Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name PSMA2
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name proteasome 20S subunit alpha 2
Also known as HC3|MU|PMSA2|PSC2
Coordinate chr7:42916861-42932174
Strand -
Gene summary The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a member of the peptidase T1A family, that is a 20S core alpha subunit. [provided by RefSeq, Jul 2008]

Retrocopy(s) from PSMA2

Retroname Coord Strand Genomic Region ENSG
PSMA2P1 chr11:87329213-87330035 - Intergenic
 ENSG00000254582 UCSC
PSMA2P3 chr2:202179278-202180469 + Intragenic
 ENSG00000227890 UCSC
PSMA2P2 chr8:93939302-93942893 - Intergenic
 ENSG00000251234 UCSC

Expression

Transcript Sequences

>NM_002787.5
GGCTCTTCGGGTAAAGATGGCGGAGCGCGGGTACAGCTTTTCGCTGACTACATTCAGCCCGTCTGGTAAACTTGTCCAGATTGAATATGCTTTGGCTGCTGTAGCTGGAGGAGCCCCGTCCGTGGGAATTAAAGCTGCAAATGGTGTGGTATTAGCAACTGAGAAAAAACAGAAATCCATTCTGTATGATGAGCGAAGTGTACACAAAGTAGAACCAATTACCAAGCATATAGGTTTGGTGTACAGTGGCATGGGCCCCGATTACAGAGTGCTTGTGCACAGAGCTCGAAAACTAGCTCAACAATACTATCTTGTGTACCAAGAACCCATTCCTACAGCTCAGCTGGTACAGAGAGTAGCTTCTGTGATGCAAGAATATACTCAGTCAGGTGGTGTTCGTCCATTTGGAGTTTCTTTACTTATTTGTGGTTGGAATGAGGGACGACCATATTTATTTCAGTCAGATCCATCTGGAGCTTACTTTGCCTGGAAAGCTACAGCAATGGGAAAGAACTATGTGAATGGGAAGACTTTCCTTGAGAAAAGATATAATGAAGATCTGGAACTTGAAGATGCCATTCATACAGCCATCTTAACCCTAAAGGAAAGCTTTGAAGGGCAAATGACAGAGGATAACATAGAAGTTGGAATCTGCAATGAAGCTGGATTTAGGAGGCTTACTCCAACTGAAGTTAAGGATTACTTGGCTGCCATAGCATAACAATGAAGTGACTGAAAAATCCAGAATTTCAGATAATCTATCTACTTAAACATGTTTAAAGTATGTTTTGTTTTGCAGACTTTTTGCATACTTATTTCTACATGGTTTAAATCGACTGTTTTTAAAATGACACTTATAAATCCTAATAAACTGTTAAACCCACCTTCCAGCCTTTTAGGAGTTGCTAAAATTTTAACAGTTATTTCCTGCTTTTTATCACAGTTGATTTCTGAAGACTACATTGCCAAGCAGAATGATGAAATGACTTTTTCGTTGTCAGGCAATTTTGGTTAAGTCAAATCTTAATGCCCTCTTCGCTATCAGATGTTGCCTGTGTTTCCATAAAGCAAAATGCTGATTTTGGTAAAAAACATGACTGCTTCTAGAGCTGGGAGGATCTGCAGACTTTCACGGATTCATGGAACAAGAAAAGAAGCATAGGTACTTTTAGGTGCCATTAGGTATTGATCAGTGAAATCCTAGGGTGCTCTATGAGATTGTACTAGGCCTATGAAGAGTGGTAAGCCAAATAGGTCTCCATGGGAGATACATTATGTAAATAAATAAACAATGGTTTGCTGGTTCCTGTTGGTGTCTCCACAAGTAGGTAAACATGTTTAAAGGAACCCGGGTTCTTAGATTTTGTTAGACTTTTTAAACTCAAGGATGAGCATAAGTGCTTGAAATAAAATGCTAATACTTAAGTGTCAAAA