Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ALDH7A1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name aldehyde dehydrogenase 7 family member A1
Also known as ATQ1|EPD|PDE
Coordinate chr5:126541841-126595219
Strand -
Gene summary The protein encoded by this gene is a member of subfamily 7 in the aldehyde dehydrogenase gene family. These enzymes are thought to play a major role in the detoxification of aldehydes generated by alcohol metabolism and lipid peroxidation. This particular member has homology to a previously described protein from the green garden pea, the 26g pea turgor protein. It is also involved in lysine catabolism that is known to occur in the mitochondrial matrix. Recent reports show that this protein is found both in the cytosol and the mitochondria, and the two forms likely arise from the use of alternative translation initiation sites. An additional variant encoding a different isoform has also been found for this gene. Mutations in this gene are associated with pyridoxine-dependent epilepsy. Several related pseudogenes have also been identified. [provided by RefSeq, Jan 2011]

Retrocopy(s) from ALDH7A1

Retroname Coord Strand Genomic Region ENSG
ALDH7A1P4 chr10:62741007-62741386 - Intergenic
ENSG00000234489 UCSC
ALDH7A1P1 chr5:77290183-77291997 + Intragenic
ENSG00000251400 UCSC
ALDH7A1P3 chr7:150541567-150542100 - Intergenic
ENSG00000243853 UCSC

