Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PSMD8
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name proteasome 26S subunit, non-ATPase 8
Also known as HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31
Coordinate chr19:38374571-38383824
Strand +
Gene summary The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a non-ATPase subunit of the 19S regulator. A pseudogene has been identified on chromosome 1. [provided by RefSeq, Jul 2008]

Retrocopy(s) from PSMD8

Retroname Coord Strand Genomic Region ENSG
PSMD8P1 chr1:154414275-154415187 - Intragenic
ENSG00000228264 UCSC
PSMD8P2 chr18:856526-857421 + Intergenic
ENSG00000264179 UCSC

Expression

Transcript Sequences

>NM_002812.5
GAGTGACGACAGAGGCGGAGCTCCAACTGACATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGAGAGCGACGGCGGGCTACCCGGGGCGGGCTGAGGCAGGTTGTAGCCCCGCCCCGGGCCTTGGGCTCCACCTCTCGGCCCCACTTCCGCCGGGCAAGCGTTTGTAGGCGGCGCTGCCGTAAATCAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTTCTCGAGCTCCGGGCCCGCGGCAACCTCGGGCGCTGTTCTGCAGGCCGCGACCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGTAAAAGCCCCAATCTTAGCAAGTGCGGGGAAGAGCTGGGTCGACTCAAGCTAGTTCTTCTGGAGCTCAACTTCTTGCCAACCACAGGGACCAAGCTGACCAAACAGCAGCTAATTCTGGCCCGTGACATACTGGAGATCGGGGCCCAATGGAGCATCCTACGCAAGGACATCCCCTCCTTCGAGCGCTACATGGCCCAGCTCAAATGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGCCTATATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTCCACACGGAGTTGGAGCGGCTGCCTGCCAAGGACATACAGACCAATGTCTACATCAAGCACCCAGTGTCCCTGGAGCAATACCTGATGGAGGGCAGCTACAACAAAGTGTTCCTGGCCAAGGGTAACATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCTCGACACTATCAGGGATGAGATCGCTGGGTGCATCGAGAAGGCCTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCTTCAACACACCCAAAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCCAGCCAGCAGCAGAAGCCGGAAGACACCACCATTCCCTCCACAGAACTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCTGGAGATGATCGTCTGAGCCCCCCGGGCACTGGGTGGGGCAGGGCACGAGTTATTTAAAACAGTTACACTGCAGGGTTTCGCCCAATAAAGGTGGACTGACATTCCCTCTTCCAGGCCCTTGTCTCCCCAGTTGGGACGGCAGAGAGACAAGTTCTTATATCTGAAGAACTTGGAGGTTTTGGGGCATTCAGGAGTTGGAGATAGCCTCCAACTGGGTCAGCCTCTGTCTGGTGGGCATTGCTCAGGGTCTCAAACATGGACGCCCACTGTGGGGCCCCAGCAGCACTGTGGCCTGCAGGAGGGCATGGCCCCAGGTAGGGGGACTGTTCTAGCCAGCTGTGGACACATAGGAATGCTGGACCAGGGTACCAGATTTTTTCAACAAAGGGGGTGAAGTGTCCTACTAAAAAGAATAAATGTTGGCAGTGAATTAAACAATTTTTCAAATGA