Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Spin1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name spindlin 1
Also known as Spin
Coordinate chr16:884854-930527
Strand -
Gene summary Predicted to enable methylated histone binding activity. Predicted to be involved in positive regulation of Wnt signaling pathway; positive regulation of transcription, DNA-templated; and rRNA transcription. Predicted to be located in nuclear membrane; nucleolus; and spindle. Predicted to be active in cytosol and nucleoplasm. Orthologous to human SPIN1 (spindlin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spin1

Retroname Coord Strand Genomic Region ENSG
Spin1P4 chrX:17963190-17963575 - Intergenic
N/A UCSC
Spin1P3 chr2:16886570-16887535 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001024796.1
CTTGGGTTTGCCTCCCTGAATGCGCCGGATAGATGTGCGGTGCGGATACTGCGTAGCGCCGGGGGTCGCGGTCCCTAGCGGCTTCCTGCACGGATGAGTGCTTGGGATTCCATGTGTTTTTGCTGAACTTGTAAAGGCGACACCTGGATGGTGGATTAACAAGAACACTGACCTGTGGGCAGCCTCAGCTGAGAACATTGGATTTTTCACCCTAGTCCAGCAGCTCTGCTGCTCACATAGATGCAGATGAATGAAGACCCCATTCGGGAAGACACCTGGCCAGCGGTCCAGAGCTGATGCAGGCCATGCTGGAGTCTCTGCAAACATGATGAAGAAGAGGACATCTCACAAAAAACATCGGACCAGTGTGGGACCAAGCAAACCTGTGTCCCAGCCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCATGGGTGGAGAGAGGGCAACGGCCCTGTCACCCAGTGGAAGGGGACTGTCCTGGACCAGGTGCCTGTGAACCCTTCCCTGTATCTCATAAAGTACGATGGATTTGACTGTGTCTATGGACTAGAGCTGAACAAGGATGACAGAGTCTCTGCACTTGAAGTCCTCCCTGACAGAGTTGCAACATCTCGGATTAGCGATGCACACTTAGCGGACACAATGATTGGCAAAGCGGTGGAGCACATGTTTGAAACAGAGGATGGCTCTAAAGATGAGTGGAGGGGGATGGTCTTGGCACGGGCACCAGTCATGAACACATGGTTTTACATCACCTATGAGAAAGACCCTGTCTTGTACATGTACCAGCTCCTAGATGATTACAAAGAAGGCGACCTCCGCATTATGCCCGATTCCAATGATTCGCCTCCAGCAGAAAGGGAGCCAGGAGAAGTTGTGGACAGCCTGGTAGGCAAGCAAGTGGAATATGCCAAAGAAGACGGCTCGAAAAGGACTGGCATGGTCATCCATCAAGTAGAGGCCAAGCCCTCTGTCTATTTCATCAAGTTTGATGACGACTTCCATATTTACGTCTACGATTTGGTGAAAACATCCTAGATGTCATCACAAACTCTGCCAAATTTGTGGAACTATTAAATGTATAATTTGTAGACATAAA
>XM_008771015.2
tgacctctgacttggttagcctggtctacagagcccaggacatccaggactgtccagaaattctgtctggaaaagaaaaGGTCTTTTTAGGGTGTGTTCCCAGGACTTTGACAGTTAACTGTCGTCCACTTCGAGAAGTAactgaccagagctgacactgacactgacaccatcactgTGAGGTCATTAGGTTATCAGGGTTTTGCATCTTTGCACAGCACTAATAGCAGGTGTTTCCCTACTAGTGTCTGTGTTGGTTTTGTTTTTAAGGTAGGGTCTGTATCCTTGACTGGCTCTGCACTCTGTACAGGGAAGGGTTGAAATTACCATCCGTGTGTCCGAGTGGATAGGTTCTCTCCTCATTAAGGTTCTGTTGGCTGTGTAGGTTTACCTTCCATCATCACAGATTTTGAAAGTTGCCTTCGATGGCAGGTGTCATGGCCCTTTTAAGACAGACTTGGTATTCTTTGTAAATGGCTGCCATAAGAAAATGACTCTGATTTCTTGTCGGAGCCGATCTCATGCTCAGATTTCAGCCAGGGGCCCCTTCTCGTGTAAATGCGCTTGATAATGTATGTTCTTCCCACCATGTGCTACTTTTCtctgtcactgagtcggggcttttccttcaaacctacacgttctctgtgggcactgactgttggttggttttacagttttacttagttctgacaacactgtctacatgggagttgtggcatcagacccTGGAGACACCCCAATACTTCATGCCAGCCCTGCTGTGCGTCTGGTTGGTCATCTTTCTTTCTAGCCCATAGGCTGTACCATTTGTTAGAACAGCTTTGCCTCGGGAAAGGTGTGTATTTGCTATCTTTTTGGTTTACTCCACAGGCCCCCTGGGGTACCTACCTCTCTTCtcattgacatgggaactctctgaaacgatggttgagttttcatgaatcctcattaccttggcaggattgggtacactgttggccattgctgactgaggctgcagcccctttttcctctctggaagtttgggttacaggttgaaagttctaaacttctCGCCCTGGAAGTTACCATTGGCATTTGGTGTTGTGCACACATTATTCACATGAGGACCTGGTGTTAGCAATTAACCAAATttcttataaaacagtgttggtgatagcagctggctttagactcaggatggcctgaggtaaccttcctgccttaccctcttgagcactcagattacaggtggcccaaaccatcatgcttgATGTCCAAAAAATTGAAATACTCATTTCTTAACTTCCATGGTACAGTGTATGTCACTGAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCCACCCCACCCACAGTGTCACtgtagctcagatttgccttgagggctctttgtcctgcctcagtccacaccttcagtgctgggtcacggacgtgctctaccacgcctgCTTGTGTGTGTTTACAGTAGAGCATTTATTCCAGCAAGTTCCGTGACCTTCATCAGGTTATTGTATTCTGCTGATCTCTTCTCTGTTTCcagggtgatacaggtgtggtttctgcagcatgttgtgtggaaggcaggaaagagcccagggaaaacacagctagtcatttttgccattctgtgcccacttcatacagtgcatttTTATAAGTCACCTCAACATTTTACAAATGGTCTTTGGGATCATTACTGAAGGATAATCTTGTTTGAAAATTAACCTCCTGAGAGAGAGATTAAAGATCAATAACCAGCCTGGGTAATTAGCTTCAGTCAACAAAGATGGACTTGAGGAAGGATAAAATCTCCCGCAACTCTGTATTACTGTGGGAAATTTTAAGTGTTGATGATGTTAATTTTCCCCATTCACTGTGCCCTTGTACATGTTTTGAGTTTCAAGTCAAAACATGACCCCAGCTTGTAGAGTCAAGGGTCAGCTGTGAGTACTTACCATGGCTTCCTCAGTCTGTTCTCACCAGAGCGAGGGCCCTGGTTGCATGCATAAGGGGAAAGAGATTTAGTAGGTAACCTAAGAACCTTTCCATTGTCTGTTCCCCCTTTTTTACCTGttttttttttcttaaatatatgtatggttgttttgctttcctctatgtattttcaccatagatggagaagcaataagagcatgtcagatagaccttggaactggagttacagacaactgtgagctctatgtgatgtgggtcctgtgaatttaacccaggaagagcaggtcatgctcttgatcactgatcatctctccagtcccCTGATCCTTTTTAGCAACTTGCCAGTAAGGTCCACTTGGTGACTTTCTTATAGCACTGGGGTAGGAGAGGAAATAGGTATAACATCTGCTATCCTAGAAACCACTACATTTGTTTAATTCTTTCCTTACTAAACCAGCCACATAATAAAATAACTTGAAGATGATCTGTGTCTCTAGAAAACTGAATGAATTAAATTAGTTCAGTCAAAAGAGCAATTCTATTTTCAGAATGCTGCTCTTTATCTGACTTTTCAAAGCACCCTGTGGCATCTATTGAGACGTGACAGGGCCCAGCAGctctgaatgccatcattgtgaagccgtttcatggactttttatggtttgggaacaaaaaaaagtcataaggaaaggcattttcaagtatattggtggaaatatcaggtaggcaagctacagcaaaaatgggtaatgtgttataagttcagatactatatgaagacattttGTTCATTCCCGATAGTCATGAGGACGCTAGGTCACACACTGAGGTGGACAATGAGTGCTCTGTAAAGGAACTGTTTGGCTCACTCCACAATCATGAAGTTCTAATTAGTCAGCAGTAGGTGGGCTTTTTTCTAGGAACTTTACTGCACATTATTATCCAAGAGTTCCCTTGTAGAGCTGGGGAGATGGCTCGGTGGTAAAAGTACTAATGCCAGCTGTGGAAAGACAGGGACAGGAGAATCCCTGGCAGCTCATCGGGTCAGGCACAGCTGGGGGTGGGGGGACCCAGACAGGGCAGGGTGAAGATTGATGGACACCCTGGCTGCCCTCAGATTTCTGCACCCCTGTTCCACATGCTCCGATGTATGTACACATGACAACAGAGCACAGGAGACTCATGTTTGCAAGTCCTTAGTTTCTCTTAAAGGTTTGTTAAATTCAGCTTCAAATAGCAACAGAAAATGTTGCCATGATAGTTGAAACCTAACGAGAAGGACACACAGTCTTCAGAACATTCGTGACTGAAACTTCAGTGCATTATTATTTATACAAGTTAAAGTTTTTCTTAATTTTTTGCATTAGTTTTATAAATGCAGAAAAGAGAAGTGGAATTATGGCTACTTTATTATTTATTTGTTTTTTTAAGCAAATTTAAGGTGTACTTTTagccatgtatagtggtacacatctttaattccatcccttgcgaggcagaggctggtatgtttctgagtttaggacagcaagggctggttgtgcagtaaggccctatcaaacaaaaAAGAtttgcttttatttttatatgtagagaatgctttaccttcctgtgtgtgccatctgtctacctggtcccgaggtcagaagagagtcagattccctggaattgtggcttctgcattgtccttgagttggttctgggagctaagcctggctcttctgCCATCTTTTCAGCCCTAGGAGTTGGCTTTTAAAATTGTGATACACTGTGTTGTGTTTATTATATGCTGTGGATGCTCTAGTGGGGAAATTCATGTAGAGGAGAGTTGCAATTGGCTGAACCAGTGACAGGACTGAGCCTGGAGGGCTCAGGACAGGGTCTCAGTTTTAGAGTAGCAAGGGGCCCTGGGTGGCTGTCAGTTGGGGTGGTGGGAAGTCCTTTATAGTGCAGTGGTCAAGCCATTGTGCTGGGTTGTGGCTAGCAGTGCTGAATGCTGCTCATATTACGAGAGAGTTGAACATGACATAAGAGCCTGCATGTTTTCCCTTCATATTTAGTGCTTTATCTAAGCACAGCAGAAGGGGAGCTGGGCCAGGGACCGGAAGACTGGGGGAAACTGAGCACTTGGAGGAGCACCATGTGGGTTGTGATGGACTCTCCCTGTAATCTCAGCAAGAGACTGAATAGGGAAAGACGGTAAAACCATGGAGTGGTGCACAGAGCTCTGAAATTGTTCATTTAGCCGTTGTAAGTAACATACAAGACCTAACACAGGAGCAGCAGCACCAGGACCCACCCTGCAGCAGTTGGAAAAAAATGTCTGATTGGGAAATGTATGTGTGGAAATGTTTCATTCCCTGGAACTGAATTTGATGTAAATGGTACTGCGTTTCTAAAACAATTTAGTATCTGCGTGTGTAAGAACTTTTTTTAGGAGTTCTCCTGGGTTTAGTGGATCTTTATGAGAGGTTGGGAGCAGAGAGGGAAAAATGAAGTTATGTTGTCTTTTTCCCAAGCTCTGGTCTGCCAGATTCATCTTACCTCCCTGAGGGACCTGCACCACCATCATCTCTCCCTGAAAAAGGGAGCCCTATTAAATCCTGGTGCCCAGCAGCAAGGAACTTTATTTAGGCCATAACAGGACAGTGAGTGCTCTCTGGTCTCTGCACAGCCTCTTCTCCACACTGGCTCTGACCTGGGAGCTGTCATTGCTCCAGGGATCGGTGCCTTCAGTTGAGAATTATGCTTACATTTCCTGTTATGTCTAGAGGCTCACTAGGCATTTTGCTGTCTCGACGCTCATTTTACAGAGTGCTTGGGATTCCATGTGTTTTTGCTGAACTTGTAAAGGCGACACCTGGATGGTGGATTAACAAGAACACTGACCTGTGGGCAGCCTCAGCTGAGAACATTGGATTTTTCACCCTAGTCCAGCAGCTCTGCTGCTCACATAGATGCAGATGAATGAAGACCCCATTCGGGAAGACACCTGGCCAGCGGTCCAGAGCTGATGCAGGCCATGCTGGAGTCTCTGCAAACATGATGAAGAAGAGGACATCTCACAAAAAACATCGGACCAGTGTGGGACCAAGCAAACCTGTGTCCCAGCCCCGGCGGAACATCGTAGGCTGCAGGATCCAGCATGGGTGGAGAGAGGGCAACGGCCCTGTCACCCAGTGGAAGGGGACTGTCCTGGACCAGGTGCCTGTGAACCCTTCCCTGTATCTCATAAAGTACGATGGATTTGACTGTGTCTATGGACTAGAGCTGAACAAGGATGACAGAGTCTCTGCACTTGAAGTCCTCCCTGACAGAGTTGCAACATCTCGGATTAGCGATGCACACTTAGCGGACACAATGATTGGCAAAGCGGTGGAGCACATGTTTGAAACAGAGGATGGCTCTAAAGATGAGTGGAGGGGGATGGTCTTGGCACGGGCACCAGTCATGAACACATGGTTTTACATCACCTATGAGAAAGACCCTGTCTTGTACATGTACCAGCTCCTAGATGATTACAAAGAAGGCGACCTCCGCATTATGCCCGATTCCAATGATTCGCCTCCAGCAGAAAGGGAGCCAGGAGAAGTTGTGGACAGCCTGGTAGGCAAGCAAGTGGAATATGCCAAAGAAGACGGCTCGAAAAGGACTGGCATGGTCATCCATCAAGTAGAGGCCAAGCCCTCTGTCTATTTCATCAAGTTTGATGACGACTTCCATATTTACGTCTACGATTTGGTGAAAACATCCTAGATGTCATCACAAACTCTGCCAAATTTGTGGAACTATTAAATGTATAATTTGTAGACATAAAGA