Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CYCS
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name cytochrome c, somatic
Also known as CYC|HCS|THC4
Coordinate chr7:25118656-25125260
Strand -
Gene summary This gene encodes a small heme protein that functions as a central component of the electron transport chain in mitochondria. The encoded protein associates with the inner membrane of the mitochondrion where it accepts electrons from cytochrome b and transfers them to the cytochrome oxidase complex. This protein is also involved in initiation of apoptosis. Mutations in this gene are associated with autosomal dominant nonsyndromic thrombocytopenia. Numerous processed pseudogenes of this gene are found throughout the human genome.[provided by RefSeq, Jul 2010]

Retrocopy(s) from CYCS

Retroname Coord Strand Genomic Region ENSG
CYCSP29 chr11:108821733-108822663 - Intragenic
ENSG00000255379 UCSC
CYCSP25 chr11:31279258-31281003 - Intragenic
ENSG00000255370 UCSC
CYCSP51 chr1:150903879-150905066 + Intragenic
ENSG00000229357 UCSC
CYCSP52 chr1:157128349-157129548 + Intragenic
ENSG00000235700 UCSC
CYCSP26 chr11:58005377-58005903 + Intergenic
ENSG00000254601 UCSC
CYCSP53 chr1:171443848-171444839 - Intergenic
ENSG00000234333 UCSC
CYCSP27 chr11:74482188-74483740 + Intergenic
ENSG00000255444 UCSC
CYCSP28 chr11:83328900-83329825 + Intergenic
ENSG00000255003 UCSC
CYCSP4 chr1:202369021-202369802 - Intragenic
ENSG00000229120 UCSC
CYCSP30 chr12:87750143-87753470 + Intergenic
ENSG00000257648 UCSC
CYCSP32 chr13:19457778-19458779 - Intragenic
ENSG00000223625 UCSC
CYCSP33 chr13:24400717-24401635 + Intergenic
ENSG00000233545 UCSC
CYCSP34 chr13:40862987-40863934 - Intergenic
ENSG00000176268 UCSC
CYCSP35 chr13:98629164-98629947 - Intergenic
ENSG00000233549 UCSC
CYCSP1 chr14:76633645-76636260 + Intergenic
ENSG00000271423 UCSC
CYCSP2 chr15:41108908-41109172 + Intragenic
ENSG00000259547 UCSC
CYCSP38 chr15:60558067-60558918 + Intergenic
ENSG00000259513 UCSC
CYCSP39 chr16:25453469-25454716 - Intergenic
ENSG00000260690 UCSC
CYCSP40 chr17:77199325-77199575 - Intragenic
ENSG00000262870 UCSC
CYCSP7 chr2:100369360-100370572 - Intergenic
ENSG00000269383 UCSC
CYCSP41 chr21:10576228-10576421 + Intragenic
ENSG00000278678 UCSC
CYCSP6 chr2:78411902-78413110 - Intergenic
ENSG00000214429 UCSC
CYCSP12 chr3:11877609-11879146 - Intergenic
ENSG00000224263 UCSC
CYCSP56 chr3:167956133-167956624 - Intergenic
ENSG00000242036 UCSC
CYCSP10 chr3:9999631-10000972 - Intragenic
ENSG00000232901 UCSC
CYCSP55 chr6:34219371-34220937 + Intergenic
ENSG00000214810 UCSC
CYCSP17 chr6:95504171-95505332 + Intergenic
ENSG00000219627 UCSC
CYCSP19 chr7:121398436-121399508 + Intergenic
ENSG00000213310 UCSC
CYCSP20 chr7:129117418-129117855 - Intergenic
ENSG00000240416 UCSC
CYCSP23 chr8:119617994-119618499 - Intragenic
ENSG00000253495 UCSC
CYCSP57 chr8:33968693-33969947 - Intergenic
ENSG00000188512 UCSC
CYCSP22 chr8:50761613-50762818 - Intragenic
ENSG00000254358 UCSC
CYCSP24 chr9:94037963-94039218 + Intergenic
ENSG00000227666 UCSC
CYCSP45 chrX:153841182-153842092 + Intergenic
ENSG00000184844 UCSC
CYCSP43 chrX:69485328-69485680 - Intergenic
ENSG00000231706 UCSC
CYCSP46 chrY:14940688-14941748 - Intergenic
ENSG00000227949 UCSC
CYCSP48 chrY:26400984-26401734 + Intergenic
ENSG00000233843 UCSC

Expression

Transcript Sequences

>NM_018947.6
AGAGAGTGGGGACGTCCGGCTTCGGAGCGGGAGTGTTCGTTGTGCCAGCGACTAAAAAGAGAATTAAATATGGGTGATGTTGAGAAAGGCAAGAAGATTTTTATTATGAAGTGTTCCCAGTGCCACACCGTTGAAAAGGGAGGCAAGCACAAGACTGGGCCAAATCTCCATGGTCTCTTTGGGCGGAAGACAGGTCAGGCCCCTGGATACTCTTACACAGCCGCCAATAAGAACAAAGGCATCATCTGGGGAGAGGATACACTGATGGAGTATTTGGAGAATCCCAAGAAGTACATCCCTGGAACAAAAATGATCTTTGTCGGCATTAAGAAGAAGGAAGAAAGGGCAGACTTAATAGCTTATCTCAAAAAAGCTACTAATGAGTAATAATTGGCCACTGCCTTATTTATTACAAAACAGAAATGTCTCATGACTTTTTTATGTGTACCATCCTTTAATAGATCTCATACACCAGAATTCAGATCATGAATGACTGACAGAATATTTTGTTGGGCAGTCCTGATTTAAAACTAAGACTGGCTTGTGGTTAAATGAATATGTTCAGTTTTTGAATTTTAATAGTAACTCCAATTCAGTAAATGGTATCACTGTTTACCCCTTTTAAAGATATGATTAGACTTCGTTAGTAATGTTCAACTTTTCACAAAGATGGTGAGTGCCATCTTAAAACTTACTGGAGATTGGTTTTATATTTAGATTTATATAACTGGTTATGTGAATATATTTAAATACTGGGGAAATTGCTTCACTGTCTTAGAACCAAGCAAGATTCACCTGTGTTTTGTGTTCATGTTCATTTGCCTCTTAAAGGCAAGGGTTGAAGATAAATAAGGTAGCAATGTCTATAGTTTTGGCCTTAACTATGCCAATCTAATTATAATTCCCTGTATTTAAAATGGTTTCTTTTACTTATTGAAAGGCATTTTAGTGTGGTTTATGTGTAATATTAAAGATTATTCAACACCTCTCACATCTTACAGATCTATAAGGTCACATGCTTTTAAAATAGTAGCAAGTTAAACTTCACTCTTGAATTCTTTACAATCTAAGTCAAACTAAGTTATAATTTAGGATTGTCTTTAAACAGCCATTCAGAAACAAAACTGTAGAACTGTGTATTTGATTGGGAATGGTGCTTTTGCCAACTTAAAAGGATTAAAGTAACGGAGATATACACAAATTTTAAAATTATGTGTGATCACAAGACTAAAGATAATTAAAAAGAAAACCACAGATCATGACTTTTTGACTGTGCTTGATTTCATGACTGATGCACAAATTTTAATGATTAAAAAGTGCAGGAGCCCTAAATGTCAGTGCAGCAGCCCTAAATGTCAGTGCAGCAGTGTTAACCAGTCATGGTGCTAGATTGTTTACTTGGTTTTCTAGGACTGCCTCAACTAGAATAACACTTCACTAATTGACTCTTAGTTTCTTTGCTCAGATTGAGAACTGCAGCATTTATGCCAGACATGGACAGAGGAATGCCTGTGGTCATAGTTTTGTGATGTGTAACAGTGTATAATTACATACTGAATTATTTCATGCATAGTCTGTGCCATACACATTTAGAGTAGTCCTTGGAGATTTTATGGAGATGGTGAGCACAAGGTAAGTCATAAAGAATAATGAGAAAATAAATCTATGCTGGTGCAGCTGAGAACTGTATCTTTGTGGGACAGTGAGAAGACTGAGAAGATGTGAATCCATGGTCTCAAAGGTGATAGGGACGATTAGATAGGTGTTTTAAGGCCTGAAAGCAATTTATAACATATGAGTCTTATTTTTATTTATAGAAATGTGGAAAGCTTGCTGTAATTCATATTTGAAGTCCTAGTCTGAGTTCTGGTGGGGAATTTAAAAATGCATCCTGGAAATCCTTTAAAGATTTCAGACTTTGAAAGGCCTTGTAGCAGAGGACTTGGTGACTGTATAAAGTTAGTGGTATTCAGGGACAGTGTAGCAAGTAGCTTACAAGGGGACAATTCTGGACTAATGAGAAAGACCTGAAGTGAAGGCTAGAGAGTTGATTTTTTTTTTTTTTGGCATCCTGGAAATGATACAGGAAACATATTAAGATAGATACAGAAATGTGTTCAACCTTCCATCTTGGCTAGTTGTGGCGTTTAGtttgttttttgagacatggtcacgctgtgtcgccaaggctggagtgcagtggtgcgatctcggctggctgcaacctctatttcccaggctcaagcgattctctcacttcagcttcccaagtagctgggactacaggtgttcgccaccatgcccagctaatttttttgtagagatggagttttgccatgtggtcccaggctggtctcaaactcctgagctcaagcaatccgtccacttgccttggctccccaaagtgctgggattacaggcgtgagccaccaggccctgccTGGTTTTCAAATTCAGAAATCTTATTATTTAACCCAGAAGTAATCAGCCCAGTAGTAACTTAGGTTTAATTTTTTTTCAGGTTTAAAAtttttctcatttattttttctgagacggagtttcgcccttttcgcccaggctgagtacagtggtgcaatctcactgcaacctccgccttccagttgcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacgcctggctaatttttgtatttttagtggagatggtgtttcaccatgttggccagactggtcttggactcctgacctcgtgatccacccaccttggcctcccaaagttctaggattacaggtgtgagccaccacgtccggccAATTTTTCTCATTTCTATGCCTCCTATATTAAGGTCTGTGTTGGCACAGATGAGTAACTGCCATGTTCTAGGTCAGTTATACCCAAGCACTTCTGGTGGTTTAAAATGTGATTCTGTAACttttttatttttatttttttgagataatttcactcttgttgcccaggctggagtgcaatggcgtgatcgctgctcaccgcaacctccgccttccaggttcaagcgattctcctgactcagcctctcaagtagctgggattacaagcatgcgccaccatgcccagcttattttgtgtttttagtagagacagggtttctccatgctggacaggctggtcttgaactcccgacgtcaggtgatctacctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcctggccAATTATGTAATTTTTTAAAAAGGACATTTCTATCAGGGATATATACCTTCAGAAATAAGGAAATAGGGGAAAAAAAGAGCACTATAAACCACATGTTTTCATTTCTAGTGCTTCGCTGTAAGTGGCTAGGTTGGTAGAATCAAAAACAAGGGCCAGATGTATTTAAGGGGTATTCAGATGCCACCTACATGCTTATTTTGTCTAGAAcagtgctgtctaatagaactttctgtgacgatggatattttgtagacttttgctgtccagtgtggtagccactaaccacatgtggctgttaagcccttgaaatatagctagtgtgactagaaagtattttattttaaatttacataggcacaagtggctagtggctactgtattgACATTCTGGGTCTAGGACTAGAACCAGTGGTCTGTAACAAAAGTACTTTCTCTTTACTCTATTAAATCTAGAATTAgccgggcatggtcgctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacttgaggtcaggcgtttgagaccagcctggtcaacatggcgaaaccctgtctctacaaaaaacataaaaattagccaggtgtggtggtgggcacctgtaatctcagctacttgggaggctgaggcacaagaatcacttgaacttgggaggtggaggttgcagtgagccaagattgtgccactgcactcaagcctgggtgacgagtgaaactgtctccaaaaaaaaaaaaaaaTCTAGAATTCTTGGAAGTACATTATATTGCCCTTCAGAATAGATTCCAGTTCCTGTTGTGCTCACCTTTATAATTTTACCATAAGTTTTACCTATTCGTAAGTTGGCAGTTTTAGATAGATAACATTCTGGTGGTAGCTAGGGATTTACCTTTTGTCATCCTTTTCCTGCACTTCTCTTGAATTCCTTTATAGATGTACAGTTTTGCTTTAACCACTGAAGATTGCTGTAAATTATAAAGGGTGTGATAGAATCCACATGGCTGTCAAGAAGGAGATCTTACCAAGGACAGTTGACTGACTAGTCTCAGATTGTTTCATATCATTTATACTTGGGTAAGAGTAAACTAGATAActgggcgtcgtggtgcacacctgtagtcccagccactctgaggcaggaggactgcttgtgcccagaagttcgaggctgcagtgtagctgtgattgtgctactgcactccagcctgggcaacagataaaggaaactccatctcttttaaaaaaaaaaaaaGTGGTctgggtgcagtaggtcatgcctgcaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagcttgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatataaaaactagctgggcgtggtggcggcacctgtaattgcagctatttgagaggctgaggcaggagaatcgcttgaacctgggagatgggggttgcagtgagccaagaccgccccatcgcactccagcctgggcaacaatagtgaaactccgtctcaaaaagaaaaaaaGTTTCCTTAGAATGGAAAATATTCATTCATGAGCTCTTTTGGCAATCCGTCATCAGTATATTCTGAAAACCAATAAGATGTTGCCAAGTTGGGGGCGAGAGCTATGTAATGCAAGGCATATGCCTGATGAAGTATACAAATACACCTGACCAGAAACTTTGTCTCCCACATAAGTCTCTTCTAGGCACTGTCGGGGTACATACTGAGCTGCTGCTTTGGCTGTATTTTCTGTGCCTCAGAATAACCATTGTCCTGGTGTTCATATCCTTAGAGTTCAGTACAAAATGTTGGATATCCATTTAATAGGTTCCAGGTTATCTTAGTTGGAGTTTGGGGTATTTGAAAACGTCATGCCTTCAGGCTATCATTTCCCTCAGAAAGCTAAGTAAATTTACTGCATTCATTTCTCAAAGAGTAAAAGTGCAGGTTGTATGTGTCTATGAACATTTAAACATGTTAAAATGTTAAATTTAACATTTTAAATTTAAACATTTAAATATGTCTGTAACTTGAACAGTGTAGTTTCAGAAAGGACCACTGGGCTAGTGTAATGCAGAAAATGCTGGGTCTAGGATTAGGAGAAAATTGTGTTTAGTGTGTATCAATAAacagcccgtggacccaa