Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name CHMP5
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name charged multivesicular body protein 5
Also known as C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60
Coordinate chr9:33265049-33282070
Strand +
Gene summary CHMP5 belongs to the chromatin-modifying protein/charged multivesicular body protein (CHMP) family. These proteins are components of ESCRT-III (endosomal sorting complex required for transport III), a complex involved in degradation of surface receptor proteins and formation of endocytic multivesicular bodies (MVBs). Some CHMPs have both nuclear and cytoplasmic/vesicular distributions, and one such CHMP, CHMP1A (MIM 164010), is required for both MVB formation and regulation of cell cycle progression (Tsang et al., 2006 [PubMed 16730941]).[supplied by OMIM, Mar 2008]

Retrocopy(s) from CHMP5

Retroname Coord Strand Genomic Region ENSG
CHMP5P2 chr1:203805431-203806269 - Intragenic
 ENSG00000227417 UCSC
CHMP5P1 chrX:46724151-46725848 - Intragenic
 ENSG00000215284 UCSC

Expression

Transcript Sequences

>NM_016410.6
AGTGTTTGGGTTTCTTCGCGGCTGCTCAAGATGAACCGACTCTTCGGGAAAGCGAAACCCAAGGCTCCGCCGCCCAGCCTGACTGACTGCATTGGCACGGTGGACAGTAGAGCAGAATCCATTGACAAGAAGATTTCTCGATTGGATGCTGAGCTAGTGAAGTATAAGGATCAGATCAAGAAGATGAGAGAGGGTCCTGCAAAGAATATGGTCAAGCAGAAAGCCTTGCGAGTTTTAAAGCAAAAGAGGATGTATGAGCAGCAGCGGGACAATCTTGCCCAACAGTCATTCAACATGGAACAAGCCAATTATACCATCCAGTCTTTGAAGGACACCAAGACCACGGTTGATGCTATGAAACTGGGAGTAAAGGAAATGAAGAAGGCATACAAGCAAGTGAAGATCGACCAGATTGAGGATTTACAAGACCAGCTAGAGGATATGATGGAAGATGCAAATGAAATCCAAGAAGCACTGAGTCGCAGTTATGGCACCCCAGAACTGGATGAAGATGATTTAGAAGCAGAGTTGGATGCACTAGGTGATGAGCTTCTGGCTGATGAAGACAGTTCTTATTTGGATGAGGCAGCATCTGCACCTGCAATTCCAGAAGGTGTTCCCACTGATACAAAAAACAAGGATGGAGTTCTGGTGGATGAATTTGGATTGCCACAGATCCCTGCTTCATAGATTTGCATCATTCAAGCATATCTTGTAAAACAAACACATATTATGGGACTAGGAAATATTTATCTTTCCAAATTTGCCATAACAGATTTAGGTTTCTTTCCTTTCTTTGAAGGAAAGTTTAATTACATTGCTCTTTTATTTTTTCCATTAAGAGACTCATTGCTTGGGAAATGCTTTCTTCGTACTAAAATTTGATTCCTTTTTTTCTTATGAAAAACGAACTCAGTTTAAAAGTATTTTTAGCTCGTATGACTTGTTTTCATTCATTAATAATAATTTGAAATAAAACTAAGGAAATGGAATCTTAAAAGTCTATGACAGTGTAACTCTACAGTCTCAAAATGACCTGATAAATTGATAAGACAAAGATGAGATTATTGGGGCTGTTCATATTATGATTCAGAATCATTTTCTATTGTGGTATTATAGGTTGGTTAAAGTGATGGCCTTTTTGATGGGTTTTGTTGTGTCTTGTGAACAAGTCGTTACTGTGTCCATTATTGGAATGGAATTATCACTACTGTATCATGAGTGGGTATTTTGATTCTATGGTTCCCTCAGTATTACATCTTGACTTGTAATCAATTATGAATATTTCTTGATATTTAATGTATAGGACATTTATTTATACTCAATAAATATTTTTCAAAAGGATATAATTTTAATAATATCACTTCAGCTTAAAACCTCTACTGCGGAAACCAAATTTAATAGAATTTTAATGTCATTTCAGCCTATAACTCCACTACAGAAACCAAATTAACCAGTAGCATTGTGAGGAAAgagcaaggaacaatctgggcttgggccctgggtctaccatttactaactactgagtagtctattcaacctctctaaccttctgtttccttattagtaaaatcatgcttaactcacagagcttttgtgaggaataattgaggtaatggtcataagtaccttgttaactgcaaggggctattcttatatgagggattgttaACAATAAAAAAGAAACTGCTTCATTCTTTTCTTGGAAGGTGCCTGGAGTACTACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTGCCTCACAGTGCTATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAGGAACACCA