Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name STX18
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name syntaxin 18
Also known as Ufe1
Coordinate chr4:4418968-4542343
Strand -
Gene summary This gene encodes a member of the syntaxin family of soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNAREs) which is part of a membrane tethering complex that includes other SNAREs and several peripheral membrane proteins, and is involved in vesicular transport between the endoplasmic reticulum (ER) and the Golgi complex. The encoded protein is important for the organization of the smooth, rough, and exit site ER subdomains. A pseudogene of this gene has been identified. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2016]

Retrocopy(s) from STX18

Retroname Coord Strand Genomic Region ENSG
STX18P1 chr17:30068603-30070231 + Intragenic
 ENSG00000266876 UCSC

Expression

Transcript Sequences

>NM_016930.4
AGTCCTTCAGCGGCCGGGTTCGCGCCGCGGTCGCCGGCTGCTTACGTGGGCGGGCCTAGTGTGGGGCTGAGGGTGCGGGTCGCTATGGCGGTGGACATCACGCTGCTATTCCGGGCCAGCGTCAAGACCGTGAAGACGCGGAACAAGGCGCTGGGAGTGGCGGTGGGCGGCGGGGTCGATGGCAGCCGGGACGAGCTGTTCCGCCGGAGCCCCCGGCCCAAGGGCGACTTCTCCAGCCGGGCCCGCGAAGTGATTTCTCACATTGGCAAACTGAGAGATTTTCTTCTGGAACACAGGAAAGATTATATTAATGCTTATAGccataccaTGTCTGAATATGGGAGGATGACAGACACAGAACGAGACCAGATAGACCAGGATGCCCAGATATTCATGAGGACCTGTTCAGAAGCAATTCAGCAACTACGAACAGAAGCTCACAAGGAGATACATTCCCAGCAAGTGAAGGAGCACAGGACCGCTGTTTTGGATTTCATTGAAGATTACTTGAAAAGAGTATGTAAACTTTACTCAGAACAGAGAGCCATCCGAGTTAAAAGAGTGGTGGATAAGAAAAGATTATCTAAGCTGGAACCAGAACCAAATACAAAGACAAGAGAATCCACATCTTCTGAGAAAGTTTCACAGAGTCCTTCAAAAGACTCTGAAGAAAACCCTGCCACTGAAGAACGTCCAGAAAAAATTTTGGCTGAAACACAACCTGAATTGGGAACGTGGGGAGATGGCAAAGGCGAAGATGAGTTATCCCCAGAAGAAATACAAATGTTTGAACAGGAAAATCAGCGACTAATTGGTGAAATGAACAGCTTGTTTGATGAAGTGAGGCAAATCGAAGGGAGAGTGGTTGAGATTTCCAGACTCCAAGAGATATTCACGGAAAAGGTTTTGCAACAGGAAGCTGAGATTGACAGCATTCACCAGTTAGTTGTGGGGGCAACTGAAAATATCAAGGAAGGCAACGAAGACATAAGAGAGGCCATTAAAAACAACGCTGGCTTCCGCGTGTGGATCCTCTTCTTCCTCGTGATGTGCTCCTTCTCCTTGCTCTTCCTCGACTGGTACGACAGCTAGCCAGGGCCACGGGGGCCCAGCACGAGAGTCCTCATGGGCACTCACAGACTGCGTGCTTTCATGTACTTCCAGTGCTGGAGCATGGTATGACCAGATTTTATCACAGTGCCATTTGAAGGGAAAGGAGTTCAGACAGACAGACGTATTCCCCAAAAAGGGATACCCCAGGCCGATGGTGTTCAGCCATTTAGCAGCTGAAAAAGGAAACAGTGCACACCAATGGGAGGCAGCCTGCGTAGCCCTCATCAGGCAAGACAGACTGAATGCAGGAGTGGGTGATTAGCTGCTCCTTGAACTTGAGGCTGCCTTGGCAGCAGGGGCACAGCAGGCCTCAAGAGCCCCTAATTGTCTCAGGGTTCAAAGGAAGACACTGACCTTTCCCATCCCGGTAGCTTCAGGGAAGATCATAGTTAATAACGTCTCTCAACAAATGATTACTTCTTTGTTTCCTTGTGGCTTCTTGTCTGTCTGAGTCAACGAATACACAGACTTACTGGATTATAGAAGAGAAAATTCACATCTGCCTTGTTAATCTAATAAATATAATTACAGCCCCTTAATGTGTTGTCAATGAGTCTAAGTTGACAAATTCAGTGGCAGCCCAGCCACCTCCTATCAATCAATCAGGGAAGAAATGCAGGGGAGACTGGGGCCCTCAGTGAGGGGCTGCCTGGCATTACTCCTCCAAAGACTGCTGCCCCCAGAACAGGCAGGGGGTGTGGGAGGGCCAGTTTCCCGCCACTGGGTCCAAGGAGCCTTTGTTCAAAGGAAGAAGTGGGCCACGGAAGAACGGGCCTGCTTCTCTCGTGCCTGTGCTTCTGACCTCCAGGAACTGTAAACAGGAACACCTATGTGTAACTGAAGGCATGAGACATCTGTACAGGAAGCATCCCAGCGCCCACATGGGCATGAGACAGTCTGCACTGCGCCTGGTGAAATGCGTGTGTGTACAGACAGTCCACTGGGCAGCACAGGTATCCTCATGTTCTTTATTTGCACAGAGTGAAATGTCAGAAGTTACATGTAAATGAATTCACAGTCAATAAAGTCCACGTCTACCTGGAAA