Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name TRNT1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name tRNA nucleotidyl transferase 1
Also known as CCA1|CGI-47|MtCCA|RPEM|SIFD
Coordinate chr3:3126940-3153435
Strand +
Gene summary The protein encoded by this gene is a CCA-adding enzyme which belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. This essential enzyme functions by catalyzing the addition of the conserved nucleotide triplet CCA to the 3' terminus of tRNA molecules. Mutations in this gene result in sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

Retrocopy(s) from TRNT1

Retroname Coord Strand Genomic Region ENSG
TRNT1P1 chr1:163237205-163239190 + Intragenic
 ENSG00000225755 UCSC
TRNT1P2 chr22:45792420-45793598 - Intragenic
 ENSG00000235347 UCSC

Expression

Transcript Sequences

>NM_001367322.1
AGCCCGGAAGTGCGCGTggcggcggtggcggctgcggcaacagcggggccggTAAGCGGGCGCGCGCCGCTCAGAGGGGCAGAGTTGGTGGCGTGAGTTGCTGCCCCTTCCTTCCTGCTGTGGGCCAGAGGCGCCACCGCGCCCGGTCCTCGAGGAAGACGGGAGCGGGACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGACCGCAGGCGCGGATTCCTTGGCTTCCCTCAGCACTTTCCCCTCCGCGCGGACGGCCCCGAGACGCTTTTTCACTGGGCCTTGTCGCCAGCACCCGGCGTGGGGGATGTGTAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGAATTATTTGTCAAAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTTGCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAAGCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAAGACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTAGGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGCTAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTGACCATGATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTGGAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATATAGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACCAAAGCCAGTGACTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGTTCAGACCCATTGAAACCCTATCAAGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTCTCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACTTCTGAGTTACATAAAGAAGACCTAAAACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAAGACTAAATTTTCTCCCCTCCCTCTTAATGAGGTTTTAGAGACTACACCAGAATAAAAGACAGTTTAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTGAATTATATATTTCAAGAACTAAACAGAGATCCACCTTTCTGGATCTGATTTATATCACTGAAATGTACAGTTCTTTTGGAATAGTTTCACCTGAGAAAACATAGTTGGCTATTATCTATCTTAACCTGTTCAGGCTTTTAAAAAAAACTGTTTTTGCATAGGGTAGTACTAAGATCTTAAAAAGTGGTAACTGTCTTGAAGAAAAAACGTTTATTGTTTGTTTGCAATTGAAATAACAGGGTTACCTTAACAATGACTGTCTATGATGTGTCAGTTCTTATCTGAATTCCAAAATAAACCTGTGCTTAAAAAAGAAATAATTGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTATGTGGTTGATATTTTTCTGTCACAATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAGCCTATTAATTAATTATTGTTTTAATAAAACAAACATTGGTATTGGAAGATAAATATGTTTATGTGGTATCTGACAATGTGTATTAGGTGTCATATACAATGGTAATATGCCTGTCTTTAAAGTGTTATTTTATTAATTAAAAGGATATGGCTATTATTATATATTCTCTAAAGATTTGAGTCCTAAATGCTTTCATCAGGTAAATAAAATGTATAATACAAA
>NM_001367323.1
AGCCCGGAAGTGCGCGTggcggcggtggcggctgcggcaacagcggggccggTAAGCGGGCGCGCGCCGCTCAGAGGGGCAGAGTTGGTGGCGTGAGTTGCTGCCCCTTCCTTCCTGCTGTGGGCCAGAGGCGCCACCGCGCCCGGTCCTCGAGGAAGACGGGAGCGGGACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGACCGCAGGCGCGGATTCCTTGGCTTCCCTCAGCACTTTCCCCTCCGCGCGGACGGCCCCGAGACGCTTTTTCACTGGGCCTTGTCGCCAGCACCCGGCGTGGGGGGTGAGACGCGCCTTTTCAGGGCTGGGGTTCCCCAGAGCGTTTTCCTAAGTCGAGGCGGAGGTGCGAGGAAACTGAGTGGGTCTTTCCGCCCCACGTGGCCTGCCGGGAAGCGCGGCTCCTCCACCCGCTTCCGTGGAATGGAATGGTTTTTCTCTGCAGGTTTACACCGGGGTCACTCGAGAGCTGCTGCGGCCTCCTTATGGGCAGGACCCCCGTATGGGGAGAACGAGGATGTGATATGTAGAAGGGAAGGCCGCGGTGTGCCAGAAATCAGAGGAGATTGCAAGATGGCAGGAAAAGAATCAGGAAAATGGGGGCAGCAAAACTAAATTCATGGGAAAATACAATGTCTAGGAGCTATCCCAGGGTCGTGAATCCTCGAGTGCAGGTGGGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTCGGTTAGAGTTTCTAGAACCCCGCATCCCTCTCATACTGCCTGAAGCCCTGCTCTGGGGAGAGTGTCATCACAGTACCATGTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCaccaaaccgagggttgggctgcttattctcgctgcccaataatgagatgcagataaactaggaaagaaaggagtttatttctgtaaccaggtacggggcgaaggcgtggaaaatatcccagaccgactcagaattacagagctttccagagcttatataccttATGTGTAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGGTGGAGTAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGAATTATTTGTCAAAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTTGCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAAGCACGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAAGACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTAGGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGCTAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTGACCATGATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTGGAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATATAGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGATGGTTTTTCACCAAAGCCAGTGACTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACCTTGGCTTATTTATAGTTAAAAATAGGAAAGATTTAATTAAAGCAACAGATAGTTCAGACCCATTGAAACCCTATCAAGACTTCATTATAGATTCTAGGGAACCTGATGCAACTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTCTCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACTTCTGAGTTACATAAAGAAGACCTAAAACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAAGACTAAATTTTCTCCCCTCCCTCTTAATGAGGTTTTAGAGACTACACCAGAATAAAAGACAGTTTAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTGAATTATATATTTCAAGAACTAAACAGAGATCCACCTTTCTGGATCTGATTTATATCACTGAAATGTACAGTTCTTTTGGAATAGTTTCACCTGAGAAAACATAGTTGGCTATTATCTATCTTAACCTGTTCAGGCTTTTAAAAAAAACTGTTTTTGCATAGGGTAGTACTAAGATCTTAAAAAGTGGTAACTGTCTTGAAGAAAAAACGTTTATTGTTTGTTTGCAATTGAAATAACAGGGTTACCTTAACAATGACTGTCTATGATGTGTCAGTTCTTATCTGAATTCCAAAATAAACCTGTGCTTAAAAAAGAAATAATTGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTATGTGGTTGATATTTTTCTGTCACAATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAGCCTATTAATTAATTATTGTTTTAATAAAACAAACATTGGTATTGGAAGATAAATATGTTTATGTGGTATCTGACAATGTGTATTAGGTGTCATATACAATGGTAATATGCCTGTCTTTAAAGTGTTATTTTATTAATTAAAAGGATATGGCTATTATTATATATTCTCTAAAGATTTGAGTCCTAAATGCTTTCATCAGGTAAATAAAATGTATAATACAAA