Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name CFAP144
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name cilia and flagella associated protein 144
Also known as FAM183A
Coordinate chr1:43142959-43156396
Strand +
Gene summary Predicted to be located in centrosome and ciliary basal body. Predicted to be active in ciliary base. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from CFAP144

Retroname Coord Strand Genomic Region ENSG
FAM183DP chr2:102249841-102250263 - Intergenic
 ENSG00000205716 UCSC
FAM183AP1 chr8:29921972-29922129 + Intergenic
 N/A UCSC
FAM183BP chr7:38685706-38686568 - Intergenic
 ENSG00000164556 UCSC

Expression

Transcript Sequences

>NM_001101376.3
GGAGACTGTGGAAGGCCCAGGCAAGAGGGCGCGTGGCAGCCCAAGGCCATGGCGGGACACCCAAAAGAGAAGGTGATTCCAGATGAGGTCCATCAGAACCAGATCTTGCGGGAACTGTACCTCAAGGAGCTACGAACCCAGAAACTCTACACGCAGTATCACGTGAATCCCCTCCGCAAGATTCATACAGTCACCAGGAAGCCCATGTCTTGGCATGATAACCTGGAGGAACCTGCAGATGCCAGGTTTCTGAATCTCATTCACCATGCTGCCCAGGGACCAAGGAAGAAGTACCCAGAGACACAGACTGAAAACCAGGAAGTTGGATGGGACTTAGAGCCCTTGATCAACCCAGAACGCCATGACCGCAGGCTGAATCACTTCAGGGTCTGCAGTGACATCACTCTGTACAAGGCTAAAACGTGGGGCTTAGGAGATGATCACCACAAGTAGCATCCCAGCGGATGAGCCCATCTGTGGATCTAATGCCTTAAGTGTGCACAGCCCAGAGAAATAAAATACTACTTTAAAACGAA
>XM_005270875.5
caagctggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgtgctcggcGATTCTTTTAAAATAAACTACAttatttaaggtatctagcagactcaaattcatagaaacaaaaagtgaaatgccaggggctggagagaagggaaaagggaaacttgttgtttaatgggtgtgaaaaagttctggagattggtttcacatagtttgaatatacttaatactactgtactgtaatacttaaaaatggctaagatggtaaaattatattacgtgcattttaaacacaaacattaaaaaTAAACTATAAAGTCAACAAGTTCCTTAATTAGGAAAGGTTTATTCTGTCAATATTATCACATTGGTAATCTTGGTCACACTGGCCAGAACGTTTTCTCAGAGAGGAAACCTCCGGTTTTTTTGTGAGGTTTTGATTCTGGGCATCTGCTTTAAGGTGGGAGAGGTTTCTGACTCCTTCCAAAAGCTTTTTTAGGAAATGATTGGCCAAGGTGAGGTCCAATCATCTGTCCCTTACCTCCTGGGTCTGCCCCTTGCCGGGAAGCCCTTTCCTGGCGGTATCCAGGGGACCTTCTAGTAACCAGCCGGGCCTGAGGAGCTGGGGCAAGTGAGTACAGTGCCAGAATAGGGCGGGGCGCGAAATAAGATCCCGACCGGCGGGCGCGGGGCGGGGCGATGCAGGCAGGGTAAGGGGCTGGCAGAGTGAGACCCGCCCCGACCGGGCAGCACTACCCGAGCGCTGTTGCCTGGAGACCACGGGACGCCGTTGCCTGGAGACAGCGGGGACGCGTTGCCTGGAGACTGTGGAAGGCCCAGGCAAGAGGGCGCGTGGCAGCCCAAGGCCATGGCGGGACACCCAAAAGAGAAGGTGATTCCAGATGAGGTCCATCAGAACCAGATCTTGCGGGAACTGTACCTCAAGGAGCTACGAACCCAGAAACTCTACACGCAGTATCACGTGAATCCCCTCCGCAAGATTCATACAGTCACCAGGAAGCCCATGTCTTGGCATGATAACCTGGAGGAACCTGCAGATGCCAGGTTTCTGAATCTCATTCACCATGCTGCCCAGGGACCAAGGAAGAAGTACCCAGAGACACAGACTGAAAACCAGGAAGTTGGATGGGACTTAGAGCCCTTGGTAAGCGTGGCTCCTTCCTCAGGAAATACGAGGAAACACAGCAGCAATATCAACCCAGAACGCCATGACCGCAGGCTGAATCACTTCAGGGTCTGCAGTGACATCACTCTGTACAAGGCTAAAACGTGGGGCTTAGGAGATGATCACCACAAGTAGCATCCCAGCGGATGAGCCCATCTGTGGATCTAATGCCTTAAGTGTGCACAGCCCAGAGAAATAAAATACTACTTTAAAACGAA
>XM_017001322.1
ttttttttaacttttaggctctggagtgcatgtgcaggtttgttatataggtaaactgcatgtcacaggggtttagtgtactgattatttgccacccagctaataagtatagtacaccataggtagtttttcaatcctctctctcctctcacgaccgtcaagtaCACATGTAGGagcaagagatttttagtaagaagagaggaataatggtttgaaaggaatcaaaaggagcaaagagaacctatacaccacattcccacactgaagtacttagagtttcagagaataagtagagtctctacctgaaatacacaggaagcaatgtcctcaagggaaatccaaattacatttaaagccaggagaagcaaggaactgtccgtaaagaagcagtctaaggaaatagggaagtttactaatcatgcagctgaacttccatagagtacaactgaaagtaagggaggaaaagggtgttgggtcaagaaagaacaatcagaatattatggtgataaaaataccagagagaataggtgagcaaagggacttatgatttggatggtgatcaaagaaaccaggaatGGTCAGCAGAGGGGGTTGCTTCATCAGACTAAAGAAAGGGGGAGGGTGCACTCTCCTTAGTTATCTGACATGGAGACAGGCATCTCTGGTAGTGAGCAAGGAAGTCCAAATCTAGTCGTTAGGCACCCAGGAGTGGGCAGTCATCCTGCCAGTCTCAGCCCTACGTTTATGGTTCCAGTTAAGAGTAAGTCATCAAACCAAGAGAACACAGGAACCAAGATGGTACGCTCCAAAAAGTTCAGTTCTGCTCTGAAGCGCCCCCTACAGGATCCTGTTCAGAGACGCAGGAGGAGGCAAAGCTGCTGGTCTGCGCTTTGCGCCATTCTGTGCTCCCTCCTACCTGCCCTCTTTTggcccaagttctagtcccatctgctttgtcaccccctgcccacctaagggacttcattctctggtcttcaccgtcctcatggtaaaatgGACGTGACATCTTTAATCACACATATCTATCCAGTGATGTAAATGCAGTGAAAAGGGCTTTGAACAGTGTTGTCAGGGAAGGAGACTGAGGCACTAATTTCTTCCCATTTTCCCAATTCCTGCTTCAGCACCGCTCACCTAGGCTCCAGCCCTCTAAATCTATCCTAGCCCTTTGGTCGATCTTTGCCTACTGAGGGCAAAATTACATAGtatcccaaaaacaaggattaatactacagccccatttcttctctttgccatttcccatgacaactcttaaacctagaaactggtgccatttccctgattggtgggacctgctcactagaccaaaagggatgtgtatgtacatttcataatgggcattcagttaggggatgatgtgagggctgtgtgtgAGATAAATCCTGGAGTTGGTCTGGCCACATCCCAATGACTCATTTGGACTCCTTTGGACAAGTAACTAGAGCTCCCATTTGAAAGAATGACAAGCAAGCTACCTCAAATTTCTCTTTCTCAACCCATGACTTCACCTTTTCTGTTCCTTAATGCTCTCATCATCCAGCCCTCCTTTCTGCTGTTTTTCCTCAGTTTTCAAGCCTGCACCCTAGTCTTCTGTGCCATCCCACTTTTTTGGGGTTCTGCCCTATCTGTTACCCCTCTCCGAATAATGTCAGCCCCGCCCACTACCCTACTGTAAGGATCTGCCCAGCTCTTCCTCTGTGGGTTTTAAACCGTGCATCTGCTGCCACCACGTTCATCAGGGTCCCAATTTCCATTACACCCCTGCCTTTCCCCCGCTCCTCCTCCTAGCCCTTGTTTCTAATCCCCTGTACTCTAGCTCCCACTCCCAATCGAGCCACCCCCAACCAACCATGACAATTCACAGCTCTCATCCTGGAGAGATGGTTTCCCTCATGCTGGGACAGTTCTGGGGCAGTTCAGAATTGCCAGGACTGTGGATTCCCAGCAGCTTGGCCTGGTGGACACACGGAATGCAAGACAACAGCAAACCCACCTTCAGCCTTGTTTGCTCCTTTCCTCTCATGCCTGGTCAGCCAGCCTGCATGAGGTTCTCTACGTTTGAGACTGGCTTCTCCACGGAACTTGGTCTGTAGCCACAGAGCAAACTGCAGGGCCATTGACAGAGAATGAAGAGGAGAGTGAAGAGTGGAACACATCTAATGTGTTCTCTGGAGGTTCATACAGTCACCAGGAAGCCCATGTCTTGGCATGATAACCTGGAGGAACCTGCAGATGCCAGGTTTCTGAATCTCATTCACCATGCTGCCCAGGGACCAAGGAAGAAGTACCCAGAGACACAGACTGAAAACCAGGAAGTTGGATGGGACTTAGAGCCCTTGGTAAGCGTGGCTCCTTCCTCAGGAAATACGAGGAAACACAGCAGCAATATCAACCCAGAACGCCATGACCGCAGGCTGAATCACTTCAGGGTCTGCAGTGACATCACTCTGTACAAGGCTAAAACGTGGGGCTTAGGAGATGATCACCACAAGTAGCATCCCAGCGGATGAGCCCATCTGTGGATCTAATGCCTTAAGTGTGCACAGCCCAGAGAAATAAAATACTACTTTAAAACGAA