Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PGAM1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name phosphoglycerate mutase 1
Also known as HEL-S-35|PGAM-B|PGAMA
Coordinate chr10:97426191-97433444
Strand +
Gene summary The protein encoded by this gene is a mutase that catalyzes the reversible reaction of 3-phosphoglycerate (3-PGA) to 2-phosphoglycerate (2-PGA) in the glycolytic pathway. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]

Retrocopy(s) from PGAM1

Retroname Coord Strand Genomic Region ENSG
PGAM1P8 chr11:65174130-65175491 - Intergenic
ENSG00000255200 UCSC
PGAM4P1 chrX:54672045-54672838 + Intergenic
ENSG00000215197 UCSC
PGAM1P9 chr11:92365578-92367252 - Intragenic
ENSG00000249255 UCSC
PGAM1P15 chr12:104030728-104032466 + Intragenic
ENSG00000216285 UCSC
PGAM1P14 chr12:93639902-93641616 - Intergenic
ENSG00000186076 UCSC
PGAM1P5 chr12:95672288-95673991 + Intragenic
Intragenic
ENSG00000257150 UCSC
PGAM1P12 chr15:96440621-96442365 - Intergenic
ENSG00000250825 UCSC
PGAM1P6 chr2:23872267-23873030 - Intragenic
ENSG00000224464 UCSC
PGAM1P3 chr3:40322738-40323258 - Intergenic
ENSG00000230274 UCSC
PGAM1P4 chr3:9348393-9350066 + Intragenic
Intragenic
ENSG00000214041 UCSC
PGAM4P2 chr4:115764323-115764567 - Intergenic
ENSG00000248488 UCSC
PGAM1P1 chr5:58161324-58161752 + Intergenic
ENSG00000248271 UCSC
PGAM1P10 chr6:73055085-73056764 + Intragenic
ENSG00000220515 UCSC
PGAM1P13 chr8:107647549-107648041 + Intergenic
ENSG00000248838 UCSC
PGAM1P2 chr9:35942323-35943953 - Intergenic
ENSG00000225639 UCSC
PGAM1P7 chrX:46645635-46647330 - Intragenic
ENSG00000213997 UCSC
PGAM4 chrX:77967960-77969650 - Intergenic
ENSG00000226784 UCSC

Expression

Transcript Sequences

>NM_001317079.2
ATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGCCTCAGATTGCTCTCCTAGCTTCTTGCCTTCACTGTACCATCCTTCTCAAATGAAGCAAAACGCAGGACAGTCTGATGCTGGCTATGAGTTTGACATCTGCTTCACCTCAGTGCAGAAGAGAGCGATCCGGACCCTCTGGACAGTGCTAGATGCCATTGATCAGATGTGGCTGCCAGTGGTGAGGACTTGGCGCCTCAATGAGCGGCACTATGGGGGTCTAACCGGTCTCAATAAAGCAGAAACTGCTGCAAAGCATGGTGAGGCCCAGGTGAAGATCTGGAGGCGCTCCTATGATGTCCCACCACCTCCGATGGAGCCCGACCATCCTTTCTACAGCAACATCAGTAAGGATCGCAGGTATGCAGACCTCACAGAAGATCAGCTACCCTCCTGTGAGAGTCTGAAGGATACTATTGCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTTCCCCAGATCAAGGAGGGGAAACGTGTACTGATTGCAGCCCATGGCAACAGCCTCCGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAACCTGCCGACTGGTATTCCCATTGTCTATGAATTGGACAAGAACTTGAAGCCTATCAAGCCCATGCAGTTTCTGGGGGATGAAGAGACGGTGCGCAAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAGTGAAGGCCGGCGGGGAGGATACTGTCCCCAGGAGCACCCTCCCTGCCCGTCTTGTCCCTCTGCCCCTCCCACCTGCACATGTCACACTGACCACATCTGTAGACATCTTGAGTTGTAGCTGCAGACGGGGACCAGTGGCTCCCATTTTCATTTTAGCCATTTTGTCGCCTGCACCCACTCCCTTCATACAATCTAGTCAGAATAGCAGTTCTAGAGCACAGGTTCTCAGTCTAAGCTATGGAAAAGCTCCCCTTATCCAACAGAGTTTAAAAGTAGTGACTTGGGTTTTTGCGAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCTAAGCCATGACCAGTGAGGAGAAGCAACAGAGCCTGTCTGTCCCCATGAGCGGAGTCTGTCCTCTGCTCTTCTGCAGTCAGGTCACTGCCTACTGCCTGGGGGCTCTAGTCATTCCAGTGGAAGACGAATGTAACCTGCGTGGTGATGTGACAACTGTTTCCTCCCTGACCCCAGAGGATCTGGCTCTAGGTTGGGATCAATCCTGAATTTCGTTATGTGTTAATTTACTTTTATTAAAAAAGTATAGTATATATAATACAAAACAATAACCCTTCTGGGGTTTCTTGTGGCGGTTGAAATAGTCCCACATGTGGTCATCAGAAAATAAGCCATTCCTCATACCAATATAGGATCAGCTCCTTGACCTCTGAGGGGCAGGAGTGCTTCCTGGTGTGTGTATTAGAATCCCTTCCTGCCTTGTTTCATGGCAGTGAAATGCCTCTTGGTCCTGTCCAAGTGTATCTTTCACTGATTTCTGAATCATGTTCTAGTTGCTTGACCCTGCCACATGGGTCCAGTGTTCATCTGAGCATAACTGTACTAAATCCTTTTTCCATATCAGTATAATAAAGGAGTGATGTGCAATAGCT
>NM_002629.4
GAGAACTTGCGCGGGAGCCGGACTGAGCGGTGCGAGCGCGCAGGCGCGGCCGACGGGGCGGGCTGCTACTCCGGAATCTGCTAATCCCAGTCGGTGCCGCATCCCCAGCCCGCCGCCATGGCCGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGACGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGATGCTGGCTATGAGTTTGACATCTGCTTCACCTCAGTGCAGAAGAGAGCGATCCGGACCCTCTGGACAGTGCTAGATGCCATTGATCAGATGTGGCTGCCAGTGGTGAGGACTTGGCGCCTCAATGAGCGGCACTATGGGGGTCTAACCGGTCTCAATAAAGCAGAAACTGCTGCAAAGCATGGTGAGGCCCAGGTGAAGATCTGGAGGCGCTCCTATGATGTCCCACCACCTCCGATGGAGCCCGACCATCCTTTCTACAGCAACATCAGTAAGGATCGCAGGTATGCAGACCTCACAGAAGATCAGCTACCCTCCTGTGAGAGTCTGAAGGATACTATTGCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTTCCCCAGATCAAGGAGGGGAAACGTGTACTGATTGCAGCCCATGGCAACAGCCTCCGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAACCTGCCGACTGGTATTCCCATTGTCTATGAATTGGACAAGAACTTGAAGCCTATCAAGCCCATGCAGTTTCTGGGGGATGAAGAGACGGTGCGCAAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAGTGAAGGCCGGCGGGGAGGATACTGTCCCCAGGAGCACCCTCCCTGCCCGTCTTGTCCCTCTGCCCCTCCCACCTGCACATGTCACACTGACCACATCTGTAGACATCTTGAGTTGTAGCTGCAGACGGGGACCAGTGGCTCCCATTTTCATTTTAGCCATTTTGTCGCCTGCACCCACTCCCTTCATACAATCTAGTCAGAATAGCAGTTCTAGAGCACAGGTTCTCAGTCTAAGCTATGGAAAAGCTCCCCTTATCCAACAGAGTTTAAAAGTAGTGACTTGGGTTTTTGCGAGTGCTTTGTTTACTAAGGACTTTGGGGAGGAACCATGCTAAGCCATGACCAGTGAGGAGAAGCAACAGAGCCTGTCTGTCCCCATGAGCGGAGTCTGTCCTCTGCTCTTCTGCAGTCAGGTCACTGCCTACTGCCTGGGGGCTCTAGTCATTCCAGTGGAAGACGAATGTAACCTGCGTGGTGATGTGACAACTGTTTCCTCCCTGACCCCAGAGGATCTGGCTCTAGGTTGGGATCAATCCTGAATTTCGTTATGTGTTAATTTACTTTTATTAAAAAAGTATAGTATATATAATACAAAACAATAACCCTTCTGGGGTTTCTTGTGGCGGTTGAAATAGTCCCACATGTGGTCATCAGAAAATAAGCCATTCCTCATACCAATATAGGATCAGCTCCTTGACCTCTGAGGGGCAGGAGTGCTTCCTGGTGTGTGTATTAGAATCCCTTCCTGCCTTGTTTCATGGCAGTGAAATGCCTCTTGGTCCTGTCCAAGTGTATCTTTCACTGATTTCTGAATCATGTTCTAGTTGCTTGACCCTGCCACATGGGTCCAGTGTTCATCTGAGCATAACTGTACTAAATCCTTTTTCCATATCAGTATAATAAAGGAGTGATGTGCAATAGCT