Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Mkrn1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name makorin, ring finger protein, 1
Also known as RFP
Coordinate chr6:39374738-39400480
Strand -
Gene summary Enables chromatin binding activity. Acts upstream of or within cellular response to leukemia inhibitory factor. Is expressed in early conceptus and genitourinary system. Orthologous to several human genes including MKRN1 (makorin ring finger protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mkrn1

Retroname Coord Strand Genomic Region ENSG
Mkrn1P1 chr5:111053109-111053813 + Intragenic
 ENSMUSG00000081104 UCSC
Mkrn1P2 chr5:88985657-88987246 - Intragenic
 ENSMUSG00000082389 UCSC
Mkrn1P3 chr7:62068420-62068793 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001311109.1
GAGACCCTCCAAGGGTCCCGGCGAGCTCGGCCGGCCCCGGGGCTCCGAGCCGGGCTATCCGTTTGTAACGTCTTTTCTGCTCTCTGCGCCGCTCACCCCCGCCCCGCCGGGAGCAGCCGCTTTTGTATGCCTTTGTATGTAAGTCGGTGGTCGGCGGTTCCGAGCTTTGTCTCCGAACCGAGCGTTCGGAGCCGGCGTTAGGCTCTTCCACCCTTGGTTTTATGAACTGCCATTATTATTACTGTCCCTTTGAGAGGCGTTCTTCTTTGCGAGAAAGGAGATCCGACCAGAGAGGTTTGGTTCTTGTTTGATACTTTATGCATGGGGTTTGTAAGGAAGGCGATAACTGTCGATACTCTCATGACCTCTCTGACAGTCCATACGGCGTAGTGTGCAAGTATTTTCAAAGAGGGTACTGTGTTTATGGAGACCGCTGCAGATACGAACACAGCAAGCCACTGAAACAGGAAGAAGTGACTGCTACTGATCTGAGTGCAAAACCATCCCTCGCTGCTTCCTCAAGTCTCTCTTCTGGTGTTGGATCACTTGCTGAAATGAATTCAGGCGAAGCTGAGTCACGAAACCCAAGCTTTCCAACTGTAGGAGCAGGTTCAGAGGACTGGGTGAATGCCATTGAGTTTGTCCCTGGGCAGCCCTACTGTGGCCGTACTGCCCCTTCCTGCACTGAAGTACCCCCGCAGGGTTCAGTGACCAAGGAAGAGTCAGAGAAGGAGCCAACTACGGTGGAGACAAAGAAGCAGCTTTGCCCCTATGCTGCAGTGGGAGAGTGTCGCTATGGGGAAAACTGTGTGTATCTCCACGGAGACTCGTGTGACATGTGTGGCCTGCAGGTCCTACACCCAGTGGATGCTGCCCAGAGGTCACAGCACATAAAAtCTTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCTTTTGCTGTTCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGCGAGCGTCGCTTTGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGTATTCGCAAGTGGAGAAGTGCTAAACAATTTGAGAGCAAGATCATAAAGTCCTGCCCCGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGAACTgggtggaggagaaagaagagaagcagaaactCATTCAGAAATACAAGGAGGCCATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGagccacagagacagaaagtgggAACATCAAGCAGATACCGGGCCCAACGAAGGAGCCACTTCTGGGAGCTCattgaggagagagagaacaacccCTTTGACAACGACGAAGAGGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTGCAGGTGGGGACGACGAGCTGACAGACTCTGAGGACGAGTGGGACTTGTTTCACGATGAGCTGGAGGACTTTTATGACTTGGATCTATAGCAGCGTTGCGTGGCGCGGGCACTGGTCTGCGGAGCCTCAGACAGTAGCTGTCCCCTGTGCTGTGTGGCAGTGCGTGTGGCTCTCCTAGGCAGGCCTCTCAAACTCCAGGTGCTGTGATCACTTCCCAGGGCCTGTTCCTCTACCCTCACCTCCCCCAAGAGTGTGTTGTTTTCTCTGTTTCAAAagttacaaaaataaatcttaaagttaGTTTTTTGTAACATGAATTTAACTGTCAGACAGTTAGTGTAGGTTTGTTGCGCCATCTGTCCTCAGCCAGGTTGTGTTCATGGACTTTGCACACTCATTCTGAGACCCCTTTGAGGTTCAAAGGAAAAAGCACTGATTGCTTTGGGGTCCAAGGATAGGGGCAATTGGGAAAAAAGGGACCTAAGTCGCTCTCTGCGCTAGATGTGGGAGGGCTCCCCGAGGTTTCTGGGAGATCTGCACCTTCATGGTTTAGAGCTGTTCCCTGCCCTGTAATCCCCTACATGTGCTTGTCCTGTGGGTTTGGGTTCTTGTTCAGTTGCACGCAAGAAAGACTACTGGGTAACCAGAACCAGGTGCAAATGTGTTGAGGTTAAcctgagaaaaatgtaaaaacacaGGGAGGATGCAGTGGCATTCCATCAGCGCAGAGCTGGCAGCTAACTCCCAAGGGTCGATGGACTTGGTGGGCGAGCACGAGCGAGCATGTGAGCAGCTTCCTTCCCATCTGTGCATAGGTGCAGTATTCTTAGCTTTAGTGGGCAGATGTGGGTTAGTGGTTTCAGCCACATGTGTCGGTAGATCTTAAAGGACCAAGCAGTATGTCAGTAGTTGTTAACGTAGCAGtagctgtctgtctgtatgctAGAGAAACGAGATCAGCTGTAGAGGTTAAACGACCTGCTTGTCCCCCTCTCAGTACAAGCTGGGTCTTGGACACACTGATGTTTTGAATGTTTTACAGTCTAGCCTTTTCAGTCAGGCACTTTTTGGAAAAAACTTTGTCCTCATTTGAGGGGGCCTGTTGTGAGGTTCTGTGCTTGTTTTTGTGGGTATCTGCCTCATTCCATCCCTGAGCTTTGACAGGAAGACAGGTGGATTCCAAACTGAGGTGCTGGTTGTACTAGAGGTATCTGTCGGTTTGCAGAAGTAATGAACCCTTCCCCACCGAAGAAAAGGGAGGGTGCGGCCACCCACGAGGCAAGCAAAAGTTAAGTTGCTAAAATTCCTTGGCGGGAATTTCACCTTTGCATTTTGTTGCTCTCTTTCCTGAAATAACGTGGGAGATGCTCTGATCTGTCCTCTGCTTTGCTTCCGCGGAACTCACCCAGTCTTAAAAACACATCATCATTGCAGAGGCCTCTGTATTTTGCAGCTGCCCTTTTGTAAGAAGCACTTTTCCCAAATAaaacgatttaaaaaaaaaaaaaaaa
>NM_018810.2
cccttcgcTGTCTTCTCCTTCTCAGCCGGACCGGAACTATGTGATCCCGGAAGTTCCGGGGCCATTGCTGTGTGGGATAAACAGTAATGGCGGAGGCTGCGGCTCCCGGAACAACAGCCACAACATCAGGAGCAggagcggcagcggcggcggtggCAGCGGCCTCCCTCACCTCTATCCCCACAGTCGCTGCCCCGTCCCCGGGGGCGGGAGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCGGCTGGACGAAACAGGTCACCTGCAGATACTTTATGCATGGGGTTTGTAAGGAAGGCGATAACTGTCGATACTCTCATGACCTCTCTGACAGTCCATACGGCGTAGTGTGCAAGTATTTTCAAAGAGGGTACTGTGTTTATGGAGACCGCTGCAGATACGAACACAGCAAGCCACTGAAACAGGAAGAAGTGACTGCTACTGATCTGAGTGCAAAACCATCCCTCGCTGCTTCCTCAAGTCTCTCTTCTGGTGTTGGATCACTTGCTGAAATGAATTCAGGCGAAGCTGAGTCACGAAACCCAAGCTTTCCAACTGTAGGAGCAGGTTCAGAGGACTGGGTGAATGCCATTGAGTTTGTCCCTGGGCAGCCCTACTGTGGCCGTACTGCCCCTTCCTGCACTGAAGTACCCCCGCAGGGTTCAGTGACCAAGGAAGAGTCAGAGAAGGAGCCAACTACGGTGGAGACAAAGAAGCAGCTTTGCCCCTATGCTGCAGTGGGAGAGTGTCGCTATGGGGAAAACTGTGTGTATCTCCACGGAGACTCGTGTGACATGTGTGGCCTGCAGGTCCTACACCCAGTGGATGCTGCCCAGAGGTCACAGCACATAAAAtCTTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCTTTTGCTGTTCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGCGAGCGTCGCTTTGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGTATTCGCAAGTGGAGAAGTGCTAAACAATTTGAGAGCAAGATCATAAAGTCCTGCCCCGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGAACTgggtggaggagaaagaagagaagcagaaactCATTCAGAAATACAAGGAGGCCATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGagccacagagacagaaagtgggAACATCAAGCAGATACCGGGCCCAACGAAGGAGCCACTTCTGGGAGCTCattgaggagagagagaacaacccCTTTGACAACGACGAAGAGGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTGCAGGTGGGGACGACGAGCTGACAGACTCTGAGGACGAGTGGGACTTGTTTCACGATGAGCTGGAGGACTTTTATGACTTGGATCTATAGCAGCGTTGCGTGGCGCGGGCACTGGTCTGCGGAGCCTCAGACAGTAGCTGTCCCCTGTGCTGTGTGGCAGTGCGTGTGGCTCTCCTAGGCAGGCCTCTCAAACTCCAGGTGCTGTGATCACTTCCCAGGGCCTGTTCCTCTACCCTCACCTCCCCCAAGAGTGTGTTGTTTTCTCTGTTTCAAAagttacaaaaataaatcttaaagttaGTTTTTTGTAACATGAATTTAACTGTCAGACAGTTAGTGTAGGTTTGTTGCGCCATCTGTCCTCAGCCAGGTTGTGTTCATGGACTTTGCACACTCATTCTGAGACCCCTTTGAGGTTCAAAGGAAAAAGCACTGATTGCTTTGGGGTCCAAGGATAGGGGCAATTGGGAAAAAAGGGACCTAAGTCGCTCTCTGCGCTAGATGTGGGAGGGCTCCCCGAGGTTTCTGGGAGATCTGCACCTTCATGGTTTAGAGCTGTTCCCTGCCCTGTAATCCCCTACATGTGCTTGTCCTGTGGGTTTGGGTTCTTGTTCAGTTGCACGCAAGAAAGACTACTGGGTAACCAGAACCAGGTGCAAATGTGTTGAGGTTAAcctgagaaaaatgtaaaaacacaGGGAGGATGCAGTGGCATTCCATCAGCGCAGAGCTGGCAGCTAACTCCCAAGGGTCGATGGACTTGGTGGGCGAGCACGAGCGAGCATGTGAGCAGCTTCCTTCCCATCTGTGCATAGGTGCAGTATTCTTAGCTTTAGTGGGCAGATGTGGGTTAGTGGTTTCAGCCACATGTGTCGGTAGATCTTAAAGGACCAAGCAGTATGTCAGTAGTTGTTAACGTAGCAGtagctgtctgtctgtatgctAGAGAAACGAGATCAGCTGTAGAGGTTAAACGACCTGCTTGTCCCCCTCTCAGTACAAGCTGGGTCTTGGACACACTGATGTTTTGAATGTTTTACAGTCTAGCCTTTTCAGTCAGGCACTTTTTGGAAAAAACTTTGTCCTCATTTGAGGGGGCCTGTTGTGAGGTTCTGTGCTTGTTTTTGTGGGTATCTGCCTCATTCCATCCCTGAGCTTTGACAGGAAGACAGGTGGATTCCAAACTGAGGTGCTGGTTGTACTAGAGGTATCTGTCGGTTTGCAGAAGTAATGAACCCTTCCCCACCGAAGAAAAGGGAGGGTGCGGCCACCCACGAGGCAAGCAAAAGTTAAGTTGCTAAAATTCCTTGGCGGGAATTTCACCTTTGCATTTTGTTGCTCTCTTTCCTGAAATAACGTGGGAGATGCTCTGATCTGTCCTCTGCTTTGCTTCCGCGGAACTCACCCAGTCTTAAAAACACATCATCATTGCAGAGGCCTCTGTATTTTGCAGCTGCCCTTTTGTAAGAAGCACTTTTCCCAAATAaaacgatt