Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ITGAE
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name integrin subunit alpha E
Also known as CD103|HUMINAE
Coordinate chr17:3714628-3803766
Strand -
Gene summary Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. This gene encodes an I-domain-containing alpha integrin that undergoes post-translational cleavage in the extracellular domain, yielding disulfide-linked heavy and light chains. In combination with the beta 7 integrin, this protein forms the E-cadherin binding integrin known as the human mucosal lymphocyte-1 antigen. This protein is preferentially expressed in human intestinal intraepithelial lymphocytes (IEL), and in addition to a role in adhesion, it may serve as an accessory molecule for IEL activation. [provided by RefSeq, Jul 2008]

Retrocopy(s) from ITGAE

Retroname Coord Strand Genomic Region ENSG
ITGAEP1 chr6:38002955-38003127 - Intragenic
ENSG00000218521 UCSC

Expression

Transcript Sequences

>NM_002208.5
GCACTCGCCTCGGCTCCCACACAGCCGCCTCTGCTCCAGCAAGGATGTGGCTCTTCCACACTCTGCTCTGCATAGCCAGCCTGGCCCTGCTGGCCGCTTTCAATGTGGATGTGGCCCGGCCCTGGCTCACGCCCAAGGGAGGTGCCCCTTTCGTGCTCAGCTCCCTTCTGCACCAAGACCCCAGCACCAACCAGACCTGGCTCCTGGTCACCAGCCCCAGAACCAAGAGGACACCAGGGCCCCTCCATCGATGTTCCCTTGTCCAGGATGAAATCCTTTGCCATCCTGTAGAGCATGTCCCCATCCCCAAGGGGAGGCACCGGGGAGTGACCGTTGTCCGGAGCCACCACGGTGTTTTGATATGCATTCAAGTGCTGGTCCGGCGGCCTCACAGCCTCAGCTCAGAACTCACAGGCACCTGTAGCCTCCTGGGCCCTGACCTCCGTCCCCAGGCTCAGGCCAACTTCTTCGACCTTGAAAATCTCCTGGATCCAGATGCACGTGTGGACACTGGAGACTGCTACAGCAACAAAGAAGGCGGTGGAGAAGACGATGTGAACACAGCCAGGCAGCGCCGGGCTCTggagaaggaggaggaggaagacaaggaggaggaggaagacgaggaggaggaggaAGCTGGCACCGAGATTGCCATCATCCTGGATGGCTCAGGAAGCATTGATCCCCCAGACTTTCAGAGAGCCAAAGACTTCATCTCCAACATGATGAGGAACTTCTATGAAAAGTGTTTTGAGTGCAACTTTGCCTTGGTGCAGTATGGAGGAGTGATCCAGACTGAGTTTGACCTTCGGGACAGCCAGGATGTGATGGCCTCCCTCGCCAGAGTCCAGAACATCACTCAAGTGGGGAGTGTCACCAAGACTGCCTCAGCCATGCAACACGTCTTAGACAGCATCTTCACCTCAAGCCACGGCTCCAGGAGAAAGGCATCCAAGGTCATGGTGGTGCTCACCGATGGTGGCATATTCGAGGACCCCCTCAACCTTACGACAGTCATCAACTCCCCCAAAATGCAGGGTGTTGAGCGCTTTGCCATTGGGGTGGGAGAAGAATTTAAGAGTGCTAGGACTGCGAGGGAACTGAACCTGATCGCCTCAGACCCGGATGAGACCCATGCTTTCAAGGTGACCAACTACATGGCGCTGGATGGGCTGCTGAGCAAACTGCGGTACAACATCATCAGCATGGAAGGCACGGTTGGAGACGCCCTTCACTACCAGCTGGCACAGATTGGCTTCAGTGCTCAGATCCTGGATGAGCGGCAGGTGCTGCTCGGCGCCGTCGGGGCCTTTGACTGGTCCGGAGGGGCGTTGCTCTACGACACACGCAGCCGCCGGGGCCGCTTCCTGAACCAGACAgcggcggcggcggcagacgcggaggctgcgCAGTACAGCTACCTGGGTTACGCTGTGGCCGTGCTGCACAAGACCTGCAGCCTCTCCTACATCGCGGGGGCTCCACGGTACAAACATCATGGGGCCGTGTTTGAGCTCCAGAAGGAGGGCAGAGAGGCCAGCTTCCTGCCAGTGCTGGAGGGAGAGCAGATGGGGTCCTATTTTGGCTCTGAGCTGTGCCCTGTGGACATTGACATGGATGGAAGCACGGACTTCTTGCTGGTGGCTGCTCCATTTTACCACGTTCATGGAGAAGAAGGCAGAGTCTACGTGTACCGTCTCAGCGAGCAGGATGGTTCTTTCTCCTTGGCACGCATACTGAGTGGGCACCCCGGGTTCACCAATGCCCGCTTTGGCTTTGCCATGGCGGCTATGGGGGATCTCAGTCAGGATAAGCTCACAGATGTGGCCATCGGGGCCCCCCTGGAAGGTTTTGGGGCAGATGATGGTGCCAGCTTCGGCAGTGTGTATATCTACAATGGACACTGGGACGGCCTCTCCGCCAGCCCCTCGCAGCGGATCAGAGCCTCCACGGTGGCCCCAGGACTCCAGTACTTCGGCATGTCCATGGCTGGTGGCTTTGATATTAGTGGCGACGGCCTTGCCGACATCACCGTGGGCACTCTGGGCCAGGCGGTTGTGTTCCGCTCCCGGCCTGTGGTTCGCCTGAAGGTCTCCATGGCCTTCACCCCCAGCGCACTGCCCATCGGCTTCAACGGCGTCGTGAATGTCCGTTTATGTTTTGAAATCAGCTCTGTAACCACAGCCTCTGAGTCAGGCCTCCGCGAGGCACTTCTCAACTTCACGCTGGATGTGGATGTGGGGAAGCAGAGGAGACGGCTGCAGTGTTCAGACGTAAGAAGCTGTCTGGGCTGCCTGAGGGAGTGGAGCAGCGGATCCCAGCTTTGTGAGGACCTCCTGCTCATGCCCACAGAGGGAGAGCTCTGTGAGGAGGACTGCTTCTCCAATGCCAGTGTCAAAGTCAGCTACCAGCTCCAGACCCCTGAGGGACAGACGGACCATCCCCAGCCCATCCTGGACCGCTACACTGAGCCCTTTGCCATCTTCCAGCTGCCCTATGAGAAGGCCTGCAAGAATAAGCTGTTTTGTGTCGCAGAATTACAGTTGGCCACCACCGTCTCTCAGCAGGAGTTGGTGGTGGGTCTCACAAAGGAGCTGACCCTGAACATTAACCTAACTAACTCCGGGGAAGATTCCTACATGACAAGCATGGCCTTGAATTACCCCAGAAACCTGCAGTTGAAGAGGATGCAAAAGCCTCCCTCTCCAAACATTCAGTGTGATGACCCTCAGCCGGTTGCTTCTGTCCTGATCATGAACTGCAGGATTGGTCACCCCGTCCTCAAGAGGTCATCTGCTCATGTTTCAGTCGTTTGGCAGCTAGAGGAGAATGCCTTTCCAAACAGGACAGCAGACATCACTGTGACTGTCACCAATTCCAATGAAAGACGGTCTTTGGCCAACGAGACCCACACCCTTCAATTCAGGCATGGCTTCGTTGCAGTTCTGTCCAAACCATCCATAATGTACGTGAACACAGGCCAGGGGCTTTCTCACCACAAAGAATTCCTCTTCCATGTACATGGGGAGAACCTCTTTGGAGCAGAATACCAGTTGCAAATTTGCGTCCCAACCAAATTACGAGGTCTCCAGGTTGTAGCAGTGAAGAAGCTGACGAGGACTCAGGCCTCCACGGTGTGCACCTGGAGTCAGGAGCGCGCTTGTGCGTACAGTTCGGTTCAGCATGTGGAAGAATGGCATTCAGTGAGCTGTGTCATCGCTTCAGATAAAGAAAATGTCACCGTGGCTGCAGAGATCTCCTGGGATCACTCTGAGGAGTTACTAAAAGATGTAACTGAACTGCAGATCCTTGGTGAAATATCTTTCAACAAATCTCTATATGAGGGACTGAATGCAGAGAACCACAGAACTAAGATCACTGTCGTCTTCCTGAAAGATGAGAAGTACCATTCTTTGCCTATCATCATTAAAGGCAGCGTTGGTGGACTTCTGGTGTTGATCGTGATTCTGGTCATCCTGTTCAAGTGTGGCTTTTTTAAAAGAAAATATCAACAACTGAACTTGGAGAGCATCAGGAAGGCCCAGCTGAAATCAGAGAATCTGCTCGAAGAAGAGAATTAGGACCTGCTATCCACTGGGAGAGGCTATCAGCCAGTCCTGGGACTTGGAGACCCAGCATCCTTTGCATTACTTTTTCCTTCAGGATGATCTAGAGCAGCATGGAGCTGTTGGTAGAATATTAGTTTTTAACCATACATTGTCCCAAAAGTGTCTGTGCATTGTGCAAAAAGTAAACTTAGGAAACATTTGGTATTAAATAAATTTACACTTTTCTTTGCA