| Gene Name | YBX1 |
|
| Specie | Homo sapiens | |
| Full Name | Y-box binding protein 1 | |
| Also known as | BP-8|CBF-A|CSDA2|CSDB|DBPB|EFI-A|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 | |
| Coordinate | chr1:42682418-42703805 | |
| Strand | + | |
| Gene summary | This gene encodes a highly conserved cold shock domain protein that has broad nucleic acid binding properties. The encoded protein functions as both a DNA and RNA binding protein and has been implicated in numerous cellular processes including regulation of transcription and translation, pre-mRNA splicing, DNA reparation and mRNA packaging. This protein is also a component of messenger ribonucleoprotein (mRNP) complexes and may have a role in microRNA processing. This protein can be secreted through non-classical pathways and functions as an extracellular mitogen. Aberrant expression of the gene is associated with cancer proliferation in numerous tissues. This gene may be a prognostic marker for poor outcome and drug resistance in certain cancers. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on multiple chromosomes. [provided by RefSeq, Sep 2015] |
| Retroname | Coord | Strand | Genomic Region | ENSG | |
|---|---|---|---|---|---|
| YBX1P13 | chr10:92877865-92878291 | - |
Intragenic |
ENSG00000225118 | UCSC |
| YBX1P11 | chr1:226317171-226317611 | - |
Intergenic |
N/A | UCSC |
| YBX1P1 | chr14:66012432-66013928 | - |
Intergenic |
ENSG00000224861 | UCSC |
| YBX1P14 | chr15:62953034-62954530 | + |
Intergenic |
ENSG00000259394 | UCSC |
| YBX1P7 | chr2:132488188-132488890 | - |
Intragenic |
ENSG00000232349 | UCSC |
| YBX1P12 | chr2:174172497-174172688 | + |
Intragenic |
ENSG00000270799 | UCSC |
| YBX1P3 | chr3:114930599-114931856 | + |
Intragenic |
ENSG00000240002 | UCSC |
| YBX1P2 | chr7:105581856-105583373 | - |
Intergenic |
ENSG00000231167 | UCSC |
| YBX1P4 | chr7:152129442-152130067 | + |
Intergenic |
ENSG00000213188 | UCSC |
| YBX1P6 | chr9:109532415-109534471 | - |
Intragenic |
ENSG00000213539 | UCSC |
| YBX1P10 | chr9:35970939-35972457 | - |
Intergenic |
ENSG00000213866 | UCSC |
| >NM_004559.5 |
| ATTCTCGCTAGTTCGATCGGTAGCGGGAGCGGAGAGCGGACCCCAGAGAGCCCTGAGCAGCCCCACCGCCGCCGCCGGCCTAGTTACCATCACACCCCGGGAGGAGCCGCAGCTGCCGCAGCCGGCCCCAGTCACCATCACCGCAACCATGAGCAGCGAGGCCGAGACCCAgcagccgcccgccgccccccccgccgcccccgccctcagcgccgccgACACCAAGCCCGGCACTACGGGCAGCGGCGCAGGGAGCGGTGGCCCGGGCGGCCTCACATCGGCGGCGCCTGCCGGCGGGGACAAGAAGGTCATCGCAACGAAGGTTTTGGGAACAGTAAAATGGTTCAATGTAAGGAACGGATATGGTTTCATCAACAGGAATGACACCAAGGAAGATGTATTTGTACACCAGACTGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCGCAGTGTAGGAGATGGAGAGACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCAAATGTTACAGGTCCTGGTGGTGTTCCAGTTCAAGGCAGTAAATATGCAGCAGACCGTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCTCCACGCAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGAAAAGAACGAGGGATCGGAGAGTGCTCCCGAAGGCCAGGCCCAACAACGCCGGCCCTACCGCAGGCGAAGGTTCCCACCTTACTACATGCGGAGACCCTATGGGCGTCGACCACAGTATTCCAACCCTCCTGTGCAGGGAGAAGTGATGGAGGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAGTGAGGCAGAATATGTATCGGGGATATAGACCACGATTCCGCAGGGGCCCTCCTCGCCAAAGACAGCCTAGAGAGGACGGCAATGAAGAAGATAAAGAAAATCAAGGAGATGAGACCCAAGGTCAGCAGCCACCTCAACGTCGGTACCGCCGCAACTTCAATTACCGACGCAGACGCCCAGAAAACCCTAAACCACAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGGGCTGAGTAAATGCCGGCTTACCATCTCTACCATCATCCGGTTTAGTCATCCAACaagaagaaatatgaaattccagcaataagaaatgaacaaaAGATTGGAGCTGAAGACCTAAAGTGCTTGCTTTTTGCCCGTTGACCAGATAAATAGAACTATCTGCATTATCTATGCAGCATGGGGTTTTTATTATTTTTACCTAAAGACGTCTCTTTTTGGTAATAACAAACGTGTTTTTTAAAAAAGCCTGGTTTTTCTCAATACGCCTTTAAAGGTTTTTAAATTGTTTCATATCTGGTCAAGTTGAGATTTTTAAGAACTTCATTTTTAATTTGTAATAAAAGTTTACAACTTGATTTTTTCAAAAAAGTCAACAAACTGCAAGCACCTGTTAATAAAGGTCTTAAATAATTGTCTTTGTGTAAATTTGTCTAGTTTTGCTTTAGTTTGTAAGTATTTAGCTATTTATAGGACCCTTAGCTTGACCCAGTCTACAAATAGATGATGCTCACTGGTAATTCCCTCAGGTAAAATGTCTCAAAATCTCTAATCCTTTAAGTGGCATGCCTGTGGGCCCATACTAAAAATTAGAAAATACATACTCTGATAACCTGGCCATTTTTCATTGAAGGATTTAGCTCATTTGTAAGAAAGACTTGAGTGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCATTGCTCTAGCCTAGACCGACCAGACTCTCATCCTGCTCCACTTAGTTTTGTCACCTTGGGAGAATTTGTTTCAGTGTGTCAATTGAAGATGCCAATTGAAGTGTTAGGACAACCTGTCACACTGCCTGGTGTGGTCATCAAATATTGGTTCAGCTCCTTATGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAACATGGAGGTTGGTGAGCTTGTAATTATGTGGTTCTCAACACCTTAAATCCTAAGCCTAGTCTGGCTGATCttttctctttttgagacggagtcttgttctgtcatcaggctggagtacagtggcacaatcttggctcactgcaacctccacctctaggtttaagcgattctcctgcctcggccaccttagtagctgggagtacaggtgcgtgccaccacacccagctaatttttgtatttttaatagagatggggttgcactgtgttagccaggatggtcttgatctcttgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccTCTCTGGCTTTTGTTTTCTAATGTTTTGTTAGATGTTCTTTGGCTTGCTTTGTGAAATAGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCCAGCTATCAGGGCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGACTAACTCTTTGCAGAGGACTTGATAAGAGACTACTCAAAAAAAATTTTTTTAACCCTACTTAGTGTAAATATCTGTACTGCAGAAGTGAGTTAGCCTATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCTGAAACTTCAACTGTTGGTAGCATCTAAACTGTTACTTACAACTGCAGACGCACACAGTCCCTGACTTAAACAGTGGTTTGACTTAGGGGCTTTTAGTGGGGTtacggtttctactgaatcaacattgttttcatggcatcacagagttgaaaaatcataaatgaaaccattgtaagttgACTGCAGTGTTGCCAACattaaatgcagtttcaacttaa |