Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name cox5aa
Plot displaying the genomic locations of a parental gene (in chr25) and its retrocopy(ies). Each line represents a retrocopy.
Specie Danio rerio
Full Name cytochrome c oxidase subunit 5Aa
Also known as cox5a|wu:fj32b09|zgc:109989|zgc:114165
Coordinate chr25:29075145-29080128
Strand -
Gene summary Enables cytochrome-c oxidase activity. Acts upstream of or within embryonic organ development and spinal cord motor neuron differentiation. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex IV. Is expressed in several structures, including adaxial cell; alar plate midbrain region; immature eye; musculature system; and nervous system. Used to study ciliopathy and visceral heterotaxy. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Orthologous to human COX5A (cytochrome c oxidase subunit 5A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from cox5aa

Retroname Coord Strand Genomic Region ENSG
cox5aaP1 chr3:47756953-47757206 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001024403.2
TGTAGTGTTAGCATCTCGGCTATCTGAACTAGCCTCAACCTGAGTCTCTCTCGTTCTTCAATCCGAGCTACGCTTGAGCCCGGTGAGCCGCACTATGTTCCGAGCCGCCCTTCGACTGTCATTCTCCGGTGCTCGGAGTTTAGCAAGGTCACGGCCACAGTATACAGCATCAGTAGCTGCTCGCTCTTATTCCCATGGCAAACAGGAGACGGATGAGGAGTTTGATGCCCGCTGGGTCACTTACTTCAGCAAGCCAGACATCGATGCTTGGGAGTTGAGGAAAGGAATGAACACTTTGATCGGTTATGACTTGGTACCTGAACCAAAGATCCTGGATGCAGCACTCAGAGCCTGCCGGAGGTTAGACGATCTGGCCAGTGCCATCCGGATTCTTGAGGCAGTCAAGGATAAAGCTGGCCCACACAAAGAGATCTACCCTTACGTTATCCAAGAGCTGCGGCCCACACTTGATGAGCTTGGTATTGCTACACCTGAAGAACTTGGCATTGACAAAGCATAGATGTCTACGATTGTGAGTCTTCCAGGAGACTGCTGCTCTTGCCTGGACTGAGAGACCACTGTACTTGAAGTCTTTGCCTCATGTCATGGTGTTTGTGTTCTATTTAATTGGCCTTTATTATGTTCTTTTGCTTGTAAAATATTGATGACCTAATAAAGGGAGATATATCTTTA