Expression

Transcript Sequences

>NM_001201377.2
ATCCCGAGTCCCGGGCTCAGTATGTGGCGCCTTCCTCGCGCGCTGTGTGTGCACGCTGCAAAGACCAGCAAGCTCTCTGGACCTTGGAGCAGGCCTGCCGCCTTCATGTCCACTCTCCTCATCAATCAGCCCCAGTATGCGTGGCTGAAAGAGCTGGGGCTCCGCGAGGAAAACGAGGGCGTGTATAATGGAAGCTGGGGAGGCCGGGGAGAGGTTATTACGACCTATTGCCCTGCTAACAACGAGCCAATAGCAAGAGTCCGACAGGCCAGTGTGGCAGACTATGAAGAAACTGTAAAGAAAGCAAGAGAAGCATGGAAAATCTGGGCAGATATTCCTGCTCCAAAACGAGGAGAAATAGTAAGACAGATTGGCGATGCCTTGCGGGAGAAGATCCAAGTACTAGGAAGCTTGGTGTCTTTGGAGATGGGGAAAATCTTAGTGGAAGGTGTGGGTGAAGTTCAGGAGTATGTGGATATCTGTGACTATGCTGTTGGTTTATCAAGGATGATTGGAGGACCTATCTTGCCTTCTGAAAGATCTGGCCATGCACTGATTGAGCAGTGGAATCCCGTAGGCCTGGTTGGAATCATCACGGCATTCAATTTCCCTGTGGCAGTGTATGGTTGGAACAACGCCATCGCCATGATCTGTGGAAATGTCTGCCTCTGGAAAGGAGCTCCAACCACTTCCCTCATTAGTGTGGCTGTCACAAAGATAATAGCCAAGGTTCTGGAGGACAACAAGCTGCCTGGTGCAATTTGTTCCTTGACTTGTGGTGGAGCAGATATTGGCACAGCAATGGCCAAAGATGAACGAGTGAACCTGCTGTCCTTCACTGGGAGCACTCAGGTGGGAAAACAGGTGGGCCTGATGGTGCAGGAGAGGTTTGGGAGAAGTCTGTTGGAACTTGGAGGAAACAATGCCATTATTGCCTTTGAAGATGCAGACCTCAGCTTAGTTGTTCCATCAGCTCTCTTCGCTGCTGTGGGAACAGCTGGCCAGAGGTGTACCACTGCGAGGCGACTGTTTATACATGAAAGCATCCATGATGAGGTTGTAAACAGACTTAAAAAGGCCTATGCACAGATCCGAGTTGGGAACCCATGGGACCCTAATGTTCTCTATGGGCCACTCCACACCAAGCAGGCAGTGAGCATGTTTCTTGGAGCAGTGGAAGAAGCAAAGAAAGAAGGTGGCACAGTGGTCTATGGGGGCAAGGTTATGGATCGCCCTGGAAATTATGTAGAACCGACAATTGTGACAGGTCTTGGCCACGATGCGTCCATTGCACACACAGAGACTTTTGCTCCGATTCTCTATGTCTTTAAATTCAAGAATGAAGAAGAGGTCTTTGCATGGAATAATGAAGTAAAACAGGGACTTTCAAGTAGCATCTTTACCAAAGATCTGGGCAGAATCTTTCGCTGGCTTGGACCTAAAGGATCAGACTGTGGCATTGTAAATGTCAACATTCCAACAAGTGGGGCTGAGATTGGAGGTGCCTTTGGAGGAGAAAAGCACACTGGTGGTGGCAGGGAGTCTGGCAGTGATGCCTGGAAACAGTACATGAGAAGGTCTACTTGTACTATCAACTACAGTAAAGACCTTCCTCTGGCCCAAGGAATCAAGTTTCAGTAAAGGTGTTTTAGATGAACATCCCTTAATTTGAGGTGTTCCAGCAGCTGTTTTTGGAGAAGACAAAGAAAATTAAAGTTTTCCCTGAATAAATGCATTATTATGACTGTGACAGTGACTAATCCCCCTATGACCCCAAAGCCCTGATTAAATCAAGAGATTCCTTTTTTAAAAATCAAAATAAAATTGTTACAACATAGCCATAGTTACTAAAAGATGAGTTAGGTGGATTTTTATTATGTCAACTAGTTGTACATGGCTTTTTAAAAGTTAATGATTATTTTGTAATTAGAAAAAAATAGTACGTACCAGGGTAGGAATTTGGGAAAATACAGAACCGAGGAGAAAACAGAAGTCTTTGCAGTAGATACAGGGTGTCTCCTGACCAAGTGAAGGATTCAGGGGCGGGGGGTGAATATTGCTTGACATTACCCACCTATGGCATGTGTTGGATGTCGTGTGATTGAAAGGGGGATGCATTCCCCTGTATGCTTGGACCACAGTTCAGTATTCATGTGGAATAACTTGCAGTGCTTAAAATGACAACAGGCATTCATCACAGTTATGGCTCTTGCTTATGAAGGCTGTGTCAACTTGGAAGAGATTTCTGGGGTAGACAGATTTTGTTCCTGTGCTGGAGTCTGCCACCTGCTGGAGGACTCTGAGGCCAAAATTGCCCGTGCAGAGTTGTATAGAAAATGCGTCTGGAggctgggcaaggtggcttacgcctataatcccagcactttgagaggccgaggcgggtggatcagtagaggctaggagtttgagaccagcctggccgatatcgtgaaaccccgtctttaccaaaaaatacaaaaattagcccagtgtggtggcaggcacctgtaatcccagctattagggaggctgaggcaggagaattgtgtgaacccaggaggcagaggttgcagtgagcctagattgtgccactgcctgggcaacagtgagatcctgtctacaaaaaaaaaaaaaaaaaaaaGTGCATCTGGATTTTTTTATACAACCTTAGACCACCTTCTTTAGCTTTAGGCGTCTGCGGTTGCCCTTGGATCTGTTCTCAATCCTCAGTGTGTGTGGCAGCATGTGGTCATAGAGAGCTGGGCAAAGTTCACTTTCTCTTTGCTGACAGTCTCACCTTTTCTCACTGGGAAGCTGCACAGGAGCCTTTGGGCTGGTTCAGCCCAGAGGCCCCTGTTCTCCTGCCTTCCTGGCATTCTCTGCTCCCCTTCTGCATGGCACCCCTCTACTCCTGCCAGGTTAGAATGGAGCAGAGGCCTTTGaacaagatgacatttgtagacaacctgatccatcaggatgtggagagatctggacaaatggcaaataatttggggttgaattatggcccagagaagtaagcaaatgaaaaactaaacaattataaatgtatctgggaagcaaaggtattcataatatgtcccatggccagctgcgagcagtatttaactagacatgctgttgtcaatattgaacatgaatcaagccaaatactgatatagctattgagagaaGGTTGGCAGGAAGAAATCATGGGTGAGGGTATGTGGGAGTGATAATCTTAGCTATAGATTTTAGGTAAAACTGATTCTGAAAGCTTTCTTTGAAACAAATTTATAATTTTTCTTCTACATGTTTCTAGCACAAGGACTCAATTTTTTTTGGTTATAATGTTCATTAAAACATATGCCTTCAATTTGTTCCTCTTTGTTCTTTTTTGCTGATTTAGCAGATATAAATCACTTGTTAGTATTTTTAACTATCCAAGTTAAAATGTACATTTGTAAGTGTTATTACTGGTCTTATATTTGAAGGTGCAAGGGGTCTTGTGCTGCTCATTACTGGTTATCTTGAGCATTTCATAACTGCTGCCTCCTCCTAAATCCTGTGTTCCAACCGCTACTGCTGGCAATGCCCAGCCTCCATTGTGGATGCGGGGAATTGTGTTCAGCATGCTTGCTTCTGCCACGGCACTAAAGCCTAACTTGCTTAGGATCTTGCTGTACTTGGAGAGAGCATCCATTCGCTGAGCCTAGCAGCCAGGCTCTTGTGACTCCCTGGGAAGTGGGTGAAGACCTGGCTCCTGGCTGCAGCAGTGAGGAGGCAGGCCCTCCAGGTGAAGACTTCTCACAATGGAGGGAAGGCAGTTTTCTCAAAGGAAATTGAGTGCTATTATGTACTCTGCTTCCTACTTTCTCTTTCAGGGTGGGAATCTGTTAAGCCTCCTCTCTCTCTTGCTCTGCAACCACAGAACACttctttttttttggtgtctcagttttgcccacactggagtgcagtggtgcaatagtggctcactgcagcctccaactcctgggctcaatctatccttccacctcatgctccccagtagctgggactacaggtgcatgccactgtgcccagctgattattatttttttttgtaaagattgggtcatactacattgctcatgctcgtcttgaacttgtggcctcaagcgatcctcctgcctcagcctcttgagttgttgggattacaggagtgtgccaccatgcccagcTCTGTGGAAAATTCTCTGTGGCATTCTGTCTCCTGAAAATGCTGAAGGGACCAAGAGGGCTCTGTGTCCTTCCTCTTCTCTTCCCTGGCACTTTCAGACCATTTTCTTGTTGCCTTCATTCTAACAAAGGTTGCAGATTGGAAAGCTGATTTGGAATGCTTTTTAAGTGTTTTCAGTTTCAATATTTTTATGAAATTCCTATGGTCTCCAACAAACttttttttttttttttttttCTACACCTGGAGCTTATCCTGCAGAAGCTTCCTGCCAATGATTGTTTTGGAGGAAATTAAAAGAAAACCAAACGAAACCTCTCCTATCCAAGGGGAAGAACTTTATCCCCATATTGATTGAATATAGGATTCTAGATTTAAAATGTTGTAGGCAGTTAGAGTTTGCTCTTTTTTTTTTTCTATTGGAAAGGTCCACAAATGTTTTATTGACATTTTTGTCTTTAATCCATTTGGATTTGGGGTACATGTTACGATTTGTCTACGTTAATTTCCCTTTTAAAAATAAAAATAATTCCTCAACTCCAA