Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name OGFOD1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name 2-oxoglutarate and iron dependent oxygenase domain containing 1
Also known as TPA1
Coordinate chr16:56451524-56479104
Strand +
Gene summary Enables peptidyl-proline 3-dioxygenase activity. Involved in several processes, including peptidyl-proline hydroxylation; regulation of translational termination; and stress granule assembly. Located in cytoplasmic stress granule; cytosol; and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from OGFOD1

Retroname Coord Strand Genomic Region ENSG
OGFOD1P1 chr13:49210089-49212314 - Intergenic
ENSG00000231665 UCSC

Expression

Transcript Sequences

>NM_001324363.2
GTACCCTCAGGAAGGTAGCGTCTTGATCTGCGTGGCGTGGTTCTGTGCCTTGGGAAGAGATGAATGGGAAGCGGCCAGCGGAGCCCGGCCCAGCCCGGGTGGGAAAAAAGGGAAAGAAGGAGGTGATGGCGGAGTTTTCGGACGCTGTTACGGAAGAAACCTTGAAAAAGCAGGTGGCTGAGGCCTGGAGCCGCAGGACGCCGTTCAGTCACGAAGTCATTGTCATGGACATGGACCCTTTTCTTCACTGTGTGATCCCAAACTTCATCCAAAGCCAAGACTTCTTAGAAGGGCTTCAGAAGGAACTGATGAACTTGGACTTCCATGAGAAGTATAATGATTTATATAAGTTCCAGCAGTCTGATGATTTGAAGAAGAGAAGAGAGCCTCACATCTCCACTTTAAGGAAAATTCTGTTTGAAGATTTCCGGTCCTGGCTTTCTGATATTTCTAAAATTGACCTGGAATCAACCATTGACATGTCCTGTGCTAAATATGAATTCACTGATGCCCTGCTGTGCCATGATGATGAGCTGGAAGGGCGCCGGATTGCCTTCATCCTGTACCTGGTTCCTCCCTGGGACAGGAGCATGGGTGGTACCCTGGACCTGTACAGCATTGATGAACACTTTCAGCCGAAGCAGATTGTCAAGTCTCTTATCCCTTCGTGGAACAAACTGGTTTTCTTTGAAGTATCTCCTGTGTCCTTTCACCAGGTGTCTGAAGTGCTGTCTGAAGAAAAGTCACGTTTGTCTATAAGTGGCTGGTTTCATGGTCCATCATTGACTCGGCCTCCCAACTACTTTGAACCCCCCATACCTCGGAGCCCTCACATCCCACAAGATCCTGAGAAATTCACGAAAGTCTGTGAGGCCTTGGAGCATGGACATGTGGAATGGAGCAGCCGAGGTCCCCCTAACAAAAGGTTTTATGAGAAAGCTGAGGAGAGTAAGCTTCCTGAGATATTGAAGGAGTGCATGAAGTTATTTCGCTCTGAGGCACTATTCTTGCTGCTCTCCAACTTCACAGGCCTGAAGCTTCATTTCTTGGCCCCTTCGGAAGAAGATGAGATGAATGATAAAAAAGAGGCAGAAACCACTGATATCACTGAAGAAGGGACTAGCCATAGTCCTCCTGAGCCAGAGAATAATCAGATGGCCATCAGCAACAACAGCCAAcagagcaatgagcagacagacccagagccagagGAAAATGAAACAAAGAAAGAATCAAGTGTTCCCATGTGCCAAGGGGAACTGAGGCATTGGAAGACCGGTCACTACACTTTAATTCATGACCATAGCAAGGCTGAATTTGCCCTAGACTTAATTCTGTACTGTGGCTGTGAAGGCTGGGAGCCAGAATATGGCGGTTTTACTTCTTACATTGCCAAAGGTGAAGATGAAGAGCTGCTAACAGTGAATCCAGAAAGCAATTCTTTGGCATTGGTCTACAGAGACAGAGAGACTCTGAAATTTGTCAAGCATATTAACCACCGAAGCCTGGAACAAAAGAAAACCTTCCCAAACAGAACAGGTTTCTGGGACTTTTCATTCATCTATTATGAATGACAGCACTGGGCAAAGCTGAACAAAAATGTGACCCTTCGTAATTACTGGGAAGTCTGAAAGAGCTAAGCATGGAGTCAAGGAGAACTACATGGTAGCTTGCCTGACAGTGTTCTTAAAACTGGTTGTCTTTTACTAGGACTCATAATGATTGTCCTCAACCGAGACCTTGAGCTTGCAGCTAAGTACTTATCTCTTGATTAAAAAAAAAAAGTTGGCTTTTTTTTTTTTAACATTTAGTCCTTTTTCCATATTGGCTTCTTCAGTGAATTTTTAAGTTCAATTTGtttttattgaggtaaaatatttataacataaaactgaccagcttacccatttttaaatatgcaattcagtggattaagtacattctcattgttgtccagccatcaccatcatccatctccagaagttttccatcttcccaaattctgtgcccattgaacaataactccccacctccccttcccctagcaacagccataccttttgtctctatcatcaacttcactactcatatttctcatgtaagtggaatcatacagtatttgtccttttgtgactggtttcacttagcataaagtctttaagatgcatccatgttTCCAGTGTTTCGGTTTTTTTAGAAAAACTCATACGTGATTGCAgccgggcatggtggctcacgcctgtaatcccagcacttgggaggccaaggcaggcggatcacctgaggtcaggagttaaagaccagcctgacaaacatggagaaaccccatctctactaaaaatacaaaattagctgggcgtggtggcacatgcctgtaatcccagctactcaggaggctggggcaggagaattggttgaacccaggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaaagaagaaaaaaaCATAAGTGATTGCAGAATTTTGTTCTTCTCATAATTTCTGGTTTAGAAAATTATGGAGCCTTACATCCTGATCATGCTGGGCCTTAGAATTCTGACACAGTGAGTCATCACATTTCCTCCCACTGCCTGTGGCCTTGTTCCACCATGACTCTCACAGTACAGTGTAGGCTTAGTGTAGTATTATTCCCTTGGAAAGGGTCTGGCCTACCATCACATGCCCCAAGAAACTTCTGGTTGGTAAAGAAGATAGGCTGCTTATTGCCATGTGTAGTCACTTCCAAGTGCCCACTGCCTTTCCATCCTGCAATTGTGGCCTGTGTATAATTAAATGATTTTAGCCTCACGTGTTGCTTCTGTTTTCCTAAATACTGTAGGGTCAACTATATAACTAATTGCTTTTTATTTTAAGAGACGGAATGCTAAAACCACATCAGAATGCCAAGAGGCTGTGCATCTTGTTAATTTTTTTCTTGAACTGTTCCAGGGAGTTACATCATAATTACCTGTGTGTGGGTATGCATGGGTGGATGAAAGATGCTGTTCTCATTCCATCCCAATAGAGTCTTCTGTTTCCTTTCTCTTTTTTACATTTATTTTTAGCTTTTGCAGTAGTGTTTAGTGTGGGTTTTACTAATTAATAGAAAAAGCACTGGGCCTTTAAACTTCTTAACTACTCTTCTCTTTCATCTCCTAAAACTTTTGAGTATTCATTCTTTTCTGAAGTTTGCATTTAAATGAAAATGACTTTCGCTTTGGCTTTTAGGTTTAGTTTCAAAAAGGtttaattctgcaccctagccagttaagaaatgttttagcaggtatgcccttgatatggatatttatatattttacacatgtagtaatattatttctataacttactgttataaaacactaatttttaaatgatgagataaaaagaaatatctagaactagttctaacattgtcttcccCTATGCATATGGTAACGAACCATTTTACACCATACTATTTTGGAGACCACAAttttttttgcgtttgagatggagtctcactctgtggcccaggctggagtacagtggcatgatatcggctcactgtgacctctgtctcctgggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggcacctgcctccatacccagctaatttttttatatttttagtagagacagggtttcaccatgttggccaggctggAGACCACAATTTTTTAACCACAGTGTAGCAACACTCAAGTGGGATTGCGAATACTGTTACTAATGGTTAATGTCACAGCTTGCCTTTTCTATATTCCAGCTGACTAaaggtcatctcactcacttgccttctgatgtgttttcatgagttgaggggaaagggTGTCAGTGGCATAACTTCAGGAAGACCCAGGGAAAAGTGCTTGGGTAGGTGAAACTGTCATGTGTGCCAAGCTTGGAAAATAGTTTGAGACTCATGGCTGTAGGCACCATCCAAGGCCAATTTTCCAATTCTGGAAAGCCAAATCTGAATCTTAGAATACCTCACAAGTGTTAAAATGTGCTTTTTAGTGTCTCCTTTATCTCAGTGTGTTTATGATCTGTCAACACATAATCATCTTTTATACACTACAAAAAGGGACTCGGGTGTCTGAGGGGAGAGAATCCCTAGGAGCCCAACTCTGATGTTGCTGTCAGTTACATCATCTACAGCAGCACCTCTTAGATTGTGAAGGATGGTGTAACTTAAAAGATTGTGTTTCTGCACTGAAGATAGATACACAGTGATAGTGAAGTTTGTTTTCCTTATAGTACTTCATTTTGCATCTTGATTGCTTTTTAGGGCCTGGGGCCAATGTCAACAACTCTTAGGTAGCAAAAGAAGAATTAGAACATGGGCATCTTTTTTATACCTCTTTCAGATAAAAGCTATGATGTTCACCTGTAAAA