAATTTGCTTCTTATTAAAATGTACTTCAGTAAAAAATCATTTCAACTCTTAAGCCACAAAAGGATATCCAATCATTTAAAGCTTCCTGAGTGTTTCGGTTGATTAAAAAGCTTTTAAAGAGCATAGTAAATATTTTACCAGAAGGATAAGTTATTCAGTATGGAGATTATTTATTAAAAACTAGTAATTTATT