Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL50
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L50
Also known as MRP-L50
Coordinate chr9:101387633-101398618
Strand -
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a putative 39S subunit protein and belongs to the L47P ribosomal protein family. Pseudogenes corresponding to this gene are found on chromosomes 2p, 2q, 5p, and 10q. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPL50

Retroname Coord Strand Genomic Region ENSG
MRPL50P4 chr10:59550893-59551893 - Intergenic
ENSG00000235469 UCSC
MRPL50P2 chr2:203314564-203315893 - Intergenic
ENSG00000238285 UCSC
MRPL50P5 chr5:178344816-178346140 + Intragenic
ENSG00000271681 UCSC

Expression

Transcript Sequences

>NM_019051.3
GCTCAGGCCCGTGGATCTCATCGAAGATGGCGGCGCGATCTGTGTCGGGCATTACCAGAAGAGTCTTCATGTGGACAGTCTCAGGGACACCATGTAGAGAATTTTGGTCTCGATTCAGAAAAGAGAAAGAGCCAGTGGTTGTTGAGACAGTAGAAGAGAAAAAGGAACCTATCCTAGTGTGTCCACCTTTACGAAGCCGAGCATACACACCACCTGAAGATCTCCAGAGTCGTTTGGAATCTTACGTTAAAGAAGTTTTTGGTTCATCTCTTCCTAGTAATTGGCAAGACATCTCCCTGGAAGATAGTCGTCTAAAGTTCAATCTTCTGGCTCATTTAGCTGATGACTTGGGTCATGTAGTCCCTAACTCCAGACTCCACCAGATGTGCAGGGTTAGAGATGTTCTTGATTTCTATAATGTCCCTATTCAAGATAGATCTAAATTTGATGAACTCAGTGCCAGTAATCTGCCCCCCAATTTGAAAATCACTTGGAGTTACTAAGCAATTCGGAAGAGAAACACATTGAAATCACTGTCTTTCCCTGAGCAAGGGGGCTGCTCATTAGATCTTTTGATACTTTACCATGTGAAATACTACCAGAACTGTTCTCTAAACCCACTTTTTCTGTAGAGGAATGTATCATCTTTTTTTTTCTCATATTACAAATGGACAAATAACGGACTTTCTATTTTCATATTTGCTGAAACCATTTTTTAAATGAAATTAGGTCATTATTTATGAAAAGTTTTGAGAGGGCACTGTCAACTTGGGTTTAAGACAGGAGGACATTGCAAGTTCACACCTTTCATAAGCATAAAGTAGTTGCAAGAAAGTATTTTCATCCTGTTAGGATTCATATCTAAGATAGAGTTATGCATTGCACATACACAAATAAACTTTTATTAGATAGATACCTATAAAAGAAACATAAAAGTATGTTGTGTATTACTGACAGTTCTAGATTAATTTCTTTTAGAATTAAAGTAGATTTGTTAAAGTGTATTGTGTGTTGTAAATTTTTTAAGTGAAATTTGCTTGCGCTCTGCCTTGCCATTTCTTTCCAGTAAGTATAATTTTGAAAAAATTAGAATATATGCCAAATATTGAGTGCTGTGACTCTTCCTCATAAGAGATGTGCCAGATTCTATGTCTAATTGCATATTCTCTTCAGAGGAGATGATGCTTATTTTAAACCTTTTTCTCTATAACTTTTAAAAAGTGGTGCtgagtattcactagagtggcaagtctttgtgctttaatgcactcaatttgtggaaattacttaaatagcaggttatcagatggttctgaatgacaaaggtgttaaatttgggatttttttttcaagctttagatatggctggagagtaatgagacagaaggaatgtcttatattgttctgactgctgacaattcctaaagaaaagtgatagaagggtttttaacaaaataagttgcatttattctctttcccagggttactcctttgaagagggcaaaattcagttgggaatataaattctggaatcttcatgaagaaaattagtTAACAGTATAGACATGCCCTACAAATATCATCCACAGGCACTTCATTCAAGAACTTCAGGTGTCAGAGTGCCTGGAGCTCTGGAGCTTAGACATTAGAGTTGattccttggggattggttccaggacacctacttggataccaaagtccacagatgcccaagccccttttataaaatgatgtagtatttgcatattatgtatgcacatcctcccatatactttaaatcatctttagattacttatactgaatagaatgtaaatagtatttacaattgtgaatacaatgtattTAGTtatgtaaatatgtaaattttaaagttatgtaaatatgtagctatgtaaataGCTATAAAATAATATTTACAATTGTGAATAGTATGTAAATAGTTGTGAACATAACTATTGTGAATAATATGTTATATGTTATAGTTGTGAATGTAAATAGTATTCACAATTGTGAATACAATGTAAATAGCTTTCACAATTGTGAATACAATGTAAGTAGCTATGTAAATAGTGaatacaatgtaaatagctatgtaaatagttgttatgctgattagggaataatgagaaggaaaaaaagtatacatattcagtacagatgcagtcatctttttttcccctcgaacatttttgatccacaattggttgaatccacagatggggaacacacagTCTTGGTAAATTTAACCAACAAGGAGGGTAAACGCATCCCAACAGGGAAGGTAAActgcacatccatcagtacctctagagggcatcactggtttatagctcaatacagtgactatatcagaataatggcctttagttttcctgaaagattaaattaGGCTTGCTGTTGTTGAATGAGATAATCAAACATATGATGTAATTTTAAAGGGTTTACATACAGAAGGCCTGCTGTATGTCCTGCTTCTGCTGTGTAAAAGATTCAGCATGGAATCATTGGAATTTTATGTACAGGATTTCATTATCTCATTTTCTATACAATTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAAAAACAGTTACAACTGGAGTGGTAACTGCAAAAACCAAGCAGCTTCATGTGATCGTTAGGACAGAAGAAATTTCTCCTTTGTAGCCTAGAGCAATAttctcaaaatttaatgcgcatgttaatcatttggggatcttTTATTCATTTTTtcatgtggggatcttttaaaaatgcaaattctgatttggtaagtctggagtaggtcctgagcttctgcatgcttcaaaagctGATTATGTTTTGAGAACATGGATCTAGATGCTGGTATTGAGGTGGGAGACAAGTACTGCCACCTGAAACAACAGTCTTGGTAAATTTAGCCGACGAGGGTAAACACATCCTAACAGGGAAGGTAAACTGTACGTCCAtcagtaccactagagggcatcactggtttatagttcaatacagtgaatatatcagaataatggcctttagttttcctgaaagattaaattaggcttgctaacttgtttaaTGAGATAATCAGACATATGATGTAATTTTAAAGGGTTTACATTTTTAAAAATTTAATGATTGCTACATAAAAAGGGTATCAGTTAACTAATTTTACTTAGATGGAACTTCTGTAAGCTTAGTAGGTATGCTTAAATAAAGCCTGCTAATAAAATAGAGATTCAGACTCAATAGAATGGTTTTACATATGTAATATATGTTTTAAACTGCATAAAATAAACTCCTCCCTCCTTTC