Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Shawl
Plot displaying the genomic locations of a parental gene (in chr2L) and its retrocopy(ies). Each line represents a retrocopy.
Specie Drosophila melanogaster
Full Name Shaw-like
Also known as CG13111|CG34366|CG4450|DmelCG34366|Dmel_CG13111|Dmel_CG4450|Kv3|Kv3.2|shawl
Coordinate chr2L:9370309-9415156
Strand -
Gene summary Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in axon; dendrite membrane; and neuronal cell body membrane. Predicted to be integral component of membrane. Is expressed in adult head. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 7 and spinocerebellar ataxia type 13. Orthologous to several human genes including KCNC1 (potassium voltage-gated channel subfamily C member 1); KCNC2 (potassium voltage-gated channel subfamily C member 2); and KCNC3 (potassium voltage-gated channel subfamily C member 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Shawl

Retroname Coord Strand Genomic Region ENSG
ShawlP1 chr2L:3722975-3723241 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_135440.2
GTGGACGTGCGTGCGGCAAGAACCTGCTGGTAAAGCCTCGGAAAGGACCTGGTTAATGGTTTACGGTTTTGGCTACTGATTCCTGCTAACTGGCTAGTGTGGCGGACAGACGGCAGGATCTGTGGATTGCTGCGAATGTGCCAATATGTCAGCGCCGCgtatgtgggtgtgtgagtgagtgtgtgggtgtgAGACAGTGTCCTTGGGCGGACTAACAGGTTCCCCGTCTTCCCAAGTGTTAAAGTGCGGCCAAAAGTTTTTCGTGGTAAAAAAAAAAAATACGATAAAAAGTCTTAAATCTGCTGTCGCCTCTGATTTAAGCTGAAAGTTTGCCTGAAGGATTAAAAAAGCCATTTCGGACTTGTCATAGTCAAAGGACAACGAGTTGCCGTGGGCCAAAAGTGTATAAGGAATGGGAGAAGTAAGGTAGAGCTAAAACCATAAACCCAAACGAACAAGCTCAGCTCTGAGTGCAAAAAAAACACAAGAGGAAGAGAAAGTACATCCTGCGCCCAAGTCTAATTAGAAGAATCGCGCTGCGGCAACAGATTGCTCATACGCCGTGTGGATCGCGAGTGTTTTAGTGTCCGTGTAAACATAAGTACATATGTGCGTGTGACCCTATTTTGTGAAATCTGAAACAGAAAACTCCTCAAAAACCATTCGAGAGGTGTTAAAGTTTTTGTTCGATTTGCTGGCGGGCCGTCGAAGAATTAGTTTGGCATGCGGCTGCTGTTGCCACAACTGTTGCATGCAACATGGATGGCGAAAATCGGATCATACTCAATGTGAGCGGAATAAGATATGAAACCTATAAGGCCACGCTCAAGAAAATCCCCGCAACACGTCTCTCCCGACTGACCGAAGCCCTGGCCAACTATGATCCGGTGCTCAATGAATACTTTTTTGATCGCCACCCCGGGGTCTTCACCCAAATCCTCAACTATTACAGAACTGGAAAACTGCACTATCCAACTGACGTGTGTGGTCCGCTTTTCGAGGAGGAGCTGGAATTCTGGGGACTCGACTCAAATCAGGTAGAACCTTGCTGTTGGTCAACATATAGCATACATCGCGATACGCAAAACACCTTAGCCATATTAGATAAGCTAGATATTGAAAATGAAAAGCCCACGGAGGAGCAGATAGCTCGTCTATTTGGTTTTGAGGAGGCACTGAGCAACGGCGAGCTTAACTGCTGGCAGCGTATAAAACCCAAGATCTGGGCCATGTTCGATGAGCCATCCAGCTCCACGGGTGCCAAGATCGTTGCTGGCATGTCGGTTTTCTTTATATTTGTTTCTGTGATATCATTCTGCCTGAAGACCCATCCCGGCTTTCGTGTCGATCTGCCCTCCGGAGCCCACGATGCCCACGGGCCAGGAGCGGGTGGTCCACCCCACGGACACGATCCCATGGGAGAACCACCGCAGACCCATCAGTATCATCAGCACAGCATAACGCCGCCCAGCGGCAGCATCGGACCCACCTTTCGTGTCACAAACTACACGAGCTACAGCAGCGGTAACTTTACCGCTTCTGGCCAAGCCACGCCCATTGCCACCATTAAGGGCGGCCAGCGGCAGCGACTGAAACGGAATATCAACGGAAGTATCCTCAACGAGTTTATCGAAGAGAAGATATTGGGCCATAATGGGAGGAGAAAACACGGATGGATTGAGACCTATGGGCAGCCACACGAGGCCTTCTTCTACGTGGAACTGGTCTGCAACGTCTGGTTCTTCATCGAGGTCATCATCAGGCTGATTGTCTCCCCTAATTTGTGGCAGTTCATAAAGTCGCCGGTCAATATTATTGATTTTACGGCCACTTTGAGCTTTTACACGGACGTAATGCAGCGCATGGGTGAATATACGGGTCTTCTGGAGGCCTTTTCCATCGTCAGGATTATGCGACTGTTCAAGCTGACTCGCCATTCACCGGGCCTGAGAATCCTCATCCACACATTCAAGGCTTCGGCCAAGGAGCTTACTCTGTTGGTGTTCTTCCTCGTCCTGGGCATAGTTTTCTTCGCCAGTTTGGCTTACTATGCGGAGAAGTTGCAGGACAATCCGGACAACCAGTTCAAGAGCATACCTTTGGGTCTGTGGTGGGCCATTGTGACCATGACCACCGTGGGATATGGCGATGTGGCGCCCAAGACCTATCCGGGCATGTTCGTGGGTGCCCTCTGTGCTCTAGCCGGTGTGCTGACCATCGCCCTGCCCGTGCCCGTCATTGTCAGCAATTTCTCCATGTTCTACTCTCACACTCAGGCTCGCTCCAAGCTGCCCAAGAAGCGACGACGTGTCCTGCCGGTGGAGCAGCCGCGCCGCAAGAGGGAGCCAACTGCTCCGCATCGCGGAAGGACGAACGCCATCAAACAGACGCCACCCACTGGGCCGGGATTGGTGGCCGGTGGTGTGGTTCCAGTGGGAGCAGGAGGGCCGGGACTCGGTGGTCATGCGGTGGGTCATTCTGCTGCAGGGGCGCCAATGTTTAAGGACGCATTCGGCGGTGCCAAAATCGCGGACTACTTGAGCGTGCCGGCGGTGCAGAGCCTCCAGCCGCGGGCGGCGACGACTGGCCACGACTTCATGCTGCCGCTCCAGCCAAAACTTCTGGGCCCCCTGGAACGCAAGGATCAGCATCCGCTGCAACTGACTGCCCACAATTTGGCCTCGGACACGCACCAGCTGATGTACTCGGGCCACGCCCACTCGCAGCACAAGGTGGGCGGTGGGGCAGCGGTGCTAAATGTGCCGCCCACGTTGAGCATGTCGCACACCCAGATGCCACCCGGAATCGCCAGCATGGGTCAGCGGACGCCAAATCTGAGTTTTCGGCCCGCTCACGGGGCGTCGTCCCAGGTGGCCACTGTCCAGCAGCCCATTCCGCACTCCCATGCCTGCCACGCCTCCACGAATTGCAACATCAAGATTTCGGTTGCCTCCGCCGGTCTTTCGGTGGGATGTCCGGATGAGTTTCGGACTCCCAAGGTGACGCTGCTGGACGATCTCAGCGACGATGTCAACTCCTCGACGGATGACTGCGGGGACTGTTGTCTGGTGGACGACAGCGATACCTACGAGGGAACCACCATCAACAATGGTCCGAGTGGACAGGAGAACGGAACGGAAGCCATTGGGCTGGATGATGGCCTTCTGGATAACGATGGTGAGGATGAGGAGGACGGCGAGGGCAGCGGTGTGGGCGGGGATAGCGGCGATAGTCTCGGAGGGATCTACATTGGTCCCAGGCATTGATTGCCGGACATTAGCTGGGATTTCCACAACTGAAACGGACTTACCAACTTCTGACAGTACTGCCTAAAAAAGCTCTAAAACTGCGGTAAAAGTAGGGAAAAGGATTAAAGTTGGAAGATTTTTAGAGTATGTATAATGTGAATGAATGGTTTAACTGCTGAATGCAACTTTATCTGGCTAAAATTTTTAGAAACTTTAAAGCCAAGGTCAATCATACACAAGCCAATTTCATTGCCATTGGTCACTTAAACTTTCCGTATCTCTATTACTTTTATTAAATTCAGCTATTGCAGTTATTCCAAAGTTCTTTATTTCTATAATCTTCTTAAAAACATATAAAAGTTAAGGTCGTGGAAAGTAAATACTTTAAGTTCAAGTGTCATAGGAATTAAGAATAGCAAAGTTGGATAAGTATTTTCAAACGTCCACTTAAGAAAAACTATTAGAAAAATCATGTTCTCAAATGTTTAACGGAATCAGAGATTTTAAAGTCGTAACGAAGAGTTTTTAATGCTTATTTCAAAGTTTTCGAAAAGAAGATTGTGAAGATCACTGCCTCTACGATTGTAAACTTCTCAAATTAAATTTTATGGCACTGAGATAATTATCCATTAATTTTAAGATGGGACACATACAGTTTGCAACCATTTATCAGGACTTTTAATCAATCTTTGCTTTCTACTTACGCCAAGCAGTAAACAACATTCCTTGTCCGGCCAAGACAAACATCCGTAACATTTGTATCAGTGTCCTTATAACTGTCATGTTGACAACTGTCATTGGCAGCGTGCATGGAGGATTGTTTGCGTGCGTATGTGTGTGCAGCCGGGCACGTCCTGGCAAGGTCCTGCAAACAAAGGAAGAGTGAGTCTGCAAATGGACGGGGGTCAGAAGAGAAGCTACCCGCATACAAGGCAAACATATCGTCCACATAAATGTGACCACTTGTGTGCAGACAGTCAGAGATAGAGCACCGCCCACTTTCGCCCATTTCCCAAGCACTCCCATTTTCCTGTCCCGTCAAGGTGTTTATTGTGCAAATCTTGGGGCAAGAATTGCATGGCCAACTATAAATTCCCACACTTGACTCTCACGCTCCGTTTGCCCGGATCAGACCCTGAATCATGGCCAAAAAGTGTCATCGGGCTTGTTTATCTGACACATTGACTGCCACCATTTCAATGAACTGGCGAGCAAAAACTGTGTCGACAAGACGCACACAAAAGGCGACGACGACATCCAAAAACTAAAACGGCGACGACATTCGTGTCCTTGCTTTCCTGAcccatcccattccataccatccgatccTTACAGCAACCCACTTCCACCCAGCGCGATGGAGGTTTGTGTGGTTGACCTTGTAAATAGTTTTTTTTTTTTGGGGTCGCTGTGTTAAGTTTTCACTCTTCGACATTTATTTCCATAAATGTTAATTGATTTTTGCATGGATGCTGAAAAATGAATAAGCTGAACTCAAGGAAATGTAAATATTTGGGCATGACGGTCAAGAACTAACCAAATGAAAACGAAACTGAACATAAAGAAAGACAGTAGCAAACATATTTGACTTTAAATAAGGTTCAATGGTAATTTTTGGTCCAATATTTATAGTTTTTGATGTGCTAAAAACGATAAAATGACGAACAATTTTGATTCAGATAAGTAAGAAGGGGCTTTAGAAGTACAAAGCTCCTTAAACCACACCTTCTTGTAAGTCTAGGTGGAAAATAGATGGAAATGTAGATTTAAATAGATATCATGCCCAAACAATGAGGTGAGGGAGGTGATTCCAATTAGTCAGTAAAGTAAAATCCGCTGGTCTGAGTGTGCGTCGTTTTAAATTTAATCTTTATTACTTAGCTAATCTCTGATAAAAAGTTAAATAATTGCCTAATTGTTGTGTAAGGGTATTCCCGGAATCGACTTGCCGATTACACCTTTTTTCTCATTAAGATATGGATTCATTACTTTAAATTGTATAAGAGGAATGTTGCTTTAAATACTGTTCAATTTAGAAAAAAAACACATATTTTCTTATATTACAAAACAAAAATTTGATGTTGCGAAAATTCCGAAGAGTATATAAATATGTATTGTTAATTCGTGACACACTTTTTAAATAAAAGTTACATTTAAATACTTTTACATAATCTTAAATGAGAAAGGAAATGAATCTTTTGATATAAAAGATACTGCTGCGAACCAGTGCTCGTTGAAATAAGATCGTTTCAATAGAAATATAGTTAGTTTAAAAAACACAAGTGAGATACTAAACTAATATTAAACTTTTGCCTAGCAAATAACTAAGTTTAGACCGGTCAATGCAGAATAAAATATTGCATACAGAAGTTGATTGAAGAACTAAATCCTTTTGAAAGAAATCACCCACCATAGACAGGAAACAAGAACCCGGCTGAAAGTAAATTAAAAGAATTTTGGAAGCATAATCTGTGTGTATATAGATAATCTCAAGAACAACCTAAATTTCATTAGTTAAATGTCGAAAAAGCAGTAAAAACACATTTCTACAATATTTACTGTAAGTAAAGTGTCAAGAACAAAAAGGAAAACCAAAACTGTTTACAAGCAAAGCGAATTTTTAAATGTTGAAAAAATGAGATCCGGAAAAGTAAACGATAAATAAGCAAAAAAAAAAATGTGGTGTGCAAAGAAAAATTAAATTTTAACAAAAATAAAAATTCTTTGAAAAAGC