Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL30
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L30
Also known as L28MT|L30MT|MRP-L28|MRP-L30|MRPL28|MRPL28M|RPML28
Coordinate chr2:99181184-99199561
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. Alternative splicing results in multiple transcript variants. Pseudogenes corresponding to this gene are found on chromosomes 6p and 12p. Read-through transcription also exists between this gene and the neighboring upstream lipoyltransferase 1 (LIPT1) gene. [provided by RefSeq, Mar 2011]

Retrocopy(s) from MRPL30

Retroname Coord Strand Genomic Region ENSG
MRPL30P2 chr12:31477547-31478068 + Intragenic
ENSG00000256159 UCSC
MRPL30P1 chr6:57029447-57031711 + Intergenic
ENSG00000276576 UCSC

Expression

Transcript Sequences

>NM_145212.4
GTAGTTCTTCCTCTGCTCTGCTTCCCTTCGGAGGAAAATTTCAGGCTGAAGGTTTAGCGGGTGCCGCCTCTAAAGAGAGCAATCACTACACTTATGGCTGGGATTTTGCGCTTAGTAGTTCAATGGCCCCCAGGCAGACTACAGACTGTGACAAAAGGTGTGGAGTCTCTTATTTGTACAGATTGGATTCGTCACAAATTCACCAGATCAAGAATTCCAGAAAAAGTGTTTCAGGCCTCACCTGAAGATCATGAAAAATACGGTGGGGATCCACAGAACCCTCATAAACTGCATATTGTTACCAGAATAAAAAGTACAAGAAGACGTCCATATTGGGAAAAAGATATAATAAAGATGCTTGGATTAGAAAAAGCACATACCCCTCAAGTTCACAAGAATATCCCTTCAGTGAATGCAAAATTGAAAGTAGTTAAGCATTTGATAAGAATCAAGCCCTTGAAGTTGCCACAAGGACTTCCAGCAGAGGAGAACATGTCTAACACGTGCCTCAAAAGCACTGGGGAGTTAGTAGTGCAGTGGCATCTGAAACCTGTGGAGCAGAAAGCACATGAGTCCTAATGCCCCAGCAGCTTCCGATTGGAAAATGCAAATTGTTTTTATTTAAAGATGGTGAGAAAGTGTTTTCATTAAAATATGTTTTCAAAACCATTTTCAggccgggcacggtggctcacctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaagagttcgagaccagcctgaccaacatggagaaacccccatctctactgaaaatacagaattagccaggcatggtggcacatgcctgtaacccagctactcgggaggctgaagcaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagatggtgccactgtactccagcctgggtgataggatgagactccatctcaggggaaaaaaaaaaaTTTTTTTTTCACTGACTAAACCTGCTGCAGCTCTCTTTTACTACAGACTTGGAGATTTTAGTTTAATTTGGTTTAATTCTCTGTCCTTTCCCTTTCACTGTTTCACTCCAAAACATGTAAGAATGGCAATGTTTGAACATCTGCGTTTGGGTCTACTGCCACCTTAGCAAGCCTCATTAACCATTTTATAAAAATTGCGTTAGTATTGTTGTTGTTGtttttgagacagggtcttgctctgtcacccaagctggaatacagtggcatgatttcagttcactgcagcctcgacctcccaggctcaagtgatcctcccacctcagcctccagagtagctaggactacaggcagtgtgccaccacatccagctaattttttaaagttttttcatagagacagggactcactatgttgtccaagctggtctcaaactcctgggttcaagccatcctcccacctcagcctcccaaaatgctgggattacaggcatgagccactgtacccagccAAAATTGTTTTCTTTTTTAAGTGAattcaacaatttctgtgagtggctctttgcatgaacactgtgcaaggtgttggagaaatccaaagctgaccaaaacatggtccccaccttttggagcttacagtctgttctggggaacagagattcagccaaaGTCAAGAAACACTGGATGCCAGCTAGATTATCTGTTCTGTGCTTTGGTGTCTATAAGTACATATGTGGATATGGGTTCATTTTATCCCTAAACTTAGTACCAAACCAGCATTTAATATCTAATTATAAATCTAATTTGGCCTAAACTTTATTATTGCACACTGCCTGAACAAAACCTATTTGTCTCTATGTAAATTTTTTCCTCATGGAACAAGGGTGTGAAATGAAAATATTTTAGGATTTATTCAAAAACAGACTATTCTGTTTTCAGCTTCAGAATTGTTCTTTGAATCCTAAGGAACCTCTGTCAACAGTTGAGGTTGCTGTTGAAAAGAAAGAAGAAGGAGGCGGAAATCTCTCAGGGAGAATTATTTCCTTTCTTTTCTATTTTAGATACCTGGAGGGGTGGGGAGAAGTAAGAATTGTAAGGGAGGTTCAGTAGTGGGGAATTCTGTGACAGCTGATTGAAGATGATGATGAAGAACCTCTGCATTCTAGTTACCCTTTGCTTCCCTTCACCTCTTGTAAAATTTGGCTTGGCAACAATGACATTGTCATGCTTATTGTCCCAATATCCATCCTGTCGTAGATCTTAATGTTTTTGATCGTTGCGTTAAAGTGGAAGTGCCACCCACAGTGAAACCAGATCCCATTAATAAATAAGCTTAAAGGCAACTGCAGTTTTAATTCCATAGTTATTGAATATCCAGTGTGTGTAAGGCCTGGAGGGGAGCCAAAGGACACTAACTTCTAAGAGCTCCGTCTAGTTGGAGAGAAACCTGTGTGCCACAACATACAGTGTCCTTGCTTATGTGGGGTCGAAGACATCTGTGAAAATAAAAGCAGCCTCTGCTAATTTAGCGCCATCTCTTTTACTGTGCTAAtttttttttctttagagacagggtctcactctgtcgcccagcctggagggcagtggtgtgatcgtagctcactattacctccaactcttgggctcaagtgatcctcccacctcagcctcctgagcagctaggactacagatacatgccaccgctcccggctagtattttttaaaattttttgtagagccaagtgttgctatgttgtccacactgatctggagcttctaatctcaaatgattctcctgcctcagcctcccaaagtgctgggaatacaggtgtgagccaccatacctggccTTACTGTACTAATATTAATATTGTGTAAATAGGGGAAAATACCATGGTTAATTTTTACTCAAACAGTAAGAAAGTTTGAGTAACTAATTTTAATCTCAACAGCCCATAGCTAGAAGAGGGGATCTAAATGTTAAGTTGAATATTTAGAAATAAAAGTGTCTACAAGAAGAAAAGTCTTTAGTGAAAATATGGGCATAGGCCAGCAgcattagctttctattgctgcagaacaaattaccacaaacttagctgcttaaaacaacacacacttattgtctcacaatgtttgtgggtcggaagtctaggcgtggcttagctgggtagtctgtttaggatctcagtgctggaaaaacgtgtctggccaggtgctcattgtagctttgacagggaagggatctgctcccaagcactctcaggttgttggcagaatttgtttccttatggctgtaggattCATGGCAAGTTGCTTCTTCCAAAACCAGCATTGGAGACAGACTAGCAAGATGGGCACTACACTCTTAGATAATCAAATAAATGCAATCATGTGCCTCGTGtcaccttttttgcattccattcattaagaacaagttgcagttcctacctacactcaaggaagggaggaattacacagaagtgtgaccacaggaggcagggctcatggaggcctccttaaagTCCCCCAGCCAAACCTGAAAAGTCAATCCTGGACCTTATCATAGTGGCTGTATAGTTTAGAAGGTTTCTTCAGATTGGCATTCCTTTGCCTCATATCATCACTTCAAAACCCTATAAGGGTTTGTTCCTCGGTCTTGACTTTGTGTCTTTGAGGATTGCTTTGTTTAGTGTCACCTGCCTTCTTTCAGGAGGTTTTGCCTGACATCTGGTGGTGACCGTGGCCACCAAGTCAACCCAAACACTACCTTTAAGGACGACTGCAGTTCTCTTAGGGTCTCCTCAATCTAAAATTGTACCTCTTTCAGGCCAAACACCTATTTTCTTCATTTTTTTTTTCTCATAAGAATGCTAGCTAGTATGCCTATTATCTAACTGGCACAGTTTCACCAAGGACAGTTTGGAACTACACAGGCCATTTTAGGGAGATTTTGACATGAACAAGATTGCTTCTTTGGGAGGTACCTTAAAATGAAAAGCAAAGAAACTTCCATGCGGAGATTGTCTTGTTTTTCTCAAAATGGGATAATTTTGCTTAACATAAGTAGTATCCCTTCCTTCCTTTCCATACTTTGAGAATTAATAAGGACTAGCTTTTTGATCACACAGCTTGATAAAATTTTCAAGGGTCCAAATTACTGTCTAAACCATTTGCCACTCTTTGTGTATATTTGTCAAAATCTGCTTTTCTATATCAAAACTTTTCTCTCAAGACCTGAGGGAATTAATTAATAAGGAATCCTTGGAACACTGGAAATTCTAAAATAAGAGTCAGATACAAAACACTGGTCACTAAAATTCTTACCTTTATGTATTAGAATGGCAATCAATGAACAAACTGAAAATGTCTTTGGATATTATTTCTGTTTATTTTTTGCCTCAAAATTATTAAATGACATGAAATAAGTGCTCAAGAAGAAAAATAAACAATTCTTCATTTCCTGTT