Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ZFR
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name zinc finger RNA binding protein
Also known as SPG71|ZFR1
Coordinate chr5:32354350-32444740
Strand -
Gene summary This gene encodes an RNA-binding protein characterized by its DZF (domain associated with zinc fingers) domain. The encoded protein may play a role in the nucleocytoplasmic shuttling of another RNA-binding protein, Staufen homolog 2, in neurons. Expression of this gene is regulated through alternative polyadenylation that mediates differential microRNA targeting. Elevated expression of this gene has been observed in human patients with pancreatic cancer and knockdown of this gene may result in reduced viability and invasion of pancreatic cancer cells. [provided by RefSeq, Sep 2016]

Retrocopy(s) from ZFR

Retroname Coord Strand Genomic Region ENSG
ZFRP2 chr10:89139059-89140761 + Intergenic
ENSG00000233292 UCSC
ZFRP1 chrX:62878660-62883706 - Intergenic
ENSG00000234570 UCSC

Expression

Transcript Sequences

>NM_016107.5
CTGTTCTCCGCTGAGGAGGAGCGGGGCAGAGGAGGGAGGCAGCGGGTGAGAGTTCAGAGTTCAGCAGCAGCAGCCCGAGCCCATGATTCCCATATGCCCTGTAGTTTCTTTCACCTATGTGCCCAGCCGGCTGGGGGAAGATGCCAAAATGGCGACCGGCAACTACTTTGGATTCACCCACAgcggggcggcggcggcggcggctgcggcCCAATATAGCCAGCAGCCAGCTTCGGGTGTAGCCTATTCTCATCCAACTACAGTTGCTAGCTACACTGTCCATCAGGCTCCAGTAGCTGCTCACACAGTTACTGCTGCCTATGCACCAGCAGCCGCCACAGTTGCAGTTGCCAGGCctgctccagtagctgttgcagctgctgcaacagctgctgctTATGGAGGCTACCCCACTGCACACACAGCAACTGACTATGGTTATACTCAGAGGCAACAAGAAGcaccaccaccaccacccccagctactacacaaaactaccaGGATTCATACTCATATGTAAGGTCCACAGCTCCTGCTGTAGCTTATGATAGTAAGCAATACTACCAACAACCAACAGCAActgctgctgctgtagctgccgctgcCCAACCTCAGCCTTCTGTTGCTGAAACTTACTATCAGACAGCCCCCAAAGCAGGTTACAGCCAAGGTGCAACTCAGTATACTCAAGCCCAGCAAACTCGACAAGTGACAGCCATAAAACCAGCCACACCAAGTCCAGCTACCACTACTTTCTCCATCTATCCTGTATCCTCCACCGTACAGCCAGTAGCAGCTGCGGCTACTGTGGTGCCATCCTATACTCAGAGTGCTACTTACAGTACCACAGCAGTTACATATTCTGGTACGTCTTATTCAGGTTATGAAGCAGCAGTGTATTCAGCTGCATCTTCCTACTATcaacagcagcagcagcaacagaagcaggcagcagcagcagctgctgctgctgctgcaacagctgcCTGGACAGGGACCACCTTTACTAAAAAAGCACCATTCCAAAATAAACAACTGAAACCAAAACAGCCTCCCAAACCACCACAGATTCACTATTGTGATGTTTGTAAGATCAGCTGTGCTGGACCACAGACTTATAAAGAACATTTAGAAGGACAGAAACATAAAAAAAAAGAAGCTGCATTGAAAGCCTCACAAAATACCAGCAGCAGCAACAGTTCTACTCGTGGGACTCAAAATCAGCTACGTTGTGAGCTCTGCGATGTGTCTTGTACAGGAGCAGATGCGTATGCTGCCCACATTCGTGGTGCTAAGCATCAGAAAGTGGTTAAGTTACACACAAAACTTGGTAAACCCATTCCATCAACAGAACCAAATGTTGTTAGCCAAGCTACTTCTTCAACAGCTGTATCTGCTTCAAAGCCGACTGCCTCTCCTTCAAGCATTGCAGCAAACAATTGTACTGTGAATACGTCATCAGTTGCAACGTCTTCAATGAAGGGTCTTACGACTACAGGAAACTCGTCTCTTAATAGCACATCTAACACTAAAGTATCAGCAGTGCCTACAAATATGGCTGCCAAGAAAACATCTACCCCCAAAATAAATTTTGTTGGTGGTAATAAGCTGCAGTCAACAGGAAATAAAGCAGAAGACATAAAAGGAACCGAATGTGTTAAAAGTACTCCTGTCACTTCTGCTGTGCAGATTCCTGAAGTAAAGCAAGACACAGTGTCAGAACCAGTCACACCTGCATCTCTTGCTGCTTTACAGAGTGATGTGCAGCCAGTGGGCCATGATTATGTGGAAGAGGTACGAAATGATGAAGGAAAAGTAATTCGGTTCCATTGTAAATTATGCGAGTGCAGCTTTAATGATCCCAATGCTAAGGAGATGCACTTAAAAGGGCGAAGACACAGACTTCAATATAAAAAAAAAGTAAATCCAGATTTGCAAGTAGAAGTAAAGCCTAGTATTCGAGCAAGAAAGATTCaagaagagaaaatgaggaagcaaatgcagaaggaggagtactggcgaagacgagaagaagaggaGCGTTGGAGAATGGAAATGAGACGTTATGAAGAGGACATGTACTGGAGGAGAATGGAGGAAGAACAACATCATTGGGATGATCGCCGCCGAATGCCAGATGGAGGTTATCCTCATGGTCCTCCAGGCCCATTAGGCCTTCTGGGAGTCCGACCAGGCATGCCTCCTCAGCCTCAGGGGCCTGCACCCTTACGTCGTCCTGACTCATCTGATGACCGTTATGTAATGACAAAACATGCCACCATTTATCCAACTGAAGAGGAGTTACAGGCAGTTCAGAAAATTGTTTCTATTACTGAACGTGCTTTAAAACTCGTTTCAGACAGTTTGTCTGAACATGAGAAGAACAAGAACAAAGAGGGAGATGATAAGAAAGAGGGAGGTAAAGACAGAGCTTTGAAAGGAGTTTTGCGAGTGGGAGTATTGGCAAAAGGATTACTTCTCCGAGGAGATAGAAATGTCAACCTTGTTTTGCTGTGCTCAGAGAAACCTTCAAAGACATTATTAAGCCGTATTGCAGAAAACCTACCCAAACAGCTTGCTGTTATAAGCCCTGAGAAGTATGACATAAAATGTGCTGTATCTGAAGCGGCAATAATTTTGAATTCATGTGTGGAACCCAAAATGCAAGTCACTATCACACTGACATCTCCAATTATTCGAGAAGAGAACATGAGGGAAGGAGATGTAACCTCGGGTATGGTGAAAGACCCACCGGACGTCTTGGACAGGCAAAAATGCCTTGACGCTCTGGCTGCTCTACGCCACGCTAAGTGGTTCCAGGCTAGAGCTAATGGTCTGCAGTCCTGTGTGATTATCATACGCATTCTTCGAGACCTCTGTCAGCGAGTTCCAACTTGGTCTGATTTTCCAAGCTGGGCTATGGAGTTACTAGTAGAGAAAGCAATCAGCAGTGCTTCTAGCCCTCAGAGCCCTGGGGATGCACTGAGAAGAGTTTTTGAATGCATTTCTTCAGGGATTATTCTTAAAGGTAGTCCTGGACTTCTGGATCCTTGTGAAAAGGATCCCTTTGATACCTTGGCAACAATGACTGACCAGCAGCGTGAAGACATCACATCCAGTGCACAGTTTGCATTGAGACTCCTTGCATTCCGCCAGATACACAAAGTTCTAGGCATGGATCCATTACCGCAAATGAGCCAACGTTTTAACATCCACAACAACAGGAAACGAAGAAGAGATAGTGATGGAGTTGATGGATTTGAAGCTGAGGGGAAAAAAGACAAAAAAGATTATGATAACTTTTAAAAAGTGTCTGTAAATCTTCAGTGTTAAAAAAACAGATGCCCATTTGTTGGCTGTTTTTCATTCATAATAATGTCTACATTGAAAAATTTATCAAGAATTTAAAGGATTTCATGGAAGAACCAAGTTTTTCTATGATATTAAAAAATGTACAGTGTTAGGTATTATTTGAATGGAAAGACACCCAAAAAAAAAAATGTGCTCCGACTAGGGGGAAAACAGTAGTTCCGATTTTTTCCCATTATTTTTATTTTATTTTCTGGTTGCCCTAGCTTCCCCCCCTATTTTTGTGTCTTTTATTAACTAGTGCATTGTCTTATTAAATCTTCACTGTATTTAATGCAGGATGTGTGCTTCAGTTGCTCTGTGTATTTTGATATTTTAATTTAGAGGTTTTGTTTGCTTTTTGACACTAGTTGTAAGTTACTTTGTTATAGATGGTATCCTTTACCCCTTCTTAATATTTTACAGCAGTACGTTTTTTTGTAACGTGAGACTGCAGAGTTTGTTTTTCTATATGTGAAGGATTACAACACAAAAAGTTATCCTGCCATTCGAGTGCTCAGAACTGAATGTTTCTGCAGATCTTGTGGCATTTGTCTCTAGTGTGATATATAAAGGTGTAATTAAGACAGAGTTCTGTTAATCTAATCAAGTTTGCTGTTAGTTGTGCATTAGCAGTATAAAAGCTAATATATACTATATGGTCTTGCAACAGTTTTAAAGCCTCTGCATAATTGATAATAAAAATGCATGACATTCTTGTTTTTAATAGACTTTTAAAATCATAATTTTAGGTTTAACACGTAGATCTTTGTACAGTTGACTTTTTGACATAGCAAGGCCAAAAATAACTTTCTGAATATTTTTTTCTTGTGTATAAGTGGAAAGGGCATTTTTCACATATAAGTGGGCTAACCAATATTTTCAAAAGAACTTCATCATTGTACAACTAACAACAGTAACTAGCCCTTAATTATGGTGACAGTTCCTTATTGGTGTGTGTGAGATTACTCTAGCAACTATTACAGTATAACACAGATGATCTTCTCCACACACCCCATCACCCAGATAATTTACAGTTCTGTTAACAGTGAGGTTGATAAAGTATTACTGATAAAAAATTATCTAAGGAAAAAAACAGAAAATTATTTGGTGTGGCCATCTTACCTGCTTATGTCTCCTACACAAAGCTAAATATTCTAGCAGTGATGTAATGAAAAATTACATCTTACTGTTGATATATGTATGCTCTGGTACACAGATGTCATTTTGTTGTCACAGCACTACAGTGAAATACACAAAAAATGAAATTCATATAATGACTTAAATGTATTATATGTTAGAATTGACAACATAAACTACTTTTGCTTTGAAATGATGTATGCTTCAGTAAAATCATATTCAAATTTA