| Retrocopy Name | Mkrn1P3 |
|
| Species | Mus musculus | |
| Coordinates | chr7:62068420-62068793 UCSC | |
| Strand | - | |
| Parental Sequence | NM_018810.2 | |
| Parental seq. overlap | 289 bp | |
| Parental seq. overlap (%) | 9.8% | |
| Genomic Region |
Intragenic (Ide) |
|
| Retrocopy Summary | Mkrn1P3, located on chr7:62068420-62068793, is a retrocopy of the parental gene Mkrn1. Retrocopies of protein-coding genes, also known as processed pseudogenes, are intriguing genomic elements with implications in genome evolution and diseases. While some retrocopies are non-functional, there are examples of retrocopies (retrogenes) acquiring regulatory roles or exhibiting neofunctionalization unrelated to their parental genes. |
| Gene Name | Mkrn1 |
| Full Name | makorin, ring finger protein, 1 |
| Also known as | RFP |
| Coordinate | chr6:39374738-39400480 |
| Strand | - |
| Gene summary | Enables chromatin binding activity. Acts upstream of or within cellular response to leukemia inhibitory factor. Is expressed in early conceptus and genitourinary system. Orthologous to several human genes including MKRN1 (makorin ring finger protein 1). [provided by Alliance of Genome Resources, Apr 2022] |
| >Mkrn1P3 |
| ATGGAACTCTCTTTTGCTGTGCAGCGCAGCATGGACAAAGTGTGTGGCATCTGCATGGAGGTGGTCTATGAGAAAGCTGACCCCAGCGACCGCCGCTTTGGCATTCTTTTCAGCTGCAACCACACCTACTGTCTTAGGTGTATCCGCAGGTGGAGAAGTGCCACACAGTTTGAGAACAGGATCAGTAAGTCCTGCCCACAGTGCAGGGTCTCCTCTGGCTTTGTCATTCCTAGTGAGTTttgaaacttGTTCAGCAGTATAAGGAGGGGATGAGCCAGAAAGCGTGCAGGTATTTTGCTGGAGGCCTAGGTCACTGCCCATTtggagaattctgtttttacaagCATGA |
| >NM_018810.2 |
| cccttcgcTGTCTTCTCCTTCTCAGCCGGACCGGAACTATGTGATCCCGGAAGTTCCGGGGCCATTGCTGTGTGGGATAAACAGTAATGGCGGAGGCTGCGGCTCCCGGAACAACAGCCACAACATCAGGAGCAggagcggcagcggcggcggtggCAGCGGCCTCCCTCACCTCTATCCCCACAGTCGCTGCCCCGTCCCCGGGGGCGGGAGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCGGCTGGACGAAACAGGTCACCTGCAGATACTTTATGCATGGGGTTTGTAAGGAAGGCGATAACTGTCGATACTCTCATGACCTCTCTGACAGTCCATACGGCGTAGTGTGCAAGTATTTTCAAAGAGGGTACTGTGTTTATGGAGACCGCTGCAGATACGAACACAGCAAGCCACTGAAACAGGAAGAAGTGACTGCTACTGATCTGAGTGCAAAACCATCCCTCGCTGCTTCCTCAAGTCTCTCTTCTGGTGTTGGATCACTTGCTGAAATGAATTCAGGCGAAGCTGAGTCACGAAACCCAAGCTTTCCAACTGTAGGAGCAGGTTCAGAGGACTGGGTGAATGCCATTGAGTTTGTCCCTGGGCAGCCCTACTGTGGCCGTACTGCCCCTTCCTGCACTGAAGTACCCCCGCAGGGTTCAGTGACCAAGGAAGAGTCAGAGAAGGAGCCAACTACGGTGGAGACAAAGAAGCAGCTTTGCCCCTATGCTGCAGTGGGAGAGTGTCGCTATGGGGAAAACTGTGTGTATCTCCACGGAGACTCGTGTGACATGTGTGGCCTGCAGGTCCTACACCCAGTGGATGCTGCCCAGAGGTCACAGCACATAAAAtCTTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCTTTTGCTGTTCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGCGAGCGTCGCTTTGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGTATTCGCAAGTGGAGAAGTGCTAAACAATTTGAGAGCAAGATCATAAAGTCCTGCCCCGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGAACTgggtggaggagaaagaagagaagcagaaactCATTCAGAAATACAAGGAGGCCATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGagccacagagacagaaagtgggAACATCAAGCAGATACCGGGCCCAACGAAGGAGCCACTTCTGGGAGCTCattgaggagagagagaacaacccCTTTGACAACGACGAAGAGGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTGCAGGTGGGGACGACGAGCTGACAGACTCTGAGGACGAGTGGGACTTGTTTCACGATGAGCTGGAGGACTTTTATGACTTGGATCTATAGCAGCGTTGCGTGGCGCGGGCACTGGTCTGCGGAGCCTCAGACAGTAGCTGTCCCCTGTGCTGTGTGGCAGTGCGTGTGGCTCTCCTAGGCAGGCCTCTCAAACTCCAGGTGCTGTGATCACTTCCCAGGGCCTGTTCCTCTACCCTCACCTCCCCCAAGAGTGTGTTGTTTTCTCTGTTTCAAAagttacaaaaataaatcttaaagttaGTTTTTTGTAACATGAATTTAACTGTCAGACAGTTAGTGTAGGTTTGTTGCGCCATCTGTCCTCAGCCAGGTTGTGTTCATGGACTTTGCACACTCATTCTGAGACCCCTTTGAGGTTCAAAGGAAAAAGCACTGATTGCTTTGGGGTCCAAGGATAGGGGCAATTGGGAAAAAAGGGACCTAAGTCGCTCTCTGCGCTAGATGTGGGAGGGCTCCCCGAGGTTTCTGGGAGATCTGCACCTTCATGGTTTAGAGCTGTTCCCTGCCCTGTAATCCCCTACATGTGCTTGTCCTGTGGGTTTGGGTTCTTGTTCAGTTGCACGCAAGAAAGACTACTGGGTAACCAGAACCAGGTGCAAATGTGTTGAGGTTAAcctgagaaaaatgtaaaaacacaGGGAGGATGCAGTGGCATTCCATCAGCGCAGAGCTGGCAGCTAACTCCCAAGGGTCGATGGACTTGGTGGGCGAGCACGAGCGAGCATGTGAGCAGCTTCCTTCCCATCTGTGCATAGGTGCAGTATTCTTAGCTTTAGTGGGCAGATGTGGGTTAGTGGTTTCAGCCACATGTGTCGGTAGATCTTAAAGGACCAAGCAGTATGTCAGTAGTTGTTAACGTAGCAGtagctgtctgtctgtatgctAGAGAAACGAGATCAGCTGTAGAGGTTAAACGACCTGCTTGTCCCCCTCTCAGTACAAGCTGGGTCTTGGACACACTGATGTTTTGAATGTTTTACAGTCTAGCCTTTTCAGTCAGGCACTTTTTGGAAAAAACTTTGTCCTCATTTGAGGGGGCCTGTTGTGAGGTTCTGTGCTTGTTTTTGTGGGTATCTGCCTCATTCCATCCCTGAGCTTTGACAGGAAGACAGGTGGATTCCAAACTGAGGTGCTGGTTGTACTAGAGGTATCTGTCGGTTTGCAGAAGTAATGAACCCTTCCCCACCGAAGAAAAGGGAGGGTGCGGCCACCCACGAGGCAAGCAAAAGTTAAGTTGCTAAAATTCCTTGGCGGGAATTTCACCTTTGCATTTTGTTGCTCTCTTTCCTGAAATAACGTGGGAGATGCTCTGATCTGTCCTCTGCTTTGCTTCCGCGGAACTCACCCAGTCTTAAAAACACATCATCATTGCAGAGGCCTCTGTATTTTGCAGCTGCCCTTTTGTAAGAAGCACTTTTCCCAAATAaaacgatt |
